RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W YOR352WQ08816 343 aa1.67□□□□□ -2.14
SPC110YDR356W SNU66Q12420 587 aaPredicted RBP1.67□□□□□ -2.14
SPC110YDR356W TMA7Q3E764 64 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W RRP5Q05022 1729 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W SPP41P38904 1435 aa1.67□□□□□ -2.14
SPC110YDR356W EDE1P34216 1381 aa1.67□□□□□ -2.14
SPC110YDR356W RAV1P47104 1357 aa1.67□□□□□ -2.14
SPC110YDR356W SEN2P16658 377 aa1.67□□□□□ -2.14
SPC110YDR356W FUR1P18562 216 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W VPS34P22543 875 aa1.67□□□□□ -2.14
SPC110YDR356W PGS1P25578 521 aa1.67□□□□□ -2.14
SPC110YDR356W BUD14P27637 709 aa1.67□□□□□ -2.14
SPC110YDR356W DBF4P32325 704 aa1.67□□□□□ -2.14
SPC110YDR356W DAL1P32375 460 aa1.67□□□□□ -2.14
SPC110YDR356W DPH5P32469 300 aaPredicted RBP1.67□□□□□ -2.14
SPC110YDR356W PTC3P34221 468 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W MAL31P38156 614 aa1.67□□□□□ -2.14
SPC110YDR356W EXO84P38261 753 aa1.67□□□□□ -2.14
SPC110YDR356W HSM3P38348 480 aa1.67□□□□□ -2.14
SPC110YDR356W SRP72P38688 640 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W SET1P38827 1080 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W CAJ1P39101 391 aa1.67□□□□□ -2.14
SPC110YDR356W UTP18P40362 594 aaPredicted RBP1.67□□□□□ -2.14
SPC110YDR356W FAF1P40546 346 aaPredicted RBP1.67□□□□□ -2.14
SPC110YDR356W NCS6P53088 359 aa1.67□□□□□ -2.14
SPC110YDR356W GTR1Q00582 310 aa1.67□□□□□ -2.14
SPC110YDR356W PKH1Q03407 766 aa1.67□□□□□ -2.14
SPC110YDR356W ATG16Q03818 150 aa1.67□□□□□ -2.14
SPC110YDR356W ECM11Q04110 302 aa1.67□□□□□ -2.14
SPC110YDR356W VTI1Q04338 217 aa1.67□□□□□ -2.14
SPC110YDR356W SPO20Q04359 397 aa1.67□□□□□ -2.14
SPC110YDR356W KRE28Q04431 385 aa1.67□□□□□ -2.14
SPC110YDR356W YLR257WQ06146 321 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W MDM36Q06820 579 aa1.67□□□□□ -2.14
SPC110YDR356W CDC53Q12018 815 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W MAM3Q12296 706 aa1.67□□□□□ -2.14
SPC110YDR356W TAF2P23255 1407 aa1.66□□□□□ -2.14
SPC110YDR356W TRM3Q07527 1436 aa1.66□□□□□ -2.14
SPC110YDR356W MET6P05694 767 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W CDC16P09798 840 aa1.66□□□□□ -2.14
SPC110YDR356W CLC1P17891 233 aa1.66□□□□□ -2.14
SPC110YDR356W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SPC110YDR356W PEP7P32609 515 aa1.66□□□□□ -2.14
SPC110YDR356W GLC3P32775 704 aa1.66□□□□□ -2.14
SPC110YDR356W YME2P32843 850 aa1.66□□□□□ -2.14
SPC110YDR356W YBL036CP38197 257 aa1.66□□□□□ -2.14
SPC110YDR356W PAF1P38351 445 aa1.66□□□□□ -2.14
SPC110YDR356W RFC1P38630 861 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W RRP8P38961 392 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W ENP2P48234 707 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W SDA1P53313 767 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W YNR061CP53747 219 aa1.66□□□□□ -2.14
SPC110YDR356W JJJ1P53863 590 aa1.66□□□□□ -2.14
SPC110YDR356W PTA1Q01329 785 aaPredicted RBP1.66□□□□□ -2.14
SPC110YDR356W HPC2Q01448 625 aa1.66□□□□□ -2.14
SPC110YDR356W CTF4Q01454 927 aa1.66□□□□□ -2.14
SPC110YDR356W GDE1Q02979 1223 aa1.66□□□□□ -2.14
SPC110YDR356W HED1Q03937 162 aa1.66□□□□□ -2.14
SPC110YDR356W YLR271WQ06152 274 aa1.66□□□□□ -2.14
SPC110YDR356W IRC3Q06683 689 aa1.66□□□□□ -2.14
SPC110YDR356W RKM1Q08961 583 aaPredicted RBP1.66□□□□□ -2.14
SPC110YDR356W TRM8Q12009 286 aa1.66□□□□□ -2.14
SPC110YDR356W AIM7Q12156 149 aa1.66□□□□□ -2.14
SPC110YDR356W NUP145P49687 1317 aa1.66□□□□□ -2.14
SPC110YDR356W TY1B-AO13527 1196 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W CDC19P00549 500 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W THS1P04801 734 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W PMS1P14242 873 aa1.66□□□□□ -2.14
SPC110YDR356W POL3P15436 1097 aa1.66□□□□□ -2.14
SPC110YDR356W RAD53P22216 821 aa1.66□□□□□ -2.14
SPC110YDR356W TRX1P22217 103 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W PUF4P25339 888 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SPC110YDR356W VPH1P32563 840 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W SEC6P32844 805 aa1.66□□□□□ -2.14
SPC110YDR356W VPS24P36095 224 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W PAM1P37304 830 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W PBY1P38254 753 aa1.66□□□□□ -2.14
SPC110YDR356W VMA22P38784 181 aa1.66□□□□□ -2.14
SPC110YDR356W NMD3P38861 518 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W VPS45P38932 577 aa1.66□□□□□ -2.14
SPC110YDR356W GEM1P39722 662 aa1.66□□□□□ -2.14
SPC110YDR356W RIO2P40160 425 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W XKS1P42826 600 aa1.66□□□□□ -2.14
SPC110YDR356W IML2P47031 731 aa1.66□□□□□ -2.14
SPC110YDR356W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SPC110YDR356W MSN5P52918 1224 aa1.66□□□□□ -2.14
SPC110YDR356W PEX14P53112 341 aa1.66□□□□□ -2.14
SPC110YDR356W EFM5P53200 248 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W CAF130P53280 1122 aaPredicted RBP1.66□□□□□ -2.14
SPC110YDR356W HST1P53685 503 aa1.66□□□□□ -2.14
SPC110YDR356W HST2P53686 357 aa1.66□□□□□ -2.14
SPC110YDR356W SNZ1Q03148 297 aa1.66□□□□□ -2.14
SPC110YDR356W RRB1Q04225 511 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W PUF6Q04373 656 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W ADE13Q05911 482 aaKnown RBP1.66□□□□□ -2.14
SPC110YDR356W NDL1Q06568 189 aa1.66□□□□□ -2.14
SPC110YDR356W ARR1Q06596 294 aa1.66□□□□□ -2.14
SPC110YDR356W VAC14Q06708 880 aa1.66□□□□□ -2.14
SPC110YDR356W APL4Q12028 832 aa1.66□□□□□ -2.14
SPC110YDR356W APC2Q12440 853 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms