RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 COG3Q96JB2 828 aa10.6□□□□□ -0.71
PATJ-216ENST00000635214 PRDM15P57071 1507 aaPredicted RBP10.6□□□□□ -0.71
PATJ-216ENST00000635214 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 MCTP1Q6DN14 999 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 RUNDC1Q96C34 613 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 CCP110O43303 1012 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 DHX8Q14562 1220 aaKnown RBP10.59□□□□□ -0.71
PATJ-216ENST00000635214 COG6Q9Y2V7 657 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 CLTCQ00610 1675 aaKnown RBP10.59□□□□□ -0.71
PATJ-216ENST00000635214 FBXO31Q5XUX0 539 aaPredicted RBP10.59□□□□□ -0.71
PATJ-216ENST00000635214 SLC4A10Q6U841 1118 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 RILPL2Q969X0 211 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 NCOA3Q9Y6Q9 1424 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 PLEKHG1Q9ULL1 1385 aa10.59□□□□□ -0.71
PATJ-216ENST00000635214 FOXD4L6Q3SYB3 417 aaPredicted RBP10.58□□□□□ -0.72
PATJ-216ENST00000635214 FOXD4L3Q6VB84 417 aaPredicted RBP10.58□□□□□ -0.72
PATJ-216ENST00000635214 CROCC2H7BZ55 1655 aa10.58□□□□□ -0.72
PATJ-216ENST00000635214 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
PATJ-216ENST00000635214 CCDC47Q96A33 483 aaKnown RBP10.58□□□□□ -0.72
PATJ-216ENST00000635214 NAT10Q9H0A0 1025 aaKnown RBP10.58□□□□□ -0.72
PATJ-216ENST00000635214 USP8P40818 1118 aa10.57□□□□□ -0.72
PATJ-216ENST00000635214 CCDC73Q6ZRK6 1079 aa10.57□□□□□ -0.72
PATJ-216ENST00000635214 TET3O43151 1660 aa10.57□□□□□ -0.72
PATJ-216ENST00000635214 CT47B1P0C2W7 299 aaPredicted RBP10.57□□□□□ -0.72
PATJ-216ENST00000635214 INTS3Q68E01 1043 aaKnown RBP10.57□□□□□ -0.72
PATJ-216ENST00000635214 IDI1Q13907 227 aa10.57□□□□□ -0.72
PATJ-216ENST00000635214 CAVIN1Q6NZI2 390 aaKnown RBP10.57□□□□□ -0.72
PATJ-216ENST00000635214 SMC3Q9UQE7 1217 aa10.57□□□□□ -0.72
PATJ-216ENST00000635214 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
PATJ-216ENST00000635214 CAMSAP1Q5T5Y3 1602 aa10.56□□□□□ -0.72
PATJ-216ENST00000635214 DIAPH1O60610 1272 aaKnown RBP10.56□□□□□ -0.72
PATJ-216ENST00000635214 PDCL2Q8N4E4 241 aa10.56□□□□□ -0.72
PATJ-216ENST00000635214 NGDNQ8NEJ9 315 aaKnown RBP10.56□□□□□ -0.72
PATJ-216ENST00000635214 FRAT2O75474 233 aaPredicted RBP10.55□□□□□ -0.72
PATJ-216ENST00000635214 RBM10P98175 930 aaKnown RBP10.55□□□□□ -0.72
PATJ-216ENST00000635214 PDE4CQ08493 712 aa10.55□□□□□ -0.72
PATJ-216ENST00000635214 RNF20Q5VTR2 975 aa10.55□□□□□ -0.72
PATJ-216ENST00000635214 TSPYL1Q9H0U9 437 aa10.55□□□□□ -0.72
PATJ-216ENST00000635214 ESPNB1AK53 854 aa10.55□□□□□ -0.72
PATJ-216ENST00000635214 AKAP17AQ02040 695 aaKnown RBP10.55□□□□□ -0.72
PATJ-216ENST00000635214 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
PATJ-216ENST00000635214 DZIP1LQ8IYY4 767 aaKnown RBP10.55□□□□□ -0.72
PATJ-216ENST00000635214 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
PATJ-216ENST00000635214 TRIM29Q14134 588 aa10.54□□□□□ -0.72
PATJ-216ENST00000635214 TAF7LQ5H9L4 462 aa10.54□□□□□ -0.72
PATJ-216ENST00000635214 API5Q9BZZ5 524 aaKnown RBP10.54□□□□□ -0.72
PATJ-216ENST00000635214 TSPY26PQ9H489 355 aa10.54□□□□□ -0.72
PATJ-216ENST00000635214 SMG6Q86US8 1419 aaKnown RBP10.54□□□□□ -0.72
PATJ-216ENST00000635214 TRPM2O94759 1503 aa10.54□□□□□ -0.72
PATJ-216ENST00000635214 SPATA31D1Q6ZQQ2 1576 aa10.54□□□□□ -0.72
PATJ-216ENST00000635214 SYNE3Q6ZMZ3 975 aa10.54□□□□□ -0.72
PATJ-216ENST00000635214 SOX12O15370 315 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 MARCH6O60337 910 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 C19orf44Q9H6X5 657 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 DIP2AQ14689 1571 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
PATJ-216ENST00000635214 ADGRB3O60242 1522 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 VPS37CA5D8V6 355 aaPredicted RBP10.53□□□□□ -0.72
PATJ-216ENST00000635214 LRRIQ1Q96JM4 1722 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 AMPHP49418 695 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 MCM2P49736 904 aa10.53□□□□□ -0.72
PATJ-216ENST00000635214 TRIM5Q9C035 493 aa10.52□□□□□ -0.72
PATJ-216ENST00000635214 DEF6Q9H4E7 631 aa10.52□□□□□ -0.72
PATJ-216ENST00000635214 GRPEL1Q9HAV7 217 aa10.52□□□□□ -0.72
PATJ-216ENST00000635214 TOMM22Q9NS69 142 aa10.52□□□□□ -0.72
PATJ-216ENST00000635214 RNF214Q8ND24 703 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 PIP4K2BP78356 416 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 UNC13BO14795 1591 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 UQCRHLA0A096LP55 91 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 UQCRHP07919 91 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 GNAI1P63096 354 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 BCL2L13Q9BXK5 485 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 CHMP3Q9Y3E7 222 aa10.52□□□□□ -0.73
PATJ-216ENST00000635214 NOS1P29475 1434 aa10.51□□□□□ -0.73
PATJ-216ENST00000635214 ANO2Q9NQ90 1003 aa10.51□□□□□ -0.73
PATJ-216ENST00000635214 CPLX1O14810 134 aa10.51□□□□□ -0.73
PATJ-216ENST00000635214 CDC45O75419 566 aa10.51□□□□□ -0.73
PATJ-216ENST00000635214 NBPF8Q3BBV2 869 aa10.51□□□□□ -0.73
PATJ-216ENST00000635214 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.51□□□□□ -0.73
PATJ-216ENST00000635214 GCC2Q8IWJ2 1684 aa10.51□□□□□ -0.73
PATJ-216ENST00000635214 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
PATJ-216ENST00000635214 KIAA0754O94854 1291 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
PATJ-216ENST00000635214 MYO6Q9UM54 1294 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 RALGAPBQ86X10 1494 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 EIF3JO75822 258 aaKnown RBP10.5□□□□□ -0.73
PATJ-216ENST00000635214 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 UBE2Q2Q8WVN8 375 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 NKTRP30414 1462 aaKnown RBP10.5□□□□□ -0.73
PATJ-216ENST00000635214 NSD2O96028 1365 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 PRM3Q9NNZ6 103 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 IQGAP3Q86VI3 1631 aa10.5□□□□□ -0.73
PATJ-216ENST00000635214 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
PATJ-216ENST00000635214 ERLIN1O75477 346 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 ZNF428Q96B54 188 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 BACH2Q9BYV9 841 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 APAF1O14727 1248 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 PPP2R1AP30153 589 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms