RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RRS1Q15050 365 aaKnown RBP12.68□□□□□ -0.38
PHGDH-215ENST00000641371 SLIT3O75094 1523 aa12.67□□□□□ -0.38
PHGDH-215ENST00000641371 MAP3K19Q56UN5 1328 aa12.67□□□□□ -0.38
PHGDH-215ENST00000641371 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
PHGDH-215ENST00000641371 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
PHGDH-215ENST00000641371 PEAK1Q9H792 1746 aa12.67□□□□□ -0.38
PHGDH-215ENST00000641371 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
PHGDH-215ENST00000641371 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
PHGDH-215ENST00000641371 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
PHGDH-215ENST00000641371 NFE2L2Q16236 605 aa12.66□□□□□ -0.38
PHGDH-215ENST00000641371 PPP4R2Q9NY27 417 aa12.66□□□□□ -0.38
PHGDH-215ENST00000641371 ALS2Q96Q42 1657 aa12.66□□□□□ -0.38
PHGDH-215ENST00000641371 NFAT5O94916 1531 aa12.66□□□□□ -0.38
PHGDH-215ENST00000641371 ABCC6O95255 1503 aa12.66□□□□□ -0.38
PHGDH-215ENST00000641371 LTN1O94822 1766 aa12.66□□□□□ -0.38
PHGDH-215ENST00000641371 USP19O94966 1318 aa12.65□□□□□ -0.38
PHGDH-215ENST00000641371 KRT28Q7Z3Y7 464 aa12.65□□□□□ -0.38
PHGDH-215ENST00000641371 KDRP35968 1356 aa12.65□□□□□ -0.38
PHGDH-215ENST00000641371 RIPK4P57078 832 aa12.64□□□□□ -0.39
PHGDH-215ENST00000641371 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
PHGDH-215ENST00000641371 ORAI2Q96SN7 254 aa12.64□□□□□ -0.39
PHGDH-215ENST00000641371 FOXO3O43524 673 aa12.63□□□□□ -0.39
PHGDH-215ENST00000641371 IP6K1Q92551 441 aa12.63□□□□□ -0.39
PHGDH-215ENST00000641371 RBM33Q96EV2 1170 aaKnown RBP12.63□□□□□ -0.39
PHGDH-215ENST00000641371 IGSF1Q8N6C5 1336 aa12.62□□□□□ -0.39
PHGDH-215ENST00000641371 MED1Q15648 1581 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-215ENST00000641371 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
PHGDH-215ENST00000641371 HOXC9P31274 260 aa12.62□□□□□ -0.39
PHGDH-215ENST00000641371 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-215ENST00000641371 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
PHGDH-215ENST00000641371 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
PHGDH-215ENST00000641371 FBLN1P23142 703 aa12.61□□□□□ -0.39
PHGDH-215ENST00000641371 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
PHGDH-215ENST00000641371 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
PHGDH-215ENST00000641371 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
PHGDH-215ENST00000641371 HTATSF1O43719 755 aaKnown RBP12.6□□□□□ -0.39
PHGDH-215ENST00000641371 HMOX1P09601 288 aa12.6□□□□□ -0.39
PHGDH-215ENST00000641371 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
PHGDH-215ENST00000641371 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
PHGDH-215ENST00000641371 DLG5Q8TDM6 1919 aa12.6□□□□□ -0.39
PHGDH-215ENST00000641371 FAM208AQ9UK61 1670 aaKnown RBP12.59□□□□□ -0.39
PHGDH-215ENST00000641371 SENP3-EIF4A1A0A087X0R7 540 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 GCP02774 474 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 MS4A1P11836 297 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 GNAI1P63096 354 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 AAMPQ13685 434 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 ILDR2Q71H61 639 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-215ENST00000641371 PXDNQ92626 1479 aa12.59□□□□□ -0.39
PHGDH-215ENST00000641371 SOX12O15370 315 aa12.58□□□□□ -0.4
PHGDH-215ENST00000641371 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.4
PHGDH-215ENST00000641371 PDE3AQ14432 1141 aa12.57□□□□□ -0.4
PHGDH-215ENST00000641371 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
PHGDH-215ENST00000641371 SPATA31A3Q5VYP0 1347 aa12.57□□□□□ -0.4
PHGDH-215ENST00000641371 NHSL1Q5SYE7 1610 aa12.56□□□□□ -0.4
PHGDH-215ENST00000641371 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
PHGDH-215ENST00000641371 EYA1Q99502 592 aa12.56□□□□□ -0.4
PHGDH-215ENST00000641371 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-215ENST00000641371 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
PHGDH-215ENST00000641371 FANCIQ9NVI1 1328 aa12.56□□□□□ -0.4
PHGDH-215ENST00000641371 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
PHGDH-215ENST00000641371 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
PHGDH-215ENST00000641371 BRINP3Q76B58 766 aa12.55□□□□□ -0.4
PHGDH-215ENST00000641371 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
PHGDH-215ENST00000641371 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
PHGDH-215ENST00000641371 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
PHGDH-215ENST00000641371 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-215ENST00000641371 CPDO75976 1380 aa12.55□□□□□ -0.4
PHGDH-215ENST00000641371 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
PHGDH-215ENST00000641371 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
PHGDH-215ENST00000641371 BABAM1Q9NWV8 329 aa12.54□□□□□ -0.4
PHGDH-215ENST00000641371 ZNF853P0CG23 659 aa12.53□□□□□ -0.4
PHGDH-215ENST00000641371 RARSP54136 660 aaKnown RBP12.53□□□□□ -0.4
PHGDH-215ENST00000641371 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-215ENST00000641371 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
PHGDH-215ENST00000641371 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-215ENST00000641371 KIF16BQ96L93 1317 aa12.53□□□□□ -0.4
PHGDH-215ENST00000641371 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
PHGDH-215ENST00000641371 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-215ENST00000641371 AEBP1Q8IUX7 1158 aa12.52□□□□□ -0.41
PHGDH-215ENST00000641371 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.41
PHGDH-215ENST00000641371 CHMP4AQ9BY43 222 aa12.52□□□□□ -0.41
PHGDH-215ENST00000641371 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
PHGDH-215ENST00000641371 XPCQ01831 940 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-215ENST00000641371 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
PHGDH-215ENST00000641371 SOCS7O14512 581 aa12.5□□□□□ -0.41
PHGDH-215ENST00000641371 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-215ENST00000641371 CHMP4BQ9H444 224 aaKnown RBP12.5□□□□□ -0.41
PHGDH-215ENST00000641371 KIAA0232Q92628 1395 aa12.5□□□□□ -0.41
PHGDH-215ENST00000641371 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
PHGDH-215ENST00000641371 LRRC37A3O60309 1634 aa12.5□□□□□ -0.41
PHGDH-215ENST00000641371 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
PHGDH-215ENST00000641371 COL18A1P39060 1754 aa12.49□□□□□ -0.41
PHGDH-215ENST00000641371 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
PHGDH-215ENST00000641371 ERBB3P21860 1342 aa12.49□□□□□ -0.41
PHGDH-215ENST00000641371 GNAT3A8MTJ3 354 aa12.49□□□□□ -0.41
PHGDH-215ENST00000641371 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
PHGDH-215ENST00000641371 ANKRD24Q8TF21 1146 aa12.49□□□□□ -0.41
PHGDH-215ENST00000641371 LTBP4Q8N2S1 1624 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms