RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C INP52P50942 1183 aa5.83□□□□□ -1.48
NPL4YBR170C HUL5P53119 910 aa5.83□□□□□ -1.48
NPL4YBR170C BUD9P53226 547 aa5.83□□□□□ -1.48
NPL4YBR170C HEH2Q03281 663 aa5.83□□□□□ -1.48
NPL4YBR170C FLP1P03870 423 aa5.82□□□□□ -1.48
NPL4YBR170C MLF3P32047 452 aa5.82□□□□□ -1.48
NPL4YBR170C PGM2P37012 569 aaKnown RBP5.82□□□□□ -1.48
NPL4YBR170C NAB2P32505 525 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
NPL4YBR170C DUT1P33317 147 aa5.82□□□□□ -1.48
NPL4YBR170C YGR053CP53234 283 aa5.82□□□□□ -1.48
NPL4YBR170C POB3Q04636 552 aaKnown RBP5.82□□□□□ -1.48
NPL4YBR170C TSR4P25040 408 aa5.81□□□□□ -1.48
NPL4YBR170C YPL109CQ02981 657 aa5.81□□□□□ -1.48
NPL4YBR170C PRI2P20457 528 aa5.8□□□□□ -1.48
NPL4YBR170C UGA4P32837 571 aa5.8□□□□□ -1.48
NPL4YBR170C OPI10Q08202 246 aa5.8□□□□□ -1.48
NPL4YBR170C PPM2Q08282 695 aa5.8□□□□□ -1.48
NPL4YBR170C RAD4P14736 754 aa5.79□□□□□ -1.48
NPL4YBR170C KAR2P16474 682 aaKnown RBP5.79□□□□□ -1.48
NPL4YBR170C MCM5P29496 775 aaKnown RBP5.79□□□□□ -1.48
NPL4YBR170C SPF1P39986 1215 aaKnown RBP5.79□□□□□ -1.48
NPL4YBR170C TDA5Q06417 326 aaKnown RBP5.79□□□□□ -1.48
NPL4YBR170C TOM20P35180 183 aa5.79□□□□□ -1.48
NPL4YBR170C YJR008WP47085 338 aa5.79□□□□□ -1.48
NPL4YBR170C CTR9P89105 1077 aa5.79□□□□□ -1.48
NPL4YBR170C ULP1Q02724 621 aa5.79□□□□□ -1.48
NPL4YBR170C NAN1Q02931 896 aaKnown RBP5.79□□□□□ -1.48
NPL4YBR170C ADI1Q03677 179 aa5.79□□□□□ -1.48
NPL4YBR170C UBX5Q06682 500 aa5.79□□□□□ -1.48
NPL4YBR170C MET6P05694 767 aaKnown RBP5.78□□□□□ -1.48
NPL4YBR170C KAP122P32767 1081 aa5.78□□□□□ -1.48
NPL4YBR170C YKL069WP36088 180 aa5.78□□□□□ -1.48
NPL4YBR170C ISW1P38144 1129 aa5.78□□□□□ -1.48
NPL4YBR170C BSD2P38356 321 aa5.78□□□□□ -1.48
NPL4YBR170C MNN1P39106 762 aa5.78□□□□□ -1.48
NPL4YBR170C PIC2P40035 300 aa5.78□□□□□ -1.48
NPL4YBR170C NUP82P40368 713 aa5.78□□□□□ -1.48
NPL4YBR170C AI3P03877 415 aa5.77□□□□□ -1.49
NPL4YBR170C GIP1P38229 639 aa5.77□□□□□ -1.49
NPL4YBR170C TIM54P47045 478 aa5.77□□□□□ -1.49
NPL4YBR170C RTS3P53289 263 aa5.77□□□□□ -1.49
NPL4YBR170C GLT1Q12680 2145 aaKnown RBP5.77□□□□□ -1.49
NPL4YBR170C COBP00163 385 aa5.77□□□□□ -1.49
NPL4YBR170C GCR1P07261 785 aa5.77□□□□□ -1.49
NPL4YBR170C RPC31P17890 251 aa5.77□□□□□ -1.49
NPL4YBR170C YBR287WP38355 427 aa5.77□□□□□ -1.49
NPL4YBR170C YHR020WP38708 688 aaKnown RBP5.77□□□□□ -1.49
NPL4YBR170C PRK1P40494 810 aa5.77□□□□□ -1.49
NPL4YBR170C RTT10Q08924 1013 aa5.77□□□□□ -1.49
NPL4YBR170C TIM23P32897 222 aa5.76□□□□□ -1.49
NPL4YBR170C NCL1P38205 684 aaKnown RBP5.76□□□□□ -1.49
NPL4YBR170C MON1P53129 644 aa5.76□□□□□ -1.49
NPL4YBR170C TYW3P53177 273 aa5.76□□□□□ -1.49
NPL4YBR170C YOR296WQ08748 1289 aa5.76□□□□□ -1.49
NPL4YBR170C SAC7P17121 654 aa5.75□□□□□ -1.49
NPL4YBR170C NAR1P23503 491 aaKnown RBP5.75□□□□□ -1.49
NPL4YBR170C GRX4P32642 244 aa5.75□□□□□ -1.49
NPL4YBR170C YJR142WP47173 342 aa5.75□□□□□ -1.49
NPL4YBR170C NUT1P53114 1132 aa5.75□□□□□ -1.49
NPL4YBR170C GIS4Q04233 774 aa5.75□□□□□ -1.49
NPL4YBR170C FAL1Q12099 399 aaKnown RBP5.75□□□□□ -1.49
NPL4YBR170C YGR161W-CQ3E744 92 aa5.75□□□□□ -1.49
NPL4YBR170C SSB1P11484 613 aaKnown RBP5.74□□□□□ -1.49
NPL4YBR170C DUR3P33413 735 aa5.74□□□□□ -1.49
NPL4YBR170C AIM46P38885 310 aa5.74□□□□□ -1.49
NPL4YBR170C CHZ1P40019 153 aaPredicted RBP5.74□□□□□ -1.49
NPL4YBR170C SSB2P40150 613 aaKnown RBP5.74□□□□□ -1.49
NPL4YBR170C AVT1P47082 602 aa5.74□□□□□ -1.49
NPL4YBR170C MSH6Q03834 1242 aa5.74□□□□□ -1.49
NPL4YBR170C EMG1Q06287 252 aaKnown RBP5.74□□□□□ -1.49
NPL4YBR170C PHO8P11491 566 aa5.74□□□□□ -1.49
NPL4YBR170C PGM1P33401 570 aaKnown RBP5.74□□□□□ -1.49
NPL4YBR170C NUG1P40010 520 aaKnown RBP5.74□□□□□ -1.49
NPL4YBR170C YGL081WP53156 320 aa5.74□□□□□ -1.49
NPL4YBR170C EEB1Q02891 456 aa5.74□□□□□ -1.49
NPL4YBR170C UTP14Q04500 899 aaKnown RBP5.74□□□□□ -1.49
NPL4YBR170C COQ2P32378 372 aa5.73□□□□□ -1.49
NPL4YBR170C RVS167P39743 482 aaKnown RBP5.73□□□□□ -1.49
NPL4YBR170C ARI1P53111 347 aaKnown RBP5.73□□□□□ -1.49
NPL4YBR170C FLC1Q08967 793 aa5.73□□□□□ -1.49
NPL4YBR170C BAS1P22035 811 aa5.72□□□□□ -1.49
NPL4YBR170C ECM2P38241 364 aaKnown RBP5.72□□□□□ -1.49
NPL4YBR170C RRM3P38766 723 aa5.72□□□□□ -1.49
NPL4YBR170C RSP5P39940 809 aaKnown RBP5.72□□□□□ -1.49
NPL4YBR170C MRL1Q06815 381 aa5.72□□□□□ -1.49
NPL4YBR170C TMA46Q12000 345 aaKnown RBP5.72□□□□□ -1.49
NPL4YBR170C YLR125WQ12138 136 aa5.72□□□□□ -1.49
NPL4YBR170C PYC2P32327 1180 aaKnown RBP5.71□□□□□ -1.49
NPL4YBR170C GNP1P48813 663 aa5.71□□□□□ -1.49
NPL4YBR170C MED7Q08278 222 aa5.71□□□□□ -1.49
NPL4YBR170C SFA1P32771 386 aa5.71□□□□□ -1.5
NPL4YBR170C STE5P32917 917 aa5.71□□□□□ -1.5
NPL4YBR170C YIL165CP40446 119 aa5.71□□□□□ -1.5
NPL4YBR170C MSH4P40965 878 aaPredicted RBP5.71□□□□□ -1.5
NPL4YBR170C XKS1P42826 600 aa5.71□□□□□ -1.5
NPL4YBR170C SAP155P43612 1002 aa5.71□□□□□ -1.5
NPL4YBR170C SKP1P52286 194 aa5.71□□□□□ -1.5
NPL4YBR170C GAS5Q08193 484 aa5.71□□□□□ -1.5
NPL4YBR170C YBR184WP38299 523 aa5.7□□□□□ -1.5
NPL4YBR170C CUS1Q02554 436 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms