RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W JJJ2P46997 583 aa2.64□□□□□ -1.99
VPS8YAL002W PTK2P47116 818 aaKnown RBP2.64□□□□□ -1.99
VPS8YAL002W FLP1P03870 423 aa2.64□□□□□ -1.99
VPS8YAL002W KRI1P42846 591 aaKnown RBP2.64□□□□□ -1.99
VPS8YAL002W APC11Q12157 165 aa2.64□□□□□ -1.99
VPS8YAL002W IRE1P32361 1115 aa2.64□□□□□ -1.99
VPS8YAL002W SPF1P39986 1215 aaKnown RBP2.64□□□□□ -1.99
VPS8YAL002W NEO1P40527 1151 aa2.64□□□□□ -1.99
VPS8YAL002W CUS1Q02554 436 aaPredicted RBP2.64□□□□□ -1.99
VPS8YAL002W VPS72Q03388 795 aa2.64□□□□□ -1.99
VPS8YAL002W ADI1Q03677 179 aa2.64□□□□□ -1.99
VPS8YAL002W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
VPS8YAL002W RSP5P39940 809 aaKnown RBP2.63□□□□□ -1.99
VPS8YAL002W RGD2P43556 714 aa2.63□□□□□ -1.99
VPS8YAL002W DAS1P47005 663 aa2.63□□□□□ -1.99
VPS8YAL002W DNM1P54861 757 aa2.63□□□□□ -1.99
VPS8YAL002W RPN4Q03465 531 aa2.63□□□□□ -1.99
VPS8YAL002W ECM16Q04217 1267 aaKnown RBP2.63□□□□□ -1.99
VPS8YAL002W YDR306CQ06640 478 aa2.63□□□□□ -1.99
VPS8YAL002W YCF1P39109 1515 aaKnown RBP2.63□□□□□ -1.99
VPS8YAL002W CIT1P00890 479 aa2.63□□□□□ -1.99
VPS8YAL002W TPD3P31383 635 aa2.63□□□□□ -1.99
VPS8YAL002W YKL077WP36081 392 aa2.63□□□□□ -1.99
VPS8YAL002W NIT1P40447 199 aa2.63□□□□□ -1.99
VPS8YAL002W HSV2P50079 448 aaPredicted RBP2.63□□□□□ -1.99
VPS8YAL002W PUF4P25339 888 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
VPS8YAL002W NCL1P38205 684 aaKnown RBP2.63□□□□□ -1.99
VPS8YAL002W ERP6P53198 216 aa2.63□□□□□ -1.99
VPS8YAL002W TFB2Q02939 513 aa2.63□□□□□ -1.99
VPS8YAL002W BPT1P14772 1559 aa2.63□□□□□ -1.99
VPS8YAL002W MCM1P11746 286 aa2.62□□□□□ -1.99
VPS8YAL002W NFS1P25374 497 aa2.62□□□□□ -1.99
VPS8YAL002W AAR2P32357 355 aaPredicted RBP2.62□□□□□ -1.99
VPS8YAL002W AAD14P42884 376 aa2.62□□□□□ -1.99
VPS8YAL002W TPO2P53283 614 aa2.62□□□□□ -1.99
VPS8YAL002W FAP7Q12055 197 aaPredicted RBP2.62□□□□□ -1.99
VPS8YAL002W AIR2Q12476 344 aaKnown RBP2.62□□□□□ -1.99
VPS8YAL002W PYC2P32327 1180 aaKnown RBP2.62□□□□□ -1.99
VPS8YAL002W YKL107WP34251 309 aa2.62□□□□□ -1.99
VPS8YAL002W AIR1P40507 360 aaKnown RBP2.62□□□□□ -1.99
VPS8YAL002W YGL176CP46945 554 aa2.62□□□□□ -1.99
VPS8YAL002W PMT7Q06644 662 aa2.62□□□□□ -1.99
VPS8YAL002W BUD21Q08492 214 aaPredicted RBP2.62□□□□□ -1.99
VPS8YAL002W TMA46Q12000 345 aaKnown RBP2.62□□□□□ -1.99
VPS8YAL002W TRP2P00899 507 aaKnown RBP2.62□□□□□ -1.99
VPS8YAL002W HVG1P0CE11 249 aa2.62□□□□□ -1.99
VPS8YAL002W MSH3P25336 1018 aa2.62□□□□□ -1.99
VPS8YAL002W VBA5P36172 582 aa2.62□□□□□ -1.99
VPS8YAL002W MBP1P39678 833 aa2.62□□□□□ -1.99
VPS8YAL002W ROD1Q02805 837 aa2.62□□□□□ -1.99
VPS8YAL002W YPQ2Q06328 317 aa2.62□□□□□ -1.99
VPS8YAL002W PDC6P26263 563 aaKnown RBP2.61□□□□□ -1.99
VPS8YAL002W NAB2P32505 525 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
VPS8YAL002W KTR2P33550 425 aa2.61□□□□□ -1.99
VPS8YAL002W MRPL16P38064 232 aa2.61□□□□□ -1.99
VPS8YAL002W SHU2P38957 223 aa2.61□□□□□ -1.99
VPS8YAL002W NUT1P53114 1132 aa2.61□□□□□ -1.99
VPS8YAL002W SDA1P53313 767 aaKnown RBP2.61□□□□□ -1.99
VPS8YAL002W YPL109CQ02981 657 aa2.61□□□□□ -1.99
VPS8YAL002W YOR296WQ08748 1289 aa2.61□□□□□ -1.99
VPS8YAL002W LYP1P32487 611 aa2.61□□□□□ -1.99
VPS8YAL002W NAB3P38996 802 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
VPS8YAL002W SAH1P39954 449 aaKnown RBP2.61□□□□□ -1.99
VPS8YAL002W FOL1P53848 824 aa2.61□□□□□ -1.99
VPS8YAL002W RSC4Q02206 625 aa2.61□□□□□ -1.99
VPS8YAL002W MET32Q12041 191 aa2.61□□□□□ -1.99
VPS8YAL002W GIN4Q12263 1142 aa2.61□□□□□ -1.99
VPS8YAL002W RKR1Q04781 1562 aa2.61□□□□□ -1.99
VPS8YAL002W CAN1P04817 590 aa2.61□□□□□ -1.99
VPS8YAL002W SEC23P15303 768 aaKnown RBP2.61□□□□□ -1.99
VPS8YAL002W PAN5P38787 379 aa2.61□□□□□ -1.99
VPS8YAL002W GGA2P38817 585 aaKnown RBP2.61□□□□□ -1.99
VPS8YAL002W RVS167P39743 482 aaKnown RBP2.61□□□□□ -1.99
VPS8YAL002W PIC2P40035 300 aa2.61□□□□□ -1.99
VPS8YAL002W HED1Q03937 162 aa2.61□□□□□ -1.99
VPS8YAL002W SPP382Q06411 708 aaPredicted RBP2.61□□□□□ -1.99
VPS8YAL002W NTG2Q08214 380 aa2.61□□□□□ -1.99
VPS8YAL002W CHZ1P40019 153 aaPredicted RBP2.6□□□□□ -1.99
VPS8YAL002W LSC2P53312 427 aa2.6□□□□□ -1.99
VPS8YAL002W EMG1Q06287 252 aaKnown RBP2.6□□□□□ -1.99
VPS8YAL002W PSH1Q12161 406 aa2.6□□□□□ -1.99
VPS8YAL002W YPR071WQ12346 211 aa2.6□□□□□ -1.99
VPS8YAL002W PHR1P05066 565 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
VPS8YAL002W PRP9P19736 530 aaKnown RBP2.6□□□□□ -1.99
VPS8YAL002W SHM1P37292 490 aaPredicted RBP2.6□□□□□ -1.99
VPS8YAL002W YGR237CP50089 785 aa2.6□□□□□ -1.99
VPS8YAL002W UTP14Q04500 899 aaKnown RBP2.6□□□□□ -1.99
VPS8YAL002W EST2Q06163 884 aa2.6□□□□□ -1.99
VPS8YAL002W AOS1Q06624 347 aa2.6□□□□□ -1.99
VPS8YAL002W TCB1Q12466 1186 aa2.6□□□□□ -1.99
VPS8YAL002W MRP8P35719 219 aa2.6□□□□□ -1.99
VPS8YAL002W TY1B-BRQ12193 1756 aa2.6□□□□□ -1.99
VPS8YAL002W TY1B-GR3Q12316 1755 aa2.6□□□□□ -1.99
VPS8YAL002W TY1B-ORQ92393 1755 aa2.6□□□□□ -1.99
VPS8YAL002W TAF2P23255 1407 aa2.59□□□□□ -1.99
VPS8YAL002W STE5P32917 917 aa2.59□□□□□ -1.99
VPS8YAL002W KRE33P53914 1056 aaKnown RBP2.59□□□□□ -1.99
VPS8YAL002W FMP25Q08023 583 aa2.59□□□□□ -1.99
VPS8YAL002W NOP14Q99207 810 aaKnown RBP2.59□□□□□ -1.99
VPS8YAL002W RAD18P10862 487 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms