RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	TY1B-H	O13535	1793 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-DR5	P0C2I2	1755 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-DR6	P0C2I3	1755 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-LR2	P0C2I5	1755 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-PR2	P0C2J0	1756 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-JR1	P47098	1755 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-ML2	Q03434	1755 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-ER1	Q03612	1755 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-ML1	Q04711	1755 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-GR2	Q12269	1755 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-OL	Q12273	1755 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TY1B-PL	Q12414	1755 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	RPO26	P20435	155 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	UBC1	P21734	215 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	HIR2	P32480	875 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	NPL6	P32832	435 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	YGL015C	P33199	130 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	CDC27	P38042	758 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	TBS1	P38114	1094 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	SPC72	P39723	622 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	YIL001W	P40560	513 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	YJR079W	P47126	109 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	ECL1	P48235	211 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
DBF4	YDR052C	MGR3	Q04472	501 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	YLR177W	Q06251	628 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	NOP12	Q08208	459 aa	Known RBP	5.71	□□□□□ -1.5
DBF4	YDR052C	GNT1	Q12096	491 aa		5.71	□□□□□ -1.5
DBF4	YDR052C	VAS1	P07806	1104 aa	Known RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	PET122	P10355	254 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	SEC15	P22224	910 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	SMY2	P32909	740 aa	Known RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	CIC1	P38779	376 aa	Known RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	MRX1	P40050	688 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	RTR1	P40084	226 aa	Predicted RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	ATG3	P40344	310 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	HUL4	P40985	892 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	CAF130	P53280	1122 aa	Predicted RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	ESF2	P53743	316 aa	Known RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	BNI5	P53890	448 aa	Known RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	NOP15	P53927	220 aa	Predicted RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	TFB2	Q02939	513 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	YML108W	Q03759	105 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	ITT1	Q04638	464 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	THI22	Q06490	572 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	BRE1	Q07457	700 aa	Known RBP	5.7	□□□□□ -1.5
DBF4	YDR052C	APL4	Q12028	832 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	SWI1	P09547	1314 aa		5.7	□□□□□ -1.5
DBF4	YDR052C	TYR1	P20049	452 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	HCA4	P20448	770 aa	Known RBP	5.69	□□□□□ -1.5
DBF4	YDR052C	AMN1	P38285	549 aa	Predicted RBP	5.69	□□□□□ -1.5
DBF4	YDR052C	SIP3	P38717	1229 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	SAK1	P38990	1142 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	MET10	P39692	1035 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	VID27	P40157	782 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	MET18	P40469	1032 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	FMS1	P50264	508 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	ESBP6	P53918	673 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	HEF3	P53978	1044 aa	Known RBP	5.69	□□□□□ -1.5
DBF4	YDR052C	YOL098C	Q12496	1037 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	DUR1,2	P32528	1835 aa	Known RBP	5.69	□□□□□ -1.5
DBF4	YDR052C	TRP5	P00931	707 aa	Known RBP	5.69	□□□□□ -1.5
DBF4	YDR052C	CDC31	P06704	161 aa	Known RBP	5.69	□□□□□ -1.5
DBF4	YDR052C	ASF1	P32447	279 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	NUP120	P35729	1037 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	LIN1	P38852	340 aa	Predicted RBP	5.69	□□□□□ -1.5
DBF4	YDR052C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
DBF4	YDR052C	MAM1	P40065	302 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	FYV10	P40492	516 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	RSC2	Q06488	889 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	YDL073W	Q07454	984 aa		5.69	□□□□□ -1.5
DBF4	YDR052C	JIP3	O13555	125 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	HIS3	P06633	220 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	PET494	P07390	489 aa	Predicted RBP	5.68	□□□□□ -1.5
DBF4	YDR052C	STE6	P12866	1290 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	DPB3	P27344	201 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	RAD5	P32849	1169 aa	Predicted RBP	5.68	□□□□□ -1.5
DBF4	YDR052C	HSM3	P38348	480 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	SDS3	P40505	327 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	TRS85	P46944	698 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	APT1	P49435	187 aa	Known RBP	5.68	□□□□□ -1.5
DBF4	YDR052C	TAF8	Q03750	510 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	FUS2	Q05670	677 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	SSQ1	Q05931	657 aa	Predicted RBP	5.68	□□□□□ -1.5
DBF4	YDR052C	ATG23	Q06671	453 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	HMG1	P12683	1054 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	LOS1	P33418	1100 aa	Predicted RBP	5.68	□□□□□ -1.5
DBF4	YDR052C	COY1	P34237	679 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	KES1	P35844	434 aa	Known RBP	5.68	□□□□□ -1.5
DBF4	YDR052C	INA22	P40576	216 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	DAS1	P47005	663 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	STR2	P47164	639 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	RPA14	P50106	137 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	ARI1	P53111	347 aa	Known RBP	5.68	□□□□□ -1.5
DBF4	YDR052C	MEH1	Q02205	184 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	ARR2	Q06597	130 aa		5.68	□□□□□ -1.5
DBF4	YDR052C	TMA16	Q08687	178 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms