RNA–Protein interactions for RNA: ENST00000640029.1

KCNMA1-276, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-276ENST00000640029 THUMPD2Q9BTF0 503 aaKnown RBP13.17□□□□□ -0.3
KCNMA1-276ENST00000640029 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
KCNMA1-276ENST00000640029 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
KCNMA1-276ENST00000640029 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
KCNMA1-276ENST00000640029 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
KCNMA1-276ENST00000640029 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
KCNMA1-276ENST00000640029 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.16□□□□□ -0.3
KCNMA1-276ENST00000640029 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
KCNMA1-276ENST00000640029 USP31Q70CQ4 1352 aa13.15□□□□□ -0.3
KCNMA1-276ENST00000640029 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
KCNMA1-276ENST00000640029 IGHDP01880 384 aa13.14□□□□□ -0.31
KCNMA1-276ENST00000640029 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-276ENST00000640029 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-276ENST00000640029 HSP90AB2PQ58FF8 381 aa13.14□□□□□ -0.31
KCNMA1-276ENST00000640029 MYH16Q9H6N6 1097 aa13.14□□□□□ -0.31
KCNMA1-276ENST00000640029 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
KCNMA1-276ENST00000640029 SOX12O15370 315 aa13.13□□□□□ -0.31
KCNMA1-276ENST00000640029 NEFMP07197 916 aa13.13□□□□□ -0.31
KCNMA1-276ENST00000640029 FAM83GA6ND36 823 aa13.12□□□□□ -0.31
KCNMA1-276ENST00000640029 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
KCNMA1-276ENST00000640029 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
KCNMA1-276ENST00000640029 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
KCNMA1-276ENST00000640029 SSH1Q8WYL5 1049 aa13.12□□□□□ -0.31
KCNMA1-276ENST00000640029 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
KCNMA1-276ENST00000640029 IL16Q14005 1332 aa13.12□□□□□ -0.31
KCNMA1-276ENST00000640029 ANKLE2Q86XL3 938 aa13.11□□□□□ -0.31
KCNMA1-276ENST00000640029 IPO9Q96P70 1041 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-276ENST00000640029 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
KCNMA1-276ENST00000640029 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
KCNMA1-276ENST00000640029 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-276ENST00000640029 NGDNQ8NEJ9 315 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-276ENST00000640029 NUTM2GQ5VZR2 741 aa13.09□□□□□ -0.31
KCNMA1-276ENST00000640029 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-276ENST00000640029 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
KCNMA1-276ENST00000640029 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
KCNMA1-276ENST00000640029 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
KCNMA1-276ENST00000640029 SULT6B1Q6IMI4 303 aa13.09□□□□□ -0.31
KCNMA1-276ENST00000640029 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 PDE4AP27815 886 aa13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 TTC21AQ8NDW8 1320 aa13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
KCNMA1-276ENST00000640029 TRIM27P14373 513 aa13.07□□□□□ -0.32
KCNMA1-276ENST00000640029 MBIPQ9NS73 344 aa13.06□□□□□ -0.32
KCNMA1-276ENST00000640029 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
KCNMA1-276ENST00000640029 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
KCNMA1-276ENST00000640029 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
KCNMA1-276ENST00000640029 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-276ENST00000640029 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
KCNMA1-276ENST00000640029 VAMP4O75379 141 aa13.05□□□□□ -0.32
KCNMA1-276ENST00000640029 MS4A1P11836 297 aa13.05□□□□□ -0.32
KCNMA1-276ENST00000640029 FOXO3O43524 673 aa13.04□□□□□ -0.32
KCNMA1-276ENST00000640029 NLRP6P59044 892 aa13.04□□□□□ -0.32
KCNMA1-276ENST00000640029 ZKSCAN2Q63HK3 967 aa13.04□□□□□ -0.32
KCNMA1-276ENST00000640029 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
KCNMA1-276ENST00000640029 LTN1O94822 1766 aa13.04□□□□□ -0.32
KCNMA1-276ENST00000640029 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-276ENST00000640029 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
KCNMA1-276ENST00000640029 SBNO1A3KN83 1393 aa13.03□□□□□ -0.32
KCNMA1-276ENST00000640029 ELL2O00472 640 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-276ENST00000640029 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
KCNMA1-276ENST00000640029 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
KCNMA1-276ENST00000640029 KRT24Q2M2I5 525 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 MCM10Q7L590 875 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 EYA1Q99502 592 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 IFT57Q9NWB7 429 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 FLT4P35916 1363 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.32
KCNMA1-276ENST00000640029 RGS3P49796 1198 aa13.02□□□□□ -0.33
KCNMA1-276ENST00000640029 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
KCNMA1-276ENST00000640029 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
KCNMA1-276ENST00000640029 KDRP35968 1356 aa13.01□□□□□ -0.33
KCNMA1-276ENST00000640029 C8orf34Q49A92 452 aa13.01□□□□□ -0.33
KCNMA1-276ENST00000640029 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
KCNMA1-276ENST00000640029 ORAI2Q96SN7 254 aa13.01□□□□□ -0.33
KCNMA1-276ENST00000640029 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
KCNMA1-276ENST00000640029 NFAT5O94916 1531 aa13□□□□□ -0.33
KCNMA1-276ENST00000640029 ARHGEF10O15013 1369 aa13□□□□□ -0.33
KCNMA1-276ENST00000640029 HOXC9P31274 260 aa13□□□□□ -0.33
KCNMA1-276ENST00000640029 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
KCNMA1-276ENST00000640029 MTHFSDQ2M296 383 aaKnown RBP13□□□□□ -0.33
KCNMA1-276ENST00000640029 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
KCNMA1-276ENST00000640029 CRB1P82279 1406 aa13□□□□□ -0.33
KCNMA1-276ENST00000640029 GNAI1P63096 354 aa13□□□□□ -0.33
KCNMA1-276ENST00000640029 ALDH1L2Q3SY69 923 aa12.99□□□□□ -0.33
KCNMA1-276ENST00000640029 ESCO1Q5FWF5 840 aa12.99□□□□□ -0.33
KCNMA1-276ENST00000640029 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-276ENST00000640029 AMPHP49418 695 aa12.98□□□□□ -0.33
KCNMA1-276ENST00000640029 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
KCNMA1-276ENST00000640029 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-276ENST00000640029 MIS18AQ9NYP9 233 aa12.98□□□□□ -0.33
KCNMA1-276ENST00000640029 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-276ENST00000640029 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
KCNMA1-276ENST00000640029 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
KCNMA1-276ENST00000640029 TRPM3Q9HCF6 1732 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms