RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W SAC7P17121 654 aa5.38□□□□□ -1.55
YCL020WYCL020W PRP5P21372 849 aaPredicted RBP5.38□□□□□ -1.55
YCL020WYCL020W TAT1P38085 619 aa5.38□□□□□ -1.55
YCL020WYCL020W SKN7P38889 622 aa5.38□□□□□ -1.55
YCL020WYCL020W KIP3P53086 805 aaKnown RBP5.38□□□□□ -1.55
YCL020WYCL020W ULP1Q02724 621 aa5.38□□□□□ -1.55
YCL020WYCL020W SPO71Q03868 1245 aa5.38□□□□□ -1.55
YCL020WYCL020W PMT7Q06644 662 aa5.38□□□□□ -1.55
YCL020WYCL020W OXR1Q08952 273 aa5.38□□□□□ -1.55
YCL020WYCL020W ALG6Q12001 544 aaKnown RBP5.38□□□□□ -1.55
YCL020WYCL020W HXK1P04806 485 aaKnown RBP5.37□□□□□ -1.55
YCL020WYCL020W RVS167P39743 482 aaKnown RBP5.37□□□□□ -1.55
YCL020WYCL020W PEX13P80667 386 aa5.37□□□□□ -1.55
YCL020WYCL020W OYE2Q03558 400 aaKnown RBP5.37□□□□□ -1.55
YCL020WYCL020W YMR074CQ04773 145 aa5.37□□□□□ -1.55
YCL020WYCL020W AI3P03877 415 aa5.36□□□□□ -1.55
YCL020WYCL020W MGE1P38523 228 aa5.36□□□□□ -1.55
YCL020WYCL020W NAM7P30771 971 aaKnown RBP5.35□□□□□ -1.55
YCL020WYCL020W MAE1P36013 669 aaKnown RBP5.35□□□□□ -1.55
YCL020WYCL020W SLS1P42900 643 aa5.35□□□□□ -1.55
YCL020WYCL020W CCT8P47079 568 aaKnown RBP5.35□□□□□ -1.55
YCL020WYCL020W RSM26P47141 266 aa5.35□□□□□ -1.55
YCL020WYCL020W YJR107WP47145 328 aa5.35□□□□□ -1.55
YCL020WYCL020W UTP22P53254 1237 aaPredicted RBP5.35□□□□□ -1.55
YCL020WYCL020W EXO5P38289 585 aa5.34□□□□□ -1.55
YCL020WYCL020W PIC2P40035 300 aa5.34□□□□□ -1.55
YCL020WYCL020W DSE4P53753 1117 aa5.34□□□□□ -1.55
YCL020WYCL020W HEM13P11353 328 aaKnown RBP5.33□□□□□ -1.56
YCL020WYCL020W MSH3P25336 1018 aa5.33□□□□□ -1.56
YCL020WYCL020W AKR1P39010 764 aa5.33□□□□□ -1.56
YCL020WYCL020W LEM3P42838 414 aa5.33□□□□□ -1.56
YCL020WYCL020W YPL109CQ02981 657 aa5.33□□□□□ -1.56
YCL020WYCL020W YIG1Q08956 461 aa5.33□□□□□ -1.56
YCL020WYCL020W CYC8P14922 966 aa5.32□□□□□ -1.56
YCL020WYCL020W PEP7P32609 515 aa5.32□□□□□ -1.56
YCL020WYCL020W SFA1P32771 386 aa5.32□□□□□ -1.56
YCL020WYCL020W SQT1P35184 431 aa5.32□□□□□ -1.56
YCL020WYCL020W NEM1P38757 446 aa5.32□□□□□ -1.56
YCL020WYCL020W PEX28P38848 579 aa5.32□□□□□ -1.56
YCL020WYCL020W YGR122WP53272 402 aa5.32□□□□□ -1.56
YCL020WYCL020W NCE103P53615 221 aa5.32□□□□□ -1.56
YCL020WYCL020W ADI1Q03677 179 aa5.32□□□□□ -1.56
YCL020WYCL020W REC8Q12188 680 aa5.32□□□□□ -1.56
YCL020WYCL020W RAD2P07276 1031 aa5.31□□□□□ -1.56
YCL020WYCL020W SPO74P45819 413 aa5.31□□□□□ -1.56
YCL020WYCL020W YPL034WQ03083 165 aa5.31□□□□□ -1.56
YCL020WYCL020W KAR2P16474 682 aaKnown RBP5.3□□□□□ -1.56
YCL020WYCL020W RSC6P25632 483 aa5.3□□□□□ -1.56
YCL020WYCL020W REI1P38344 393 aaPredicted RBP5.3□□□□□ -1.56
YCL020WYCL020W PRE9P23638 258 aaKnown RBP5.29□□□□□ -1.56
YCL020WYCL020W YKL077WP36081 392 aa5.29□□□□□ -1.56
YCL020WYCL020W GPT2P36148 743 aa5.29□□□□□ -1.56
YCL020WYCL020W ARI1P53111 347 aaKnown RBP5.29□□□□□ -1.56
YCL020WYCL020W YGL140CP53120 1219 aa5.29□□□□□ -1.56
YCL020WYCL020W YNR063WP53749 607 aa5.29□□□□□ -1.56
YCL020WYCL020W FAR11P53917 953 aa5.29□□□□□ -1.56
YCL020WYCL020W MEC3Q02574 474 aa5.29□□□□□ -1.56
YCL020WYCL020W NOG1Q02892 647 aaKnown RBP5.29□□□□□ -1.56
YCL020WYCL020W DOT1Q04089 582 aaKnown RBP5.29□□□□□ -1.56
YCL020WYCL020W DED1P06634 604 aaKnown RBP5.28□□□□□ -1.56
YCL020WYCL020W NMD3P38861 518 aaKnown RBP5.28□□□□□ -1.56
YCL020WYCL020W XKS1P42826 600 aa5.28□□□□□ -1.56
YCL020WYCL020W ELA1P53861 379 aaPredicted RBP5.28□□□□□ -1.56
YCL020WYCL020W YOR223WQ12015 292 aa5.28□□□□□ -1.56
YCL020WYCL020W ASF1P32447 279 aa5.27□□□□□ -1.57
YCL020WYCL020W MRPS18P42847 217 aa5.27□□□□□ -1.57
YCL020WYCL020W GCV1P48015 400 aa5.27□□□□□ -1.57
YCL020WYCL020W YGR045CP53229 120 aa5.27□□□□□ -1.57
YCL020WYCL020W UTP5Q04177 643 aaKnown RBP5.27□□□□□ -1.57
YCL020WYCL020W GLT1Q12680 2145 aaKnown RBP5.27□□□□□ -1.57
YCL020WYCL020W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
YCL020WYCL020W PGM1P33401 570 aaKnown RBP5.25□□□□□ -1.57
YCL020WYCL020W SHU2P38957 223 aa5.25□□□□□ -1.57
YCL020WYCL020W EAR1Q03212 550 aa5.25□□□□□ -1.57
YCL020WYCL020W HDA2Q06629 674 aa5.25□□□□□ -1.57
YCL020WYCL020W GCR1P07261 785 aa5.24□□□□□ -1.57
YCL020WYCL020W COQ2P32378 372 aa5.24□□□□□ -1.57
YCL020WYCL020W WHI3P34761 661 aaKnown RBP5.24□□□□□ -1.57
YCL020WYCL020W YLR122CQ12312 125 aa5.24□□□□□ -1.57
YCL020WYCL020W SEC23P15303 768 aaKnown RBP5.23□□□□□ -1.57
YCL020WYCL020W RDH54P38086 958 aa5.23□□□□□ -1.57
YCL020WYCL020W MSH4P40965 878 aaPredicted RBP5.23□□□□□ -1.57
YCL020WYCL020W MTR4P47047 1073 aaKnown RBP5.23□□□□□ -1.57
YCL020WYCL020W ROD1Q02805 837 aa5.23□□□□□ -1.57
YCL020WYCL020W GIC2Q06648 383 aa5.23□□□□□ -1.57
YCL020WYCL020W MRL1Q06815 381 aa5.23□□□□□ -1.57
YCL020WYCL020W AVO1Q08236 1176 aa5.23□□□□□ -1.57
YCL020WYCL020W MCD1Q12158 566 aa5.23□□□□□ -1.57
YCL020WYCL020W TRP3P00937 484 aa5.23□□□□□ -1.57
YCL020WYCL020W SAF1P38352 637 aa5.23□□□□□ -1.57
YCL020WYCL020W YGR130CP53278 816 aa5.23□□□□□ -1.57
YCL020WYCL020W ESF1Q06344 628 aaKnown RBP5.23□□□□□ -1.57
YCL020WYCL020W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
YCL020WYCL020W YAR028WP39548 234 aa5.22□□□□□ -1.57
YCL020WYCL020W ALO1P54783 526 aaKnown RBP5.22□□□□□ -1.57
YCL020WYCL020W RAT1Q02792 1006 aaKnown RBP5.22□□□□□ -1.57
YCL020WYCL020W JIP5Q06214 492 aaPredicted RBP5.22□□□□□ -1.57
YCL020WYCL020W NFS1P25374 497 aa5.21□□□□□ -1.58
YCL020WYCL020W AFG2P32794 780 aa5.21□□□□□ -1.58
YCL020WYCL020W GNP1P48813 663 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms