RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 MTFR1LQ9H019 292 aa14.04□□□□□ -0.16
SNX9-202ENST00000614703 ZBTB7CA1YPR0 619 aa14.03□□□□□ -0.16
SNX9-202ENST00000614703 C1QTNF8P60827 252 aa14.03□□□□□ -0.16
SNX9-202ENST00000614703 SRPK2P78362 688 aaKnown RBP14.03□□□□□ -0.16
SNX9-202ENST00000614703 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
SNX9-202ENST00000614703 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
SNX9-202ENST00000614703 WNK3Q9BYP7 1800 aa14.02□□□□□ -0.16
SNX9-202ENST00000614703 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.16
SNX9-202ENST00000614703 PPIP5K1Q6PFW1 1433 aa14.02□□□□□ -0.16
SNX9-202ENST00000614703 WDR17Q8IZU2 1322 aa14.02□□□□□ -0.17
SNX9-202ENST00000614703 NLRP6P59044 892 aa14.02□□□□□ -0.17
SNX9-202ENST00000614703 TXNRD1Q16881 649 aa14.02□□□□□ -0.17
SNX9-202ENST00000614703 FHDC1Q9C0D6 1143 aaPredicted RBP14.02□□□□□ -0.17
SNX9-202ENST00000614703 PROM2Q8N271 834 aa14.01□□□□□ -0.17
SNX9-202ENST00000614703 RAB3GAP2Q9H2M9 1393 aa14□□□□□ -0.17
SNX9-202ENST00000614703 EXOC5O00471 708 aa14□□□□□ -0.17
SNX9-202ENST00000614703 MARCH10Q8NA82 808 aaPredicted RBP14□□□□□ -0.17
SNX9-202ENST00000614703 SLIT3O75094 1523 aa14□□□□□ -0.17
SNX9-202ENST00000614703 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
SNX9-202ENST00000614703 PDGFDQ9GZP0 370 aaPredicted RBP13.99□□□□□ -0.17
SNX9-202ENST00000614703 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
SNX9-202ENST00000614703 ARXQ96QS3 562 aa13.98□□□□□ -0.17
SNX9-202ENST00000614703 CARD10Q9BWT7 1032 aa13.98□□□□□ -0.17
SNX9-202ENST00000614703 USP6P35125 1406 aa13.98□□□□□ -0.17
SNX9-202ENST00000614703 COL18A1P39060 1754 aa13.97□□□□□ -0.17
SNX9-202ENST00000614703 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
SNX9-202ENST00000614703 IFFO2Q5TF58 517 aa13.97□□□□□ -0.17
SNX9-202ENST00000614703 CCDC7Q96M83 1385 aa13.96□□□□□ -0.17
SNX9-202ENST00000614703 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
SNX9-202ENST00000614703 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
SNX9-202ENST00000614703 PTF1AQ7RTS3 328 aa13.96□□□□□ -0.17
SNX9-202ENST00000614703 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
SNX9-202ENST00000614703 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.18
SNX9-202ENST00000614703 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
SNX9-202ENST00000614703 GPR162Q16538 588 aa13.95□□□□□ -0.18
SNX9-202ENST00000614703 CABP2Q9NPB3 220 aa13.95□□□□□ -0.18
SNX9-202ENST00000614703 ARHGEF25Q86VW2 580 aa13.94□□□□□ -0.18
SNX9-202ENST00000614703 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
SNX9-202ENST00000614703 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
SNX9-202ENST00000614703 NHSQ6T4R5 1651 aa13.94□□□□□ -0.18
SNX9-202ENST00000614703 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
SNX9-202ENST00000614703 SLC16A10Q8TF71 515 aa13.93□□□□□ -0.18
SNX9-202ENST00000614703 AXIN2Q9Y2T1 843 aa13.93□□□□□ -0.18
SNX9-202ENST00000614703 PIK3C2AO00443 1686 aa13.93□□□□□ -0.18
SNX9-202ENST00000614703 ABCC6O95255 1503 aa13.93□□□□□ -0.18
SNX9-202ENST00000614703 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
SNX9-202ENST00000614703 RGPD5Q99666 1765 aa13.92□□□□□ -0.18
SNX9-202ENST00000614703 POLD1P28340 1107 aa13.92□□□□□ -0.18
SNX9-202ENST00000614703 CEP350Q5VT06 3117 aa13.92□□□□□ -0.18
SNX9-202ENST00000614703 TTC21AQ8NDW8 1320 aa13.91□□□□□ -0.18
SNX9-202ENST00000614703 GOLGB1Q14789 3259 aaKnown RBP13.91□□□□□ -0.18
SNX9-202ENST00000614703 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
SNX9-202ENST00000614703 EVC2Q86UK5 1308 aa13.9□□□□□ -0.18
SNX9-202ENST00000614703 NBPF1Q3BBV0 1214 aa13.89□□□□□ -0.19
SNX9-202ENST00000614703 PAPPAQ13219 1627 aa13.89□□□□□ -0.19
SNX9-202ENST00000614703 TTC21BQ7Z4L5 1316 aa13.89□□□□□ -0.19
SNX9-202ENST00000614703 QSER1Q2KHR3 1735 aa13.88□□□□□ -0.19
SNX9-202ENST00000614703 BTAF1O14981 1849 aa13.87□□□□□ -0.19
SNX9-202ENST00000614703 SOX12O15370 315 aa13.87□□□□□ -0.19
SNX9-202ENST00000614703 GRIN3BO60391 1043 aa13.87□□□□□ -0.19
SNX9-202ENST00000614703 SLC27A3Q5K4L6 730 aa13.87□□□□□ -0.19
SNX9-202ENST00000614703 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
SNX9-202ENST00000614703 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
SNX9-202ENST00000614703 IL2RBP14784 551 aa13.86□□□□□ -0.19
SNX9-202ENST00000614703 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
SNX9-202ENST00000614703 NLRP2Q9NX02 1062 aa13.85□□□□□ -0.19
SNX9-202ENST00000614703 NFAT5O94916 1531 aa13.85□□□□□ -0.19
SNX9-202ENST00000614703 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
SNX9-202ENST00000614703 ZNF827Q17R98 1081 aa13.84□□□□□ -0.19
SNX9-202ENST00000614703 ERBB3P21860 1342 aa13.84□□□□□ -0.19
SNX9-202ENST00000614703 COL24A1Q17RW2 1714 aa13.84□□□□□ -0.19
SNX9-202ENST00000614703 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.2
SNX9-202ENST00000614703 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
SNX9-202ENST00000614703 TFCP2L1Q9NZI6 479 aa13.82□□□□□ -0.2
SNX9-202ENST00000614703 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
SNX9-202ENST00000614703 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
SNX9-202ENST00000614703 LTN1O94822 1766 aa13.8□□□□□ -0.2
SNX9-202ENST00000614703 USP31Q70CQ4 1352 aa13.8□□□□□ -0.2
SNX9-202ENST00000614703 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
SNX9-202ENST00000614703 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
SNX9-202ENST00000614703 MON2Q7Z3U7 1717 aa13.78□□□□□ -0.2
SNX9-202ENST00000614703 ANKRD24Q8TF21 1146 aa13.78□□□□□ -0.2
SNX9-202ENST00000614703 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
SNX9-202ENST00000614703 GPBP1L1Q9HC44 474 aaPredicted RBP13.77□□□□□ -0.21
SNX9-202ENST00000614703 FAM208AQ9UK61 1670 aaKnown RBP13.77□□□□□ -0.21
SNX9-202ENST00000614703 TUBGCP6Q96RT7 1819 aa13.76□□□□□ -0.21
SNX9-202ENST00000614703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.215e-7■■■□□ 15.6
SNX9-202ENST00000614703 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
SNX9-202ENST00000614703 SYTL4Q96C24 671 aaPredicted RBP13.76□□□□□ -0.21
SNX9-202ENST00000614703 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
SNX9-202ENST00000614703 MSH5O43196 834 aa13.75□□□□□ -0.21
SNX9-202ENST00000614703 LY75O60449 1722 aa13.75□□□□□ -0.21
SNX9-202ENST00000614703 ATP10DQ9P241 1426 aa13.74□□□□□ -0.21
SNX9-202ENST00000614703 ROCK2O75116 1388 aaKnown RBP13.74□□□□□ -0.21
SNX9-202ENST00000614703 HSPA6P17066 643 aa13.74□□□□□ -0.21
SNX9-202ENST00000614703 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
SNX9-202ENST00000614703 CD2APQ9Y5K6 639 aa13.74□□□□□ -0.21
SNX9-202ENST00000614703 YBX3P16989 372 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■□□ 14.7
SNX9-202ENST00000614703 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
SNX9-202ENST00000614703 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms