RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W PIN2Q12057 282 aa6.58□□□□□ -1.36
PTC1YDL006W UGA4P32837 571 aa6.57□□□□□ -1.36
PTC1YDL006W PET112P33893 541 aa6.57□□□□□ -1.36
PTC1YDL006W SQT1P35184 431 aa6.57□□□□□ -1.36
PTC1YDL006W RSM26P47141 266 aa6.56□□□□□ -1.36
PTC1YDL006W YNR065CP53751 1116 aa6.56□□□□□ -1.36
PTC1YDL006W VPS16Q03308 798 aa6.56□□□□□ -1.36
PTC1YDL006W GIS4Q04233 774 aa6.56□□□□□ -1.36
PTC1YDL006W PIC2P40035 300 aa6.55□□□□□ -1.36
PTC1YDL006W MAD1P40957 749 aa6.55□□□□□ -1.36
PTC1YDL006W LSB6P42951 607 aa6.55□□□□□ -1.36
PTC1YDL006W YGR035CP53222 116 aa6.55□□□□□ -1.36
PTC1YDL006W HPF1Q05164 967 aa6.55□□□□□ -1.36
PTC1YDL006W SEC23P15303 768 aaKnown RBP6.54□□□□□ -1.36
PTC1YDL006W HAS1Q03532 505 aaKnown RBP6.54□□□□□ -1.36
PTC1YDL006W YIG1Q08956 461 aa6.54□□□□□ -1.36
PTC1YDL006W UFD4P33202 1483 aa6.53□□□□□ -1.36
PTC1YDL006W SCC2Q04002 1493 aa6.53□□□□□ -1.36
PTC1YDL006W BPT1P14772 1559 aa6.53□□□□□ -1.36
PTC1YDL006W HTS1P07263 546 aaKnown RBP6.53□□□□□ -1.36
PTC1YDL006W NAR1P23503 491 aaKnown RBP6.53□□□□□ -1.36
PTC1YDL006W PEX28P38848 579 aa6.53□□□□□ -1.36
PTC1YDL006W ENT3P47160 408 aa6.53□□□□□ -1.36
PTC1YDL006W MAG2Q06436 670 aaKnown RBP6.53□□□□□ -1.36
PTC1YDL006W ARL1P38116 183 aaKnown RBP6.52□□□□□ -1.37
PTC1YDL006W NEO1P40527 1151 aa6.52□□□□□ -1.37
PTC1YDL006W SPO71Q03868 1245 aa6.52□□□□□ -1.37
PTC1YDL006W CDC34P14682 295 aa6.51□□□□□ -1.37
PTC1YDL006W MSH3P25336 1018 aa6.51□□□□□ -1.37
PTC1YDL006W YKL077WP36081 392 aa6.51□□□□□ -1.37
PTC1YDL006W ALG14P38242 237 aa6.51□□□□□ -1.37
PTC1YDL006W EXO5P38289 585 aa6.51□□□□□ -1.37
PTC1YDL006W GIP2P40036 548 aa6.51□□□□□ -1.37
PTC1YDL006W YGL140CP53120 1219 aa6.51□□□□□ -1.37
PTC1YDL006W UTP22P53254 1237 aaPredicted RBP6.51□□□□□ -1.37
PTC1YDL006W SOK2P53438 785 aaPredicted RBP6.51□□□□□ -1.37
PTC1YDL006W NHA1Q99271 985 aa6.51□□□□□ -1.37
PTC1YDL006W RPO31P04051 1460 aa6.51□□□□□ -1.37
PTC1YDL006W VMA4P22203 233 aaKnown RBP6.5□□□□□ -1.37
PTC1YDL006W PGM2P37012 569 aaKnown RBP6.5□□□□□ -1.37
PTC1YDL006W GCV1P48015 400 aa6.5□□□□□ -1.37
PTC1YDL006W PEX13P80667 386 aa6.5□□□□□ -1.37
PTC1YDL006W RTT10Q08924 1013 aa6.5□□□□□ -1.37
PTC1YDL006W POL1P13382 1468 aa6.49□□□□□ -1.37
PTC1YDL006W RDH54P38086 958 aa6.49□□□□□ -1.37
PTC1YDL006W PAN5P38787 379 aa6.49□□□□□ -1.37
PTC1YDL006W XKS1P42826 600 aa6.49□□□□□ -1.37
PTC1YDL006W TMA46Q12000 345 aaKnown RBP6.49□□□□□ -1.37
PTC1YDL006W SAC7P17121 654 aa6.48□□□□□ -1.37
PTC1YDL006W GNP1P48813 663 aa6.48□□□□□ -1.37
PTC1YDL006W ALD6P54115 500 aaKnown RBP6.48□□□□□ -1.37
PTC1YDL006W STU1P38198 1513 aa6.47□□□□□ -1.37
PTC1YDL006W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
PTC1YDL006W GCR1P07261 785 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-LR4P0C2I8 440 aaKnown RBP6.47□□□□□ -1.37
PTC1YDL006W TY1A-DR6P0CX70 440 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-ER1P0CX71 440 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-LR2P0CX72 440 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-PLP0CX73 440 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-JR1P0CX74 440 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-LR3P0CX75 440 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-ML2P0CX76 440 aa6.47□□□□□ -1.37
PTC1YDL006W DUT1P33317 147 aa6.47□□□□□ -1.37
PTC1YDL006W POL5P39985 1022 aaKnown RBP6.47□□□□□ -1.37
PTC1YDL006W TED1P40533 473 aa6.47□□□□□ -1.37
PTC1YDL006W MTR4P47047 1073 aaKnown RBP6.47□□□□□ -1.37
PTC1YDL006W NNF1P47149 201 aa6.47□□□□□ -1.37
PTC1YDL006W SIW14P53965 281 aa6.47□□□□□ -1.37
PTC1YDL006W ORC1P54784 914 aaPredicted RBP6.47□□□□□ -1.37
PTC1YDL006W MEC3Q02574 474 aa6.47□□□□□ -1.37
PTC1YDL006W MRL1Q06815 381 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-GR1Q12085 440 aa6.47□□□□□ -1.37
PTC1YDL006W YLL054CQ12244 843 aa6.47□□□□□ -1.37
PTC1YDL006W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.47□□□□□ -1.37
PTC1YDL006W TY1A-OLQ92392 440 aaKnown RBP6.47□□□□□ -1.37
PTC1YDL006W TY4B-PA0A0B7P3V8 1104 aa6.46□□□□□ -1.38
PTC1YDL006W AI1P03875 834 aa6.46□□□□□ -1.38
PTC1YDL006W TOP2P06786 1428 aaKnown RBP6.46□□□□□ -1.38
PTC1YDL006W RAD27P26793 382 aa6.46□□□□□ -1.38
PTC1YDL006W VAC8P39968 578 aa6.46□□□□□ -1.38
PTC1YDL006W DSE4P53753 1117 aa6.46□□□□□ -1.38
PTC1YDL006W FAR11P53917 953 aa6.46□□□□□ -1.38
PTC1YDL006W RKR1Q04781 1562 aa6.46□□□□□ -1.38
PTC1YDL006W HDA2Q06629 674 aa6.46□□□□□ -1.38
PTC1YDL006W ELG1Q12050 791 aa6.46□□□□□ -1.38
PTC1YDL006W TY4A-HQ6Q5P6 413 aa6.46□□□□□ -1.38
PTC1YDL006W OCA5P38738 679 aa6.45□□□□□ -1.38
PTC1YDL006W NEM1P38757 446 aa6.45□□□□□ -1.38
PTC1YDL006W YGR053CP53234 283 aa6.45□□□□□ -1.38
PTC1YDL006W CWC24P53769 259 aa6.45□□□□□ -1.38
PTC1YDL006W RKM2Q03942 479 aa6.45□□□□□ -1.38
PTC1YDL006W HEM13P11353 328 aaKnown RBP6.44□□□□□ -1.38
PTC1YDL006W TRK2P28584 889 aa6.44□□□□□ -1.38
PTC1YDL006W YJL049WP47048 450 aa6.44□□□□□ -1.38
PTC1YDL006W YCF1P39109 1515 aaKnown RBP6.44□□□□□ -1.38
PTC1YDL006W MAE1P36013 669 aaKnown RBP6.43□□□□□ -1.38
PTC1YDL006W KRI1P42846 591 aaKnown RBP6.43□□□□□ -1.38
PTC1YDL006W YPL062WQ02781 134 aa6.43□□□□□ -1.38
PTC1YDL006W GDE1Q02979 1223 aa6.43□□□□□ -1.38
PTC1YDL006W UTP5Q04177 643 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms