RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C SPC72P39723 622 aa7.74□□□□□ -1.17
CDC13YDL220C RIA1P53893 1110 aa7.74□□□□□ -1.17
CDC13YDL220C CMP2P14747 604 aa7.73□□□□□ -1.17
CDC13YDL220C CCT4P39078 528 aaKnown RBP7.73□□□□□ -1.17
CDC13YDL220C RLP7P40693 322 aaKnown RBP7.73□□□□□ -1.17
CDC13YDL220C ECL1P48235 211 aa7.73□□□□□ -1.17
CDC13YDL220C OCA1P50946 238 aaPredicted RBP7.73□□□□□ -1.17
CDC13YDL220C MSN5P52918 1224 aa7.73□□□□□ -1.17
CDC13YDL220C TFB2Q02939 513 aa7.73□□□□□ -1.17
CDC13YDL220C SSQ1Q05931 657 aaPredicted RBP7.73□□□□□ -1.17
CDC13YDL220C STE23Q06010 1027 aa7.73□□□□□ -1.17
CDC13YDL220C APL4Q12028 832 aa7.73□□□□□ -1.17
CDC13YDL220C VTH1P40438 1549 aa7.73□□□□□ -1.17
CDC13YDL220C VTH2P40890 1549 aa7.73□□□□□ -1.17
CDC13YDL220C KES1P35844 434 aaKnown RBP7.73□□□□□ -1.17
CDC13YDL220C TBS1P38114 1094 aa7.73□□□□□ -1.17
CDC13YDL220C MET18P40469 1032 aa7.73□□□□□ -1.17
CDC13YDL220C CKB1P43639 278 aa7.73□□□□□ -1.17
CDC13YDL220C SHE10P53075 577 aa7.73□□□□□ -1.17
CDC13YDL220C ABP140Q08641 628 aaKnown RBP7.73□□□□□ -1.17
CDC13YDL220C HIS3P06633 220 aa7.72□□□□□ -1.17
CDC13YDL220C HIR2P32480 875 aa7.72□□□□□ -1.17
CDC13YDL220C NUP120P35729 1037 aa7.72□□□□□ -1.17
CDC13YDL220C FYV10P40492 516 aa7.72□□□□□ -1.17
CDC13YDL220C INA22P40576 216 aa7.72□□□□□ -1.17
CDC13YDL220C GCN20P43535 752 aaKnown RBP7.72□□□□□ -1.17
CDC13YDL220C YJR079WP47126 109 aa7.72□□□□□ -1.17
CDC13YDL220C MON1P53129 644 aa7.72□□□□□ -1.17
CDC13YDL220C ATG13Q06628 738 aa7.72□□□□□ -1.17
CDC13YDL220C STE6P12866 1290 aa7.72□□□□□ -1.17
CDC13YDL220C UBC1P21734 215 aaKnown RBP7.72□□□□□ -1.17
CDC13YDL220C LOS1P33418 1100 aaPredicted RBP7.72□□□□□ -1.17
CDC13YDL220C CDC27P38042 758 aa7.72□□□□□ -1.17
CDC13YDL220C HXT5P38695 592 aa7.72□□□□□ -1.17
CDC13YDL220C TDA11P38854 504 aa7.72□□□□□ -1.17
CDC13YDL220C VTC2P43585 828 aa7.72□□□□□ -1.17
CDC13YDL220C YML108WQ03759 105 aa7.72□□□□□ -1.17
CDC13YDL220C SYF1Q04048 859 aaPredicted RBP7.72□□□□□ -1.17
CDC13YDL220C CDC10P25342 322 aaKnown RBP7.71□□□□□ -1.17
CDC13YDL220C APD1P38281 316 aa7.71□□□□□ -1.17
CDC13YDL220C SAK1P38990 1142 aa7.71□□□□□ -1.17
CDC13YDL220C RTR1P40084 226 aaPredicted RBP7.71□□□□□ -1.17
CDC13YDL220C YIL001WP40560 513 aa7.71□□□□□ -1.17
CDC13YDL220C RPA14P50106 137 aa7.71□□□□□ -1.17
CDC13YDL220C RRP46P53256 223 aaPredicted RBP7.71□□□□□ -1.17
CDC13YDL220C MUB1Q03162 620 aa7.71□□□□□ -1.17
CDC13YDL220C ITT1Q04638 464 aa7.71□□□□□ -1.17
CDC13YDL220C BDF2Q07442 638 aa7.71□□□□□ -1.17
CDC13YDL220C BUD21Q08492 214 aaPredicted RBP7.71□□□□□ -1.17
CDC13YDL220C CDC31P06704 161 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TYR1P20049 452 aa7.71□□□□□ -1.18
CDC13YDL220C STE11P23561 717 aa7.71□□□□□ -1.18
CDC13YDL220C YSW1P38280 609 aa7.71□□□□□ -1.18
CDC13YDL220C NMD3P38861 518 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C SSP1P38871 571 aa7.71□□□□□ -1.18
CDC13YDL220C MRX1P40050 688 aa7.71□□□□□ -1.18
CDC13YDL220C JJJ2P46997 583 aa7.71□□□□□ -1.18
CDC13YDL220C APT1P49435 187 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C UTP22P53254 1237 aaPredicted RBP7.71□□□□□ -1.18
CDC13YDL220C MEH1Q02205 184 aa7.71□□□□□ -1.18
CDC13YDL220C FUS2Q05670 677 aa7.71□□□□□ -1.18
CDC13YDL220C YLR177WQ06251 628 aa7.71□□□□□ -1.18
CDC13YDL220C YPQ2Q06328 317 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-HO13535 1793 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-DR5P0C2I2 1755 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-DR6P0C2I3 1755 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-LR2P0C2I5 1755 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-LR3P0C2I6 1755 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TY1B-PR1P0C2I9 1755 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TY1B-PR2P0C2J0 1756 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-PR3P0C2J1 1755 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TY1B-JR1P47098 1755 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-ML2Q03434 1755 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TY1B-ER1Q03612 1755 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-ML1Q04711 1755 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TY1B-GR2Q12269 1755 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-OLQ12273 1755 aa7.71□□□□□ -1.18
CDC13YDL220C TY1B-PLQ12414 1755 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C RAD1P06777 1100 aa7.71□□□□□ -1.18
CDC13YDL220C RNR2P09938 399 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C NAT1P12945 854 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C ETP1P38748 585 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C RPT2P40327 437 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TRS85P46944 698 aa7.71□□□□□ -1.18
CDC13YDL220C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
CDC13YDL220C SMD2Q06217 110 aaKnown RBP7.71□□□□□ -1.18
CDC13YDL220C TMA16Q08687 178 aa7.71□□□□□ -1.18
CDC13YDL220C CDC25P04821 1589 aa7.7□□□□□ -1.18
CDC13YDL220C SWI1P09547 1314 aa7.7□□□□□ -1.18
CDC13YDL220C PET494P07390 489 aaPredicted RBP7.7□□□□□ -1.18
CDC13YDL220C RPO26P20435 155 aa7.7□□□□□ -1.18
CDC13YDL220C ARC19P33204 171 aaKnown RBP7.7□□□□□ -1.18
CDC13YDL220C HUL4P40985 892 aa7.7□□□□□ -1.18
CDC13YDL220C YGR266WP53326 701 aa7.7□□□□□ -1.18
CDC13YDL220C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
CDC13YDL220C RKM4Q12504 494 aa7.7□□□□□ -1.18
CDC13YDL220C DRS2P39524 1355 aa7.7□□□□□ -1.18
CDC13YDL220C TRP5P00931 707 aaKnown RBP7.7□□□□□ -1.18
CDC13YDL220C PET122P10355 254 aa7.7□□□□□ -1.18
CDC13YDL220C COY1P34237 679 aa7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms