RNA–Protein interactions for RNA: YDL110C

TMA17, Transcript of ATPase dedicated chaperone that adapts proteasome assembly to stress, yeast

Gene TMA17, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA17	YDL110C	ALD6	P54115	500 aa	Known RBP	4.9	□□□□□ -1.63
TMA17	YDL110C	TAH18	Q12181	623 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	BRE1	Q07457	700 aa	Known RBP	4.89	□□□□□ -1.63
TMA17	YDL110C	ECM29	P38737	1868 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	SAM1	P10659	382 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	RAD18	P10862	487 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	KTR1	P27810	393 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	TGL1	P34163	548 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	SHP1	P34223	423 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	WHI3	P34761	661 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	MYO3	P36006	1272 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	KSP1	P38691	1029 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	FPR3	P38911	411 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	PTK2	P47116	818 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	YJR107W	P47145	328 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	SCS3	P53012	380 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	YGR125W	P53273	1036 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	SOL4	P53315	255 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	UFD2	P54860	961 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	YPL034W	Q03083	165 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	TMA64	Q04600	565 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	MRD1	Q06106	887 aa	Known RBP	4.88	□□□□□ -1.63
TMA17	YDL110C	MAM3	Q12296	706 aa		4.88	□□□□□ -1.63
TMA17	YDL110C	TAO3	P40468	2376 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	YPR117W	Q06116	2489 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	ACE2	P21192	770 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	OPI1	P21957	404 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	DBP1	P24784	617 aa	Known RBP	4.87	□□□□□ -1.63
TMA17	YDL110C	YUR1	P26725	428 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	KTR2	P33550	425 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	MET1	P36150	593 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	RRP8	P38961	392 aa	Known RBP	4.87	□□□□□ -1.63
TMA17	YDL110C	VPS8	P39702	1274 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	SLN1	P39928	1220 aa	Predicted RBP	4.87	□□□□□ -1.63
TMA17	YDL110C	UBP9	P39967	754 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	HDA1	P53973	706 aa		4.87	□□□□□ -1.63
TMA17	YDL110C	RPS15	Q01855	142 aa	Known RBP	4.87	□□□□□ -1.63
TMA17	YDL110C	BUL2	Q03758	920 aa	Known RBP	4.87	□□□□□ -1.63
TMA17	YDL110C	CDC19	P00549	500 aa	Known RBP	4.86	□□□□□ -1.63
TMA17	YDL110C	RIT1	P23796	513 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	SRP40	P32583	406 aa	Predicted RBP	4.86	□□□□□ -1.63
TMA17	YDL110C	YKR018C	P36114	725 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	VPS29	P38759	282 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	STM1	P39015	273 aa	Known RBP	4.86	□□□□□ -1.63
TMA17	YDL110C	YFL040W	P43562	540 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	YGL039W	P53183	348 aa	Known RBP	4.86	□□□□□ -1.63
TMA17	YDL110C	YAF9	P53930	226 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	FMP30	Q02883	468 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	YMR321C	Q04898	105 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	DUS3	Q06053	668 aa	Known RBP	4.86	□□□□□ -1.63
TMA17	YDL110C	SPH1	Q06160	661 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	NKP2	Q06162	153 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	SUE1	Q06524	206 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	CSC1	Q06538	782 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	YDR461C-A	Q2V2P7	80 aa		4.86	□□□□□ -1.63
TMA17	YDL110C	PDC1	P06169	563 aa	Known RBP	4.85	□□□□□ -1.63
TMA17	YDL110C	SRP54	P20424	541 aa	Known RBP	4.85	□□□□□ -1.63
TMA17	YDL110C	ANP1	P32629	500 aa		4.85	□□□□□ -1.63
TMA17	YDL110C	DBP7	P36120	742 aa	Known RBP	4.85	□□□□□ -1.63
TMA17	YDL110C	RFC1	P38630	861 aa	Known RBP	4.85	□□□□□ -1.63
TMA17	YDL110C	NDT80	P38830	627 aa		4.85	□□□□□ -1.63
TMA17	YDL110C	NOC2	P39744	710 aa	Known RBP	4.85	□□□□□ -1.63
TMA17	YDL110C	CTR1	P49573	406 aa		4.85	□□□□□ -1.63
TMA17	YDL110C	VPS30	Q02948	557 aa		4.85	□□□□□ -1.63
TMA17	YDL110C	EAR1	Q03212	550 aa		4.85	□□□□□ -1.63
TMA17	YDL110C	ERP3	Q12403	225 aa		4.85	□□□□□ -1.63
TMA17	YDL110C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
TMA17	YDL110C	HIP1	P06775	603 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	MIP1	P15801	1254 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
TMA17	YDL110C	TOM71	P38825	639 aa	Known RBP	4.84	□□□□□ -1.63
TMA17	YDL110C	PES4	P39684	611 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	CSM2	P40465	213 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	SKP2	P42843	763 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	FOL1	P53848	824 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	SLD5	Q03406	294 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	UTP4	Q06679	776 aa	Known RBP	4.84	□□□□□ -1.63
TMA17	YDL110C	RIM20	Q12033	661 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	AHC1	Q12433	566 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	YDR034W-B	Q6Q5X2	51 aa		4.84	□□□□□ -1.63
TMA17	YDL110C	NUC1	P08466	329 aa		4.83	□□□□□ -1.64
TMA17	YDL110C	POX1	P13711	748 aa		4.83	□□□□□ -1.64
TMA17	YDL110C	MCR1	P36060	302 aa	Known RBP	4.83	□□□□□ -1.64
TMA17	YDL110C	AAP1	P37898	856 aa	Known RBP	4.83	□□□□□ -1.64
TMA17	YDL110C	MYO5	Q04439	1219 aa	Known RBP	4.83	□□□□□ -1.64
TMA17	YDL110C	GUD1	Q07729	489 aa		4.83	□□□□□ -1.64
TMA17	YDL110C	MSC6	Q08818	692 aa	Known RBP	4.83	□□□□□ -1.64
TMA17	YDL110C	SSF2	Q12153	453 aa	Predicted RBP	4.83	□□□□□ -1.64
TMA17	YDL110C	LDB19	Q12502	818 aa		4.83	□□□□□ -1.64
TMA17	YDL110C	RAD50	P12753	1312 aa		4.82	□□□□□ -1.64
TMA17	YDL110C	TKL1	P23254	680 aa	Known RBP	4.82	□□□□□ -1.64
TMA17	YDL110C	GRS1	P38088	690 aa	Known RBP	4.82	□□□□□ -1.64
TMA17	YDL110C	FLR1	P38124	548 aa		4.82	□□□□□ -1.64
TMA17	YDL110C	CRG1	P38892	291 aa	RIP-Chip data	4.82	□□□□□ -1.64	not detected
TMA17	YDL110C	VPS45	P38932	577 aa		4.82	□□□□□ -1.64
TMA17	YDL110C	DAK1	P54838	584 aa	Known RBP	4.82	□□□□□ -1.64
TMA17	YDL110C	RPT6	Q01939	405 aa	Known RBP	4.82	□□□□□ -1.64
TMA17	YDL110C	TFC6	Q06339	672 aa		4.82	□□□□□ -1.64
TMA17	YDL110C	TRM11	Q12463	433 aa		4.82	□□□□□ -1.64
TMA17	YDL110C	YDR524C-B	Q3E6R4	66 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms