RNA–Protein interactions for RNA: ENST00000642114.1

SAMMSON-227, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,199 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-227ENST00000642114 CCNB3Q8WWL7 1395 aa8.78□□□□□ -1
SAMMSON-227ENST00000642114 WASHC2CQ9Y4E1 1318 aa8.78□□□□□ -1
SAMMSON-227ENST00000642114 RCCD1A6NED2 376 aa8.77□□□□□ -1.01
SAMMSON-227ENST00000642114 LCE2BO14633 110 aa8.77□□□□□ -1.01
SAMMSON-227ENST00000642114 FBXO31Q5XUX0 539 aaPredicted RBP8.77□□□□□ -1.01
SAMMSON-227ENST00000642114 POTEAQ6S8J7 498 aa8.77□□□□□ -1.01
SAMMSON-227ENST00000642114 FCHSD2O94868 740 aa8.76□□□□□ -1.01
SAMMSON-227ENST00000642114 LRRC9Q6ZRR7 1453 aa8.76□□□□□ -1.01
SAMMSON-227ENST00000642114 LRRIQ1Q96JM4 1722 aa8.75□□□□□ -1.01
SAMMSON-227ENST00000642114 KIF3BO15066 747 aa8.75□□□□□ -1.01
SAMMSON-227ENST00000642114 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
SAMMSON-227ENST00000642114 FAM161AQ3B820 660 aa8.75□□□□□ -1.01
SAMMSON-227ENST00000642114 SCAF11Q99590 1463 aaKnown RBP8.75□□□□□ -1.01
SAMMSON-227ENST00000642114 MBD5Q9P267 1494 aa8.75□□□□□ -1.01
SAMMSON-227ENST00000642114 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
SAMMSON-227ENST00000642114 CFHP08603 1231 aa8.74□□□□□ -1.01
SAMMSON-227ENST00000642114 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.73□□□□□ -1.01
SAMMSON-227ENST00000642114 SEMA3EO15041 775 aa8.73□□□□□ -1.01
SAMMSON-227ENST00000642114 TLL1O43897 1013 aa8.73□□□□□ -1.01
SAMMSON-227ENST00000642114 SLC19A1P41440 591 aa8.73□□□□□ -1.01
SAMMSON-227ENST00000642114 RSPH4AQ5TD94 716 aa8.73□□□□□ -1.01
SAMMSON-227ENST00000642114 MTUS2Q5JR59 1369 aa8.73□□□□□ -1.01
SAMMSON-227ENST00000642114 CCDC141Q6ZP82 1450 aa8.72□□□□□ -1.01
SAMMSON-227ENST00000642114 OATP04181 439 aa8.72□□□□□ -1.01
SAMMSON-227ENST00000642114 SRCAPQ6ZRS2 3230 aa8.72□□□□□ -1.01
SAMMSON-227ENST00000642114 JCADQ9P266 1359 aa8.71□□□□□ -1.02
SAMMSON-227ENST00000642114 ERVK-7P63135 1459 aa8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 ARHGAP23Q9P227 1491 aa8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 SLIT1O75093 1534 aa8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 ZC3H13Q5T200 1668 aaKnown RBP8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 NR1I2O75469 434 aa8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 S1PR4O95977 384 aa8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 EID1Q9Y6B2 187 aa8.7□□□□□ -1.02
SAMMSON-227ENST00000642114 STRCP1A6NGW2 1772 aa8.69□□□□□ -1.02
SAMMSON-227ENST00000642114 SLC10A3P09131 477 aa8.69□□□□□ -1.02
SAMMSON-227ENST00000642114 ZNF772Q68DY9 489 aaPredicted RBP8.69□□□□□ -1.02
SAMMSON-227ENST00000642114 TMEM94Q12767 1356 aa8.69□□□□□ -1.02
SAMMSON-227ENST00000642114 ABCC3O15438 1527 aa8.69□□□□□ -1.02
SAMMSON-227ENST00000642114 TIAM1Q13009 1591 aa8.69□□□□□ -1.02
SAMMSON-227ENST00000642114 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 ADH1BP00325 375 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 HIC1Q14526 733 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 SPRYD7Q5W111 196 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 ZNF787Q6DD87 383 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 TXNDC2Q86VQ3 553 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 SPATA31A6Q5VVP1 1343 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 ZNF644Q9H582 1327 aaPredicted RBP8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 CEP162Q5TB80 1403 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 NKTRP30414 1462 aaKnown RBP8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 CAMSAP2Q08AD1 1489 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 CDK12Q9NYV4 1490 aaPredicted RBP8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 EHBP1L1Q8N3D4 1523 aa8.68□□□□□ -1.02
SAMMSON-227ENST00000642114 HRCP23327 699 aa8.67□□□□□ -1.02
SAMMSON-227ENST00000642114 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
SAMMSON-227ENST00000642114 FGD6Q6ZV73 1430 aa8.67□□□□□ -1.02
SAMMSON-227ENST00000642114 ZNF598Q86UK7 904 aaKnown RBP8.67□□□□□ -1.02
SAMMSON-227ENST00000642114 ROBO1Q9Y6N7 1651 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 MAP3K1Q13233 1512 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 NCOA2Q15596 1464 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 MSH6P52701 1360 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 TSPY4P0CV99 314 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 TSPY10P0CW01 314 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 KCNA6P17658 529 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 PKDCCQ504Y2 493 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
SAMMSON-227ENST00000642114 PRDM15P57071 1507 aaPredicted RBP8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 ARHGAP31Q2M1Z3 1444 aa8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 TMEM2Q9UHN6 1383 aa8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 LTKP29376 864 aa8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 TRIM67Q6ZTA4 783 aa8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 METTL3Q86U44 580 aaKnown RBP8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 EMID1Q96A84 441 aaPredicted RBP8.65□□□□□ -1.02
SAMMSON-227ENST00000642114 UBR1Q8IWV7 1749 aa8.65□□□□□ -1.03
SAMMSON-227ENST00000642114 RBM26Q5T8P6 1007 aaKnown RBP8.64□□□□□ -1.03
SAMMSON-227ENST00000642114 ZNF697Q5TEC3 545 aa8.64□□□□□ -1.03
SAMMSON-227ENST00000642114 MEX3CQ5U5Q3 659 aaKnown RBP8.64□□□□□ -1.03
SAMMSON-227ENST00000642114 PROSER2Q86WR7 435 aaPredicted RBP8.64□□□□□ -1.03
SAMMSON-227ENST00000642114 SLAIN2Q9P270 581 aa8.64□□□□□ -1.03
SAMMSON-227ENST00000642114 EIF2AK4Q9P2K8 1649 aaKnown RBP8.64□□□□□ -1.03
SAMMSON-227ENST00000642114 ARHGEF5Q12774 1597 aa8.64□□□□□ -1.03
SAMMSON-227ENST00000642114 RXRBP28702 533 aa8.63□□□□□ -1.03
SAMMSON-227ENST00000642114 PUS10Q3MIT2 529 aaKnown RBP8.63□□□□□ -1.03
SAMMSON-227ENST00000642114 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
SAMMSON-227ENST00000642114 NWD1Q149M9 1564 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 GNPATO15228 680 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 DGAT1O75907 488 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 PRR20EP86478 221 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 PRR20CP86479 221 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 PRR20DP86480 221 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 PRR20BP86481 221 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 PRR20AP86496 221 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 SPSB2Q99619 263 aa8.62□□□□□ -1.03
SAMMSON-227ENST00000642114 NCOA3Q9Y6Q9 1424 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms