RNA–Protein interactions for RNA: YCL010C

SGF29, Transcript of Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes, yeastyeast

Gene SGF29, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF29YCL010C YML037CQ03703 340 aa7.38□□□□□ -1.23
SGF29YCL010C CST9Q06032 482 aa7.38□□□□□ -1.23
SGF29YCL010C YOR111WQ99210 232 aa7.38□□□□□ -1.23
SGF29YCL010C TRL1P09880 827 aaKnown RBP7.37□□□□□ -1.23
SGF29YCL010C SRS2P12954 1174 aa7.37□□□□□ -1.23
SGF29YCL010C HCA4P20448 770 aaKnown RBP7.37□□□□□ -1.23
SGF29YCL010C CRG1P38892 291 aaRIP-Chip data7.37□□□□□ -1.23not detected
SGF29YCL010C UBP9P39967 754 aa7.37□□□□□ -1.23
SGF29YCL010C LYS14P40971 790 aa7.37□□□□□ -1.23
SGF29YCL010C ARP5P53946 755 aa7.37□□□□□ -1.23
SGF29YCL010C SGD1Q06132 899 aa7.37□□□□□ -1.23
SGF29YCL010C EST2Q06163 884 aa7.37□□□□□ -1.23
SGF29YCL010C SKG3Q06315 1026 aa7.37□□□□□ -1.23
SGF29YCL010C RLF2Q12495 606 aa7.37□□□□□ -1.23
SGF29YCL010C RKM4Q12504 494 aa7.37□□□□□ -1.23
SGF29YCL010C SAM1P10659 382 aaKnown RBP7.36□□□□□ -1.23
SGF29YCL010C TPM1P17536 199 aaKnown RBP7.36□□□□□ -1.23
SGF29YCL010C RPL8BP29453 256 aaKnown RBP7.36□□□□□ -1.23
SGF29YCL010C AKR1P39010 764 aa7.36□□□□□ -1.23
SGF29YCL010C FOL1P53848 824 aa7.36□□□□□ -1.23
SGF29YCL010C ERG12P07277 443 aa7.35□□□□□ -1.23
SGF29YCL010C MAK31P23059 88 aa7.35□□□□□ -1.23
SGF29YCL010C YGL015CP33199 130 aa7.35□□□□□ -1.23
SGF29YCL010C MOT2P34909 587 aaKnown RBP7.35□□□□□ -1.23
SGF29YCL010C RPT6Q01939 405 aaKnown RBP7.35□□□□□ -1.23
SGF29YCL010C YDR461C-AQ2V2P7 80 aa7.35□□□□□ -1.23
SGF29YCL010C ERG7P38604 731 aa7.34□□□□□ -1.23
SGF29YCL010C VPS45P38932 577 aa7.34□□□□□ -1.23
SGF29YCL010C UTP4Q06679 776 aaKnown RBP7.34□□□□□ -1.23
SGF29YCL010C UBX5Q06682 500 aa7.34□□□□□ -1.23
SGF29YCL010C TUS1Q06412 1307 aa7.33□□□□□ -1.24
SGF29YCL010C NUC1P08466 329 aa7.33□□□□□ -1.24
SGF29YCL010C SRP54P20424 541 aaKnown RBP7.33□□□□□ -1.24
SGF29YCL010C CDC60P26637 1090 aaKnown RBP7.33□□□□□ -1.24
SGF29YCL010C SHP1P34223 423 aa7.33□□□□□ -1.24
SGF29YCL010C SIS2P36024 562 aa7.33□□□□□ -1.24
SGF29YCL010C RSC30P38781 883 aa7.33□□□□□ -1.24
SGF29YCL010C YGL081WP53156 320 aa7.33□□□□□ -1.24
SGF29YCL010C MYO5Q04439 1219 aaKnown RBP7.33□□□□□ -1.24
SGF29YCL010C CFT2Q12102 859 aaPredicted RBP7.33□□□□□ -1.24
SGF29YCL010C MYO1P08964 1928 aa7.33□□□□□ -1.24
SGF29YCL010C CIT1P00890 479 aa7.32□□□□□ -1.24
SGF29YCL010C RNR2P09938 399 aaKnown RBP7.32□□□□□ -1.24
SGF29YCL010C RAD18P10862 487 aa7.32□□□□□ -1.24
SGF29YCL010C STI1P15705 589 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
SGF29YCL010C FBP26P32604 452 aa7.32□□□□□ -1.24
SGF29YCL010C PAM1P37304 830 aaKnown RBP7.32□□□□□ -1.24
SGF29YCL010C PHO88P38264 188 aaPredicted RBP7.32□□□□□ -1.24
SGF29YCL010C VAB2P40003 282 aa7.32□□□□□ -1.24
SGF29YCL010C SPR3P41901 512 aa7.32□□□□□ -1.24
SGF29YCL010C CTR1P49573 406 aa7.32□□□□□ -1.24
SGF29YCL010C CTF18P49956 741 aa7.32□□□□□ -1.24
SGF29YCL010C GIS4Q04233 774 aa7.32□□□□□ -1.24
SGF29YCL010C YLR225CQ05948 407 aaKnown RBP7.32□□□□□ -1.24
SGF29YCL010C SUB2Q07478 446 aaKnown RBP7.32□□□□□ -1.24
SGF29YCL010C UTR4P32626 227 aa7.31□□□□□ -1.24
SGF29YCL010C SPO22P40511 975 aa7.31□□□□□ -1.24
SGF29YCL010C NET1P47035 1189 aa7.31□□□□□ -1.24
SGF29YCL010C YKE2P52553 114 aa7.31□□□□□ -1.24
SGF29YCL010C ATG1P53104 897 aa7.31□□□□□ -1.24
SGF29YCL010C TMA64Q04600 565 aaKnown RBP7.31□□□□□ -1.24
SGF29YCL010C DUS4Q06063 367 aa7.31□□□□□ -1.24
SGF29YCL010C MET6P05694 767 aaKnown RBP7.3□□□□□ -1.24
SGF29YCL010C VMA2P16140 517 aaKnown RBP7.3□□□□□ -1.24
SGF29YCL010C RNR3P21672 869 aaKnown RBP7.3□□□□□ -1.24
SGF29YCL010C EUG1P32474 517 aa7.3□□□□□ -1.24
SGF29YCL010C MDM1Q01846 1127 aa7.3□□□□□ -1.24
SGF29YCL010C ECM23Q02710 187 aa7.3□□□□□ -1.24
SGF29YCL010C VPS20Q04272 221 aa7.3□□□□□ -1.24
SGF29YCL010C DUS3Q06053 668 aaKnown RBP7.3□□□□□ -1.24
SGF29YCL010C SMD2Q06217 110 aaKnown RBP7.3□□□□□ -1.24
SGF29YCL010C SRF1Q12516 437 aa7.3□□□□□ -1.24
SGF29YCL010C SRP40P32583 406 aaPredicted RBP7.29□□□□□ -1.24
SGF29YCL010C RPN10P38886 268 aaKnown RBP7.29□□□□□ -1.24
SGF29YCL010C ASE1P50275 885 aa7.29□□□□□ -1.24
SGF29YCL010C NCS6P53088 359 aa7.29□□□□□ -1.24
SGF29YCL010C SOL4P53315 255 aa7.29□□□□□ -1.24
SGF29YCL010C BUL2Q03758 920 aaKnown RBP7.29□□□□□ -1.24
SGF29YCL010C YDR341CQ05506 607 aaKnown RBP7.29□□□□□ -1.24
SGF29YCL010C OXR1Q08952 273 aa7.29□□□□□ -1.24
SGF29YCL010C ECM29P38737 1868 aa7.28□□□□□ -1.24
SGF29YCL010C PHR1P05066 565 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
SGF29YCL010C VPS1P21576 704 aaKnown RBP7.28□□□□□ -1.24
SGF29YCL010C SWI4P25302 1093 aaKnown RBP7.28□□□□□ -1.24
SGF29YCL010C PER1P25625 357 aa7.28□□□□□ -1.24
SGF29YCL010C OXP1P28273 1286 aa7.28□□□□□ -1.24
SGF29YCL010C MAL31P38156 614 aa7.28□□□□□ -1.24
SGF29YCL010C ALG2P43636 503 aa7.28□□□□□ -1.24
SGF29YCL010C NPA3P47122 385 aa7.28□□□□□ -1.24
SGF29YCL010C FMS1P50264 508 aa7.28□□□□□ -1.24
SGF29YCL010C YGR273CP53329 174 aa7.28□□□□□ -1.24
SGF29YCL010C BRE5P53741 515 aaKnown RBP7.28□□□□□ -1.24
SGF29YCL010C SLD5Q03406 294 aa7.28□□□□□ -1.24
SGF29YCL010C CSC1Q06538 782 aa7.28□□□□□ -1.24
SGF29YCL010C DSE3Q08729 430 aa7.28□□□□□ -1.24
SGF29YCL010C MATALPHA2P0CY08 210 aa7.27□□□□□ -1.25
SGF29YCL010C HMLALPHA2P0CY09 210 aa7.27□□□□□ -1.25
SGF29YCL010C TGL1P34163 548 aa7.27□□□□□ -1.25
SGF29YCL010C PCI8P40512 444 aa7.27□□□□□ -1.25
SGF29YCL010C BUD6P41697 788 aa7.27□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 83.8 ms