RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	ADI1	Q03677	179 aa		3.72	□□□□□ -1.81
TFB1	YDR311W	FLC1	Q08967	793 aa		3.72	□□□□□ -1.81
TFB1	YDR311W	FAL1	Q12099	399 aa	Known RBP	3.72	□□□□□ -1.81
TFB1	YDR311W	ERR1	P0CX10	437 aa		3.72	□□□□□ -1.81
TFB1	YDR311W	ERR2	P0CX11	437 aa		3.72	□□□□□ -1.81
TFB1	YDR311W	EEB1	Q02891	456 aa		3.72	□□□□□ -1.81
TFB1	YDR311W	BAS1	P22035	811 aa		3.71	□□□□□ -1.82
TFB1	YDR311W	MRPL16	P38064	232 aa		3.71	□□□□□ -1.82
TFB1	YDR311W	ISW1	P38144	1129 aa		3.71	□□□□□ -1.82
TFB1	YDR311W	RSP5	P39940	809 aa	Known RBP	3.71	□□□□□ -1.82
TFB1	YDR311W	CHZ1	P40019	153 aa	Predicted RBP	3.71	□□□□□ -1.82
TFB1	YDR311W	NUT1	P53114	1132 aa		3.71	□□□□□ -1.82
TFB1	YDR311W	EMG1	Q06287	252 aa	Known RBP	3.71	□□□□□ -1.82
TFB1	YDR311W	RTT10	Q08924	1013 aa		3.71	□□□□□ -1.82
TFB1	YDR311W	RPC31	P17890	251 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	KAP122	P32767	1081 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	MDJ1	P35191	511 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	GIP1	P38229	639 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	YBR184W	P38299	523 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	UBP12	P39538	1254 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	ICP55	P40051	511 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	YFL066C	P43538	392 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	DNM1	P54861	757 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	KAR2	P16474	682 aa	Known RBP	3.7	□□□□□ -1.82
TFB1	YDR311W	THI4	P32318	326 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	YEN1	P40028	759 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	MSH4	P40965	878 aa	Predicted RBP	3.7	□□□□□ -1.82
TFB1	YDR311W	YGR125W	P53273	1036 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	MRL1	Q06815	381 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	YLR125W	Q12138	136 aa		3.7	□□□□□ -1.82
TFB1	YDR311W	SWE1	P32944	819 aa		3.69	□□□□□ -1.82
TFB1	YDR311W	AIM46	P38885	310 aa		3.69	□□□□□ -1.82
TFB1	YDR311W	XKS1	P42826	600 aa		3.69	□□□□□ -1.82
TFB1	YDR311W	GNP1	P48813	663 aa		3.69	□□□□□ -1.82
TFB1	YDR311W	MTC5	Q03897	1148 aa		3.69	□□□□□ -1.82
TFB1	YDR311W	ESC2	Q06340	456 aa		3.69	□□□□□ -1.82
TFB1	YDR311W	YOR296W	Q08748	1289 aa		3.69	□□□□□ -1.82
TFB1	YDR311W	CAN1	P04817	590 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	HEM13	P11353	328 aa	Known RBP	3.68	□□□□□ -1.82
TFB1	YDR311W	RPL8B	P29453	256 aa	Known RBP	3.68	□□□□□ -1.82
TFB1	YDR311W	PYC2	P32327	1180 aa	Known RBP	3.68	□□□□□ -1.82
TFB1	YDR311W	RVS167	P39743	482 aa	Known RBP	3.68	□□□□□ -1.82
TFB1	YDR311W	UTP14	Q04500	899 aa	Known RBP	3.68	□□□□□ -1.82
TFB1	YDR311W	YOL057W	Q08225	711 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	AI1	P03875	834 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	RGP1	P16664	663 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	SRM1	P21827	482 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	FPS1	P23900	669 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	SEA4	P38164	1038 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	CRP1	P38845	465 aa	Known RBP	3.68	□□□□□ -1.82
TFB1	YDR311W	MSH6	Q03834	1242 aa		3.68	□□□□□ -1.82
TFB1	YDR311W	ABD1	P32783	436 aa	Predicted RBP	3.67	□□□□□ -1.82
TFB1	YDR311W	ECM2	P38241	364 aa	Known RBP	3.67	□□□□□ -1.82
TFB1	YDR311W	PFD1	P46988	109 aa		3.67	□□□□□ -1.82
TFB1	YDR311W	RSM26	P47141	266 aa		3.67	□□□□□ -1.82
TFB1	YDR311W	ZDS1	P50111	915 aa	Known RBP	3.67	□□□□□ -1.82
TFB1	YDR311W	YGL081W	P53156	320 aa		3.67	□□□□□ -1.82
TFB1	YDR311W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.67	□□□□□ -1.82	not detected
TFB1	YDR311W	HDA2	Q06629	674 aa		3.67	□□□□□ -1.82
TFB1	YDR311W	THI72	Q08579	599 aa		3.67	□□□□□ -1.82
TFB1	YDR311W	PHM7	Q12252	991 aa		3.67	□□□□□ -1.82
TFB1	YDR311W	NOP14	Q99207	810 aa	Known RBP	3.67	□□□□□ -1.82
TFB1	YDR311W	TRP2	P00899	507 aa	Known RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	GPM1	P00950	247 aa	Known RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	VBA5	P36172	582 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	MSC7	P38694	644 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	HXT13	P39924	564 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	YTA6	P40328	754 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	YIL165C	P40446	119 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	SAP155	P43612	1002 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.66	□□□□□ -1.82	not detected
TFB1	YDR311W	ITC1	P53125	1264 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	HXT17	P53631	564 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	YNR029C	P53729	429 aa	Known RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	HXT15	P54854	567 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	CUS1	Q02554	436 aa	Predicted RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	TY1A-DR2	Q03964	440 aa	Known RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	YLR225C	Q05948	407 aa	Known RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	SPO75	Q07798	868 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	TMA46	Q12000	345 aa	Known RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	OSH2	Q12451	1283 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	ADR1	P07248	1323 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	RPL8A	P17076	256 aa	Known RBP	3.66	□□□□□ -1.82
TFB1	YDR311W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.66	□□□□□ -1.82	not detected
TFB1	YDR311W	RER2	P35196	286 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	PEX28	P38848	579 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	YGL140C	P53120	1219 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	FOL1	P53848	824 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	PEX13	P80667	386 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	FMP25	Q08023	583 aa		3.66	□□□□□ -1.82
TFB1	YDR311W	CIT1	P00890	479 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	HSP60	P19882	572 aa	Known RBP	3.65	□□□□□ -1.83
TFB1	YDR311W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.65	□□□□□ -1.83	not detected
TFB1	YDR311W	AGP1	P25376	633 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	SQT1	P35184	431 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	YBR287W	P38355	427 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	TPM2	P40414	161 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	IRR1	P40541	1150 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	SBE2	P42223	864 aa	Known RBP	3.65	□□□□□ -1.83
TFB1	YDR311W	SKP1	P52286	194 aa		3.65	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms