RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
SMN2-214ENST00000626847 ZNF142P52746 1687 aaPredicted RBP10.97□□□□□ -0.65
SMN2-214ENST00000626847 APBB1O00213 710 aa10.96□□□□□ -0.65
SMN2-214ENST00000626847 PTPREP23469 700 aa10.96□□□□□ -0.65
SMN2-214ENST00000626847 ANP32AP39687 249 aaKnown RBP10.96□□□□□ -0.65
SMN2-214ENST00000626847 CLK2P49760 499 aaKnown RBP10.96□□□□□ -0.65
SMN2-214ENST00000626847 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.65
SMN2-214ENST00000626847 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.65
SMN2-214ENST00000626847 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 COL9A1P20849 921 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 KDM5CP41229 1560 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 MCM6Q14566 821 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 AXDND1Q5T1B0 1012 aaPredicted RBP10.95□□□□□ -0.66
SMN2-214ENST00000626847 ZNF518AQ6AHZ1 1483 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 AFAP1Q8N556 730 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 BCL2L12Q9HB09 334 aa10.95□□□□□ -0.66
SMN2-214ENST00000626847 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
SMN2-214ENST00000626847 MYO3AQ8NEV4 1616 aa10.94□□□□□ -0.66
SMN2-214ENST00000626847 ZMYM3Q14202 1370 aa10.94□□□□□ -0.66
SMN2-214ENST00000626847 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
SMN2-214ENST00000626847 A6NJR5 290 aa10.93□□□□□ -0.66
SMN2-214ENST00000626847 PPP1R3GB7ZBB8 358 aa10.93□□□□□ -0.66
SMN2-214ENST00000626847 SUPT6HQ7KZ85 1726 aaKnown RBP10.93□□□□□ -0.66
SMN2-214ENST00000626847 ABCA6Q8N139 1617 aa10.93□□□□□ -0.66
SMN2-214ENST00000626847 NBPF26B4DH59 902 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 RAD21O60216 631 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 SULF1Q8IWU6 871 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 PSMD1Q99460 953 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 MROH2AA6NES4 1674 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 HOXB1P14653 301 aaPredicted RBP10.92□□□□□ -0.66
SMN2-214ENST00000626847 EFCAB2Q5VUJ9 269 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 ZNF622Q969S3 477 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMN2-214ENST00000626847 EYA1Q99502 592 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 PDCL3Q9H2J4 239 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 FAM198AQ9UFP1 575 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 TSKSQ9UJT2 592 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 PNMA3Q9UL41 463 aa10.92□□□□□ -0.66
SMN2-214ENST00000626847 VWDEQ8N2E2 1590 aa10.91□□□□□ -0.66
SMN2-214ENST00000626847 NUTM1Q86Y26 1132 aa10.91□□□□□ -0.66
SMN2-214ENST00000626847 CNPY4Q8N129 248 aa10.91□□□□□ -0.66
SMN2-214ENST00000626847 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMN2-214ENST00000626847 SAMD9Q5K651 1589 aa10.9□□□□□ -0.66
SMN2-214ENST00000626847 NEURL4Q96JN8 1562 aa10.9□□□□□ -0.66
SMN2-214ENST00000626847 DDX11L8A8MPP1 907 aa10.9□□□□□ -0.66
SMN2-214ENST00000626847 IGSF3O75054 1194 aa10.9□□□□□ -0.66
SMN2-214ENST00000626847 DNAJB2P25686 324 aa10.9□□□□□ -0.66
SMN2-214ENST00000626847 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
SMN2-214ENST00000626847 C1orf115Q9H7X2 142 aa10.9□□□□□ -0.66
SMN2-214ENST00000626847 MLH3Q9UHC1 1453 aa10.89□□□□□ -0.67
SMN2-214ENST00000626847 TRAK2O60296 914 aa10.89□□□□□ -0.67
SMN2-214ENST00000626847 MMP14P50281 582 aa10.89□□□□□ -0.67
SMN2-214ENST00000626847 RIC3Q7Z5B4 369 aa10.89□□□□□ -0.67
SMN2-214ENST00000626847 TATDN2Q93075 761 aa10.89□□□□□ -0.67
SMN2-214ENST00000626847 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
SMN2-214ENST00000626847 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
SMN2-214ENST00000626847 TRIM44Q96DX7 344 aaPredicted RBP10.88□□□□□ -0.67
SMN2-214ENST00000626847 CD46P15529 392 aa10.87□□□□□ -0.67
SMN2-214ENST00000626847 IRX6P78412 446 aaPredicted RBP10.87□□□□□ -0.67
SMN2-214ENST00000626847 ZNF592Q92610 1267 aa10.87□□□□□ -0.67
SMN2-214ENST00000626847 RNF17Q9BXT8 1623 aaKnown RBP10.87□□□□□ -0.67
SMN2-214ENST00000626847 RFC5P40937 340 aa10.86□□□□□ -0.67
SMN2-214ENST00000626847 ZNF687Q8N1G0 1237 aa10.86□□□□□ -0.67
SMN2-214ENST00000626847 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
SMN2-214ENST00000626847 LIMD1Q9UGP4 676 aa10.86□□□□□ -0.67
SMN2-214ENST00000626847 LRRC7Q96NW7 1537 aa10.86□□□□□ -0.67
SMN2-214ENST00000626847 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
SMN2-214ENST00000626847 A2ML1A8K2U0 1454 aa10.86□□□□□ -0.67
SMN2-214ENST00000626847 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
SMN2-214ENST00000626847 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
SMN2-214ENST00000626847 TAF3Q5VWG9 929 aa10.85□□□□□ -0.67
SMN2-214ENST00000626847 ANKRD13DQ6ZTN6 518 aa10.85□□□□□ -0.67
SMN2-214ENST00000626847 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
SMN2-214ENST00000626847 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
SMN2-214ENST00000626847 RDH13Q8NBN7 331 aa10.85□□□□□ -0.67
SMN2-214ENST00000626847 POLR1AO95602 1720 aaPredicted RBP10.85□□□□□ -0.67
SMN2-214ENST00000626847 FAM193AP78312 1265 aa10.84□□□□□ -0.67
SMN2-214ENST00000626847 CSPP1Q1MSJ5 1256 aa10.84□□□□□ -0.67
SMN2-214ENST00000626847 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
SMN2-214ENST00000626847 BANK1Q8NDB2 785 aa10.84□□□□□ -0.67
SMN2-214ENST00000626847 KCNK17Q96T54 332 aa10.84□□□□□ -0.67
SMN2-214ENST00000626847 SMAP1Q8IYB5 467 aaPredicted RBP10.84□□□□□ -0.67
SMN2-214ENST00000626847 TMEM134Q9H6X4 195 aa10.84□□□□□ -0.67
SMN2-214ENST00000626847 MYO5CQ9NQX4 1742 aa10.83□□□□□ -0.68
SMN2-214ENST00000626847 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
SMN2-214ENST00000626847 SMAPO00193 183 aa10.83□□□□□ -0.68
SMN2-214ENST00000626847 UTP14CQ5TAP6 766 aaKnown RBP10.83□□□□□ -0.68
SMN2-214ENST00000626847 Q6ZNB5 142 aa10.83□□□□□ -0.68
SMN2-214ENST00000626847 CLTCQ00610 1675 aaKnown RBP10.82□□□□□ -0.68
SMN2-214ENST00000626847 PROX2Q3B8N5 592 aa10.82□□□□□ -0.68
SMN2-214ENST00000626847 CC2D2BQ6DHV5 1058 aa10.82□□□□□ -0.68
SMN2-214ENST00000626847 RGS22Q8NE09 1264 aa10.82□□□□□ -0.68
SMN2-214ENST00000626847 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
SMN2-214ENST00000626847 STRCP1A6NGW2 1772 aa10.82□□□□□ -0.68
SMN2-214ENST00000626847 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
SMN2-214ENST00000626847 CDK13Q14004 1512 aaKnown RBP10.81□□□□□ -0.68
SMN2-214ENST00000626847 SPTLC1O15269 473 aa10.81□□□□□ -0.68
SMN2-214ENST00000626847 IRX3P78415 501 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms