RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W SOG2Q08817 791 aa6.03□□□□□ -1.44
KIN28YDL108W NEO1P40527 1151 aa6.02□□□□□ -1.45
KIN28YDL108W YPL109CQ02981 657 aa6.02□□□□□ -1.45
KIN28YDL108W PRE9P23638 258 aaKnown RBP6.01□□□□□ -1.45
KIN28YDL108W ALG14P38242 237 aa6.01□□□□□ -1.45
KIN28YDL108W LSB6P42951 607 aa6.01□□□□□ -1.45
KIN28YDL108W YMR187CQ03236 431 aa6.01□□□□□ -1.45
KIN28YDL108W ADI1Q03677 179 aa6.01□□□□□ -1.45
KIN28YDL108W PET112P33893 541 aa6□□□□□ -1.45
KIN28YDL108W AMN1P38285 549 aaPredicted RBP6□□□□□ -1.45
KIN28YDL108W SHU2P38957 223 aa6□□□□□ -1.45
KIN28YDL108W MAD1P40957 749 aa6□□□□□ -1.45
KIN28YDL108W GUP1P53154 560 aa6□□□□□ -1.45
KIN28YDL108W SOK2P53438 785 aaPredicted RBP6□□□□□ -1.45
KIN28YDL108W YNR065CP53751 1116 aa6□□□□□ -1.45
KIN28YDL108W HVG1P0CE11 249 aa5.99□□□□□ -1.45
KIN28YDL108W PGM2P37012 569 aaKnown RBP5.99□□□□□ -1.45
KIN28YDL108W LEM3P42838 414 aa5.99□□□□□ -1.45
KIN28YDL108W GIS4Q04233 774 aa5.99□□□□□ -1.45
KIN28YDL108W SLP1Q12232 587 aa5.99□□□□□ -1.45
KIN28YDL108W CLN2P20438 545 aa5.98□□□□□ -1.45
KIN28YDL108W PRP5P21372 849 aaPredicted RBP5.98□□□□□ -1.45
KIN28YDL108W NAR1P23503 491 aaKnown RBP5.98□□□□□ -1.45
KIN28YDL108W YJR008WP47085 338 aa5.98□□□□□ -1.45
KIN28YDL108W PEX13P80667 386 aa5.98□□□□□ -1.45
KIN28YDL108W GIP2P40036 548 aa5.97□□□□□ -1.45
KIN28YDL108W TED1P40533 473 aa5.97□□□□□ -1.45
KIN28YDL108W HAS1Q03532 505 aaKnown RBP5.97□□□□□ -1.45
KIN28YDL108W NHA1Q99271 985 aa5.97□□□□□ -1.45
KIN28YDL108W HTS1P07263 546 aaKnown RBP5.96□□□□□ -1.46
KIN28YDL108W YCK2P23292 546 aaKnown RBP5.96□□□□□ -1.46
KIN28YDL108W MNR2P35724 969 aa5.96□□□□□ -1.46
KIN28YDL108W YKL077WP36081 392 aa5.96□□□□□ -1.46
KIN28YDL108W PEX28P38848 579 aa5.96□□□□□ -1.46
KIN28YDL108W ATG36P46983 293 aa5.96□□□□□ -1.46
KIN28YDL108W SPO71Q03868 1245 aa5.96□□□□□ -1.46
KIN28YDL108W SAC7P17121 654 aa5.95□□□□□ -1.46
KIN28YDL108W MSH3P25336 1018 aa5.95□□□□□ -1.46
KIN28YDL108W PAN5P38787 379 aa5.95□□□□□ -1.46
KIN28YDL108W PIC2P40035 300 aa5.95□□□□□ -1.46
KIN28YDL108W YNR014WP53719 212 aa5.95□□□□□ -1.46
KIN28YDL108W NOG1Q02892 647 aaKnown RBP5.95□□□□□ -1.46
KIN28YDL108W EBP2P36049 427 aaKnown RBP5.94□□□□□ -1.46
KIN28YDL108W XKS1P42826 600 aa5.94□□□□□ -1.46
KIN28YDL108W VPS16Q03308 798 aa5.94□□□□□ -1.46
KIN28YDL108W YIG1Q08956 461 aa5.94□□□□□ -1.46
KIN28YDL108W PIN2Q12057 282 aa5.94□□□□□ -1.46
KIN28YDL108W MCX1P38323 520 aaPredicted RBP5.93□□□□□ -1.46
KIN28YDL108W BOI2P39969 1040 aa5.93□□□□□ -1.46
KIN28YDL108W OSW7P43611 510 aa5.93□□□□□ -1.46
KIN28YDL108W UTP22P53254 1237 aaPredicted RBP5.93□□□□□ -1.46
KIN28YDL108W CWC24P53769 259 aa5.93□□□□□ -1.46
KIN28YDL108W MRL1Q06815 381 aa5.93□□□□□ -1.46
KIN28YDL108W TY1A-LR4P0C2I8 440 aaKnown RBP5.92□□□□□ -1.46
KIN28YDL108W TY1A-DR6P0CX70 440 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-ER1P0CX71 440 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-LR2P0CX72 440 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-PLP0CX73 440 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-JR1P0CX74 440 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-LR3P0CX75 440 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-ML2P0CX76 440 aa5.92□□□□□ -1.46
KIN28YDL108W EXO5P38289 585 aa5.92□□□□□ -1.46
KIN28YDL108W YGL140CP53120 1219 aa5.92□□□□□ -1.46
KIN28YDL108W FAR11P53917 953 aa5.92□□□□□ -1.46
KIN28YDL108W YMR074CQ04773 145 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-GR1Q12085 440 aa5.92□□□□□ -1.46
KIN28YDL108W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.92□□□□□ -1.46
KIN28YDL108W TY1A-OLQ92392 440 aaKnown RBP5.92□□□□□ -1.46
KIN28YDL108W YTA7P40340 1379 aa5.92□□□□□ -1.46
KIN28YDL108W SEC23P15303 768 aaKnown RBP5.91□□□□□ -1.46
KIN28YDL108W SPC42P36094 363 aa5.91□□□□□ -1.46
KIN28YDL108W ATG14P38270 344 aa5.91□□□□□ -1.46
KIN28YDL108W VAC8P39968 578 aa5.91□□□□□ -1.46
KIN28YDL108W MTR4P47047 1073 aaKnown RBP5.91□□□□□ -1.46
KIN28YDL108W GCV1P48015 400 aa5.91□□□□□ -1.46
KIN28YDL108W ALD6P54115 500 aaKnown RBP5.91□□□□□ -1.46
KIN28YDL108W MAG2Q06436 670 aaKnown RBP5.91□□□□□ -1.46
KIN28YDL108W BUD21Q08492 214 aaPredicted RBP5.91□□□□□ -1.46
KIN28YDL108W ELG1Q12050 791 aa5.91□□□□□ -1.46
KIN28YDL108W GCR1P07261 785 aa5.9□□□□□ -1.46
KIN28YDL108W TAF13P11747 167 aa5.9□□□□□ -1.46
KIN28YDL108W CDC34P14682 295 aa5.9□□□□□ -1.46
KIN28YDL108W VMA4P22203 233 aaKnown RBP5.9□□□□□ -1.46
KIN28YDL108W SLN1P39928 1220 aaPredicted RBP5.9□□□□□ -1.46
KIN28YDL108W POL5P39985 1022 aaKnown RBP5.9□□□□□ -1.46
KIN28YDL108W TPO2P53283 614 aa5.9□□□□□ -1.46
KIN28YDL108W RTT10Q08924 1013 aa5.9□□□□□ -1.46
KIN28YDL108W YDR215CQ12240 137 aa5.9□□□□□ -1.46
KIN28YDL108W YLL054CQ12244 843 aa5.9□□□□□ -1.46
KIN28YDL108W TY4B-PA0A0B7P3V8 1104 aa5.89□□□□□ -1.47
KIN28YDL108W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
KIN28YDL108W RAD27P26793 382 aa5.89□□□□□ -1.47
KIN28YDL108W MAE1P36013 669 aaKnown RBP5.89□□□□□ -1.47
KIN28YDL108W RRM3P38766 723 aa5.89□□□□□ -1.47
KIN28YDL108W NAB3P38996 802 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
KIN28YDL108W DSE4P53753 1117 aa5.89□□□□□ -1.47
KIN28YDL108W MCA1Q08601 432 aa5.89□□□□□ -1.47
KIN28YDL108W HIF1Q12373 385 aa5.89□□□□□ -1.47
KIN28YDL108W TY4A-HQ6Q5P6 413 aa5.89□□□□□ -1.47
KIN28YDL108W GLT1Q12680 2145 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms