RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 GCP02774 474 aa16.93■□□□□ 0.3
MECP2-226ENST00000640414 MARCH10Q8NA82 808 aaPredicted RBP16.93■□□□□ 0.3
MECP2-226ENST00000640414 ARXQ96QS3 562 aa16.93■□□□□ 0.3
MECP2-226ENST00000640414 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
MECP2-226ENST00000640414 BCL9O00512 1426 aa16.92■□□□□ 0.3
MECP2-226ENST00000640414 ARHGEF28Q8N1W1 1705 aaKnown RBP16.92■□□□□ 0.3
MECP2-226ENST00000640414 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
MECP2-226ENST00000640414 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
MECP2-226ENST00000640414 GPR162Q16538 588 aa16.9■□□□□ 0.3
MECP2-226ENST00000640414 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
MECP2-226ENST00000640414 PLEKHG3A1L390 1219 aa16.89■□□□□ 0.29
MECP2-226ENST00000640414 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
MECP2-226ENST00000640414 TOM1L2Q6ZVM7 507 aa16.89■□□□□ 0.29
MECP2-226ENST00000640414 CCDC61Q9Y6R9 512 aa16.89■□□□□ 0.29
MECP2-226ENST00000640414 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
MECP2-226ENST00000640414 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.29
MECP2-226ENST00000640414 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
MECP2-226ENST00000640414 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
MECP2-226ENST00000640414 COL18A1P39060 1754 aa16.85■□□□□ 0.29
MECP2-226ENST00000640414 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
MECP2-226ENST00000640414 CDCA7Q9BWT1 371 aaPredicted RBP16.85■□□□□ 0.29
MECP2-226ENST00000640414 WDR17Q8IZU2 1322 aa16.84■□□□□ 0.29
MECP2-226ENST00000640414 SLIT3O75094 1523 aa16.84■□□□□ 0.29
MECP2-226ENST00000640414 DCAF11Q8TEB1 546 aa16.83■□□□□ 0.28
MECP2-226ENST00000640414 AXIN2Q9Y2T1 843 aa16.83■□□□□ 0.28
MECP2-226ENST00000640414 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
MECP2-226ENST00000640414 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
MECP2-226ENST00000640414 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
MECP2-226ENST00000640414 ZNF827Q17R98 1081 aa16.81■□□□□ 0.28
MECP2-226ENST00000640414 PPIP5K1Q6PFW1 1433 aa16.8■□□□□ 0.28
MECP2-226ENST00000640414 NLRP6P59044 892 aa16.8■□□□□ 0.28
MECP2-226ENST00000640414 EXOC5O00471 708 aa16.79■□□□□ 0.28
MECP2-226ENST00000640414 CARD10Q9BWT7 1032 aa16.78■□□□□ 0.28
MECP2-226ENST00000640414 COL24A1Q17RW2 1714 aa16.78■□□□□ 0.28
MECP2-226ENST00000640414 BRD4O60885 1362 aaPredicted RBP16.77■□□□□ 0.28
MECP2-226ENST00000640414 RGPD5Q99666 1765 aa16.77■□□□□ 0.28
MECP2-226ENST00000640414 NLGN2Q8NFZ4 835 aa16.77■□□□□ 0.28
MECP2-226ENST00000640414 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
MECP2-226ENST00000640414 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.27
MECP2-226ENST00000640414 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
MECP2-226ENST00000640414 USP6P35125 1406 aa16.76■□□□□ 0.27
MECP2-226ENST00000640414 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
MECP2-226ENST00000640414 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
MECP2-226ENST00000640414 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■□□□□ 10
MECP2-226ENST00000640414 POLD1P28340 1107 aa16.75■□□□□ 0.27
MECP2-226ENST00000640414 SLC16A10Q8TF71 515 aa16.75■□□□□ 0.27
MECP2-226ENST00000640414 LRRC4BQ9NT99 713 aa16.75■□□□□ 0.27
MECP2-226ENST00000640414 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
MECP2-226ENST00000640414 BTAF1O14981 1849 aa16.75■□□□□ 0.27
MECP2-226ENST00000640414 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
MECP2-226ENST00000640414 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
MECP2-226ENST00000640414 ARHGEF25Q86VW2 580 aa16.74■□□□□ 0.27
MECP2-226ENST00000640414 STAC3Q96MF2 364 aa16.74■□□□□ 0.27
MECP2-226ENST00000640414 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
MECP2-226ENST00000640414 HSPA6P17066 643 aa16.73■□□□□ 0.27
MECP2-226ENST00000640414 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
MECP2-226ENST00000640414 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
MECP2-226ENST00000640414 ABCC6O95255 1503 aa16.73■□□□□ 0.27
MECP2-226ENST00000640414 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
MECP2-226ENST00000640414 GOLGB1Q14789 3259 aaKnown RBP16.72■□□□□ 0.27
MECP2-226ENST00000640414 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
MECP2-226ENST00000640414 PNPLA7Q6ZV29 1317 aa16.71■□□□□ 0.27
MECP2-226ENST00000640414 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
MECP2-226ENST00000640414 GPBP1L1Q9HC44 474 aaPredicted RBP16.7■□□□□ 0.26
MECP2-226ENST00000640414 SOX12O15370 315 aa16.69■□□□□ 0.26
MECP2-226ENST00000640414 QRICH2Q9H0J4 1663 aa16.69■□□□□ 0.26
MECP2-226ENST00000640414 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
MECP2-226ENST00000640414 KCNH5Q8NCM2 988 aa16.67■□□□□ 0.26
MECP2-226ENST00000640414 NFAT5O94916 1531 aa16.66■□□□□ 0.26
MECP2-226ENST00000640414 KIAA1210Q9ULL0 1709 aa16.66■□□□□ 0.26
MECP2-226ENST00000640414 ADCY9O60503 1353 aa16.65■□□□□ 0.26
MECP2-226ENST00000640414 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
MECP2-226ENST00000640414 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
MECP2-226ENST00000640414 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
MECP2-226ENST00000640414 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
MECP2-226ENST00000640414 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
MECP2-226ENST00000640414 IL2RBP14784 551 aa16.63■□□□□ 0.25
MECP2-226ENST00000640414 KCNQ4P56696 695 aa16.63■□□□□ 0.25
MECP2-226ENST00000640414 TTC21BQ7Z4L5 1316 aa16.63■□□□□ 0.25
MECP2-226ENST00000640414 NLRP2Q9NX02 1062 aa16.62■□□□□ 0.25
MECP2-226ENST00000640414 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
MECP2-226ENST00000640414 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
MECP2-226ENST00000640414 ERBB3P21860 1342 aa16.61■□□□□ 0.25
MECP2-226ENST00000640414 LY75O60449 1722 aa16.59■□□□□ 0.25
MECP2-226ENST00000640414 COL23A1Q86Y22 540 aaPredicted RBP16.58■□□□□ 0.24
MECP2-226ENST00000640414 TTC21AQ8NDW8 1320 aa16.58■□□□□ 0.24
MECP2-226ENST00000640414 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
MECP2-226ENST00000640414 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
MECP2-226ENST00000640414 KIF3CO14782 793 aa16.56■□□□□ 0.24
MECP2-226ENST00000640414 MSH5O43196 834 aa16.56■□□□□ 0.24
MECP2-226ENST00000640414 CD2APQ9Y5K6 639 aa16.56■□□□□ 0.24
MECP2-226ENST00000640414 DNAJC5GQ8N7S2 189 aa16.55■□□□□ 0.24
MECP2-226ENST00000640414 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
MECP2-226ENST00000640414 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
MECP2-226ENST00000640414 LTN1O94822 1766 aa16.54■□□□□ 0.24
MECP2-226ENST00000640414 APLP1P51693 650 aa16.54■□□□□ 0.24
MECP2-226ENST00000640414 ANKRD24Q8TF21 1146 aa16.54■□□□□ 0.24
MECP2-226ENST00000640414 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
MECP2-226ENST00000640414 NSD2O96028 1365 aa16.53■□□□□ 0.24
MECP2-226ENST00000640414 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms