RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
ABCA13-208ENST00000611776 TRDNQ13061 729 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 TTC39AQ5SRH9 613 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 SEPT11Q9NVA2 429 aaKnown RBP8.42□□□□□ -1.06
ABCA13-208ENST00000611776 TEX14Q8IWB6 1497 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 EEA1Q15075 1411 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
ABCA13-208ENST00000611776 KAT6BQ8WYB5 2073 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 DZIP1Q86YF9 867 aaKnown RBP8.42□□□□□ -1.06
ABCA13-208ENST00000611776 SEPT12Q8IYM1 358 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.42□□□□□ -1.06
ABCA13-208ENST00000611776 FMNL1O95466 1100 aaPredicted RBP8.42□□□□□ -1.06
ABCA13-208ENST00000611776 WAPLQ7Z5K2 1190 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 PICK1Q9NRD5 415 aa8.42□□□□□ -1.06
ABCA13-208ENST00000611776 FAM196AQ6ZSG2 479 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 BAZ1AQ9NRL2 1556 aaPredicted RBP8.41□□□□□ -1.06
ABCA13-208ENST00000611776 IPO8O15397 1037 aaKnown RBP8.41□□□□□ -1.06
ABCA13-208ENST00000611776 CABP5Q9NP86 173 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 SETD5Q9C0A6 1442 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 MS4A1P11836 297 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 CCDC57Q2TAC2 916 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 CAVIN4Q5BKX8 364 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 USP47Q96K76 1375 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 GOLGA6L6A8MZA4 724 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 ZC3H12CQ9C0D7 883 aaKnown RBP8.41□□□□□ -1.06
ABCA13-208ENST00000611776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
ABCA13-208ENST00000611776 CCER2I3L3R5 266 aa8.41□□□□□ -1.06
ABCA13-208ENST00000611776 IFIT2P09913 472 aaKnown RBP8.41□□□□□ -1.06
ABCA13-208ENST00000611776 ZBBXA8MT70 800 aa8.4□□□□□ -1.06
ABCA13-208ENST00000611776 BMS1Q14692 1282 aaKnown RBP8.4□□□□□ -1.06
ABCA13-208ENST00000611776 ODF2Q5BJF6 829 aa8.4□□□□□ -1.06
ABCA13-208ENST00000611776 C2orf69Q8N8R5 385 aa8.4□□□□□ -1.06
ABCA13-208ENST00000611776 IFT140Q96RY7 1462 aa8.4□□□□□ -1.06
ABCA13-208ENST00000611776 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.4□□□□□ -1.06
ABCA13-208ENST00000611776 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
ABCA13-208ENST00000611776 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
ABCA13-208ENST00000611776 TNNI2P48788 182 aa8.4□□□□□ -1.07
ABCA13-208ENST00000611776 PDE3AQ14432 1141 aa8.4□□□□□ -1.07
ABCA13-208ENST00000611776 MICAL1Q8TDZ2 1067 aa8.4□□□□□ -1.07
ABCA13-208ENST00000611776 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.07
ABCA13-208ENST00000611776 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.07
ABCA13-208ENST00000611776 RCAN3Q9UKA8 241 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 PIBF1Q8WXW3 757 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 DIAPH1O60610 1272 aaKnown RBP8.39□□□□□ -1.07
ABCA13-208ENST00000611776 PPP4R3AQ6IN85 833 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 SPC25Q9HBM1 224 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 CGNL1Q0VF96 1302 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 GRIN2BQ13224 1484 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 HMMRO75330 724 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 CCDC96Q2M329 555 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 TNRQ92752 1358 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 CPLX3Q8WVH0 158 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 RILPL2Q969X0 211 aa8.39□□□□□ -1.07
ABCA13-208ENST00000611776 MKRN1Q9UHC7 482 aaKnown RBP8.39□□□□□ -1.07
ABCA13-208ENST00000611776 BTBD11A6QL63 1104 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 CSADQ9Y600 493 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 GOLGA6L22H0YM25 854 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 TMOD4Q9NZQ9 345 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 TRIM21P19474 475 aaKnown RBP8.38□□□□□ -1.07
ABCA13-208ENST00000611776 DALRD3Q5D0E6 543 aaKnown RBP8.38□□□□□ -1.07
ABCA13-208ENST00000611776 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
ABCA13-208ENST00000611776 PPIP5K2O43314 1243 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 ATXN8OSP0DMR3 200 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 ERFEQ4G0M1 354 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 NBPF1Q3BBV0 1214 aa8.38□□□□□ -1.07
ABCA13-208ENST00000611776 DNAJC2Q99543 621 aaKnown RBP8.38□□□□□ -1.07
ABCA13-208ENST00000611776 ATAD2BQ9ULI0 1458 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 MYD88Q99836 296 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 PICALMQ13492 652 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 CT47A1Q5JQC4 288 aaPredicted RBP8.37□□□□□ -1.07
ABCA13-208ENST00000611776 CABP1Q9NZU7 370 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 CCDC144AA2RUR9 1427 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 C2CD5Q86YS7 1000 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 ZCRB1Q8TBF4 217 aaKnown RBP8.37□□□□□ -1.07
ABCA13-208ENST00000611776 GTF3C6Q969F1 213 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 ZHX3Q9H4I2 956 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 VPS8Q8N3P4 1428 aa8.37□□□□□ -1.07
ABCA13-208ENST00000611776 BRDTQ58F21 947 aaPredicted RBP8.37□□□□□ -1.07
ABCA13-208ENST00000611776 BCCIPQ9P287 314 aaKnown RBP eCLIP8.37□□□□□ -1.07
ABCA13-208ENST00000611776 KRT18P05783 430 aaKnown RBP8.36□□□□□ -1.07
ABCA13-208ENST00000611776 GADL1Q6ZQY3 521 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 SLC52A1Q9NWF4 448 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 RTEL1-TNFRSF6BF6WH68 1400 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 TRIM29Q14134 588 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 CCDC157Q569K6 752 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 RBM17Q96I25 401 aaKnown RBP8.36□□□□□ -1.07
ABCA13-208ENST00000611776 TPD52L1Q16890 204 aaPredicted RBP8.36□□□□□ -1.07
ABCA13-208ENST00000611776 EYA3Q99504 573 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 FMN1Q68DA7 1419 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 PPP1R42Q7Z4L9 355 aa8.36□□□□□ -1.07
ABCA13-208ENST00000611776 FOSBP53539 338 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
ABCA13-208ENST00000611776 CCDC34Q96HJ3 373 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 ATF7IPQ6VMQ6 1270 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 EXOC6Q8TAG9 804 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
ABCA13-208ENST00000611776 SIL1Q9H173 461 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms