RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 WDR63Q8IWG1 891 aa18.67■□□□□ 0.58
TNXB-208ENST00000611016 CCDC61Q9Y6R9 512 aa18.67■□□□□ 0.58
TNXB-208ENST00000611016 KIAA0586Q9BVV6 1533 aa18.67■□□□□ 0.58
TNXB-208ENST00000611016 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
TNXB-208ENST00000611016 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
TNXB-208ENST00000611016 CT47A1Q5JQC4 288 aaPredicted RBP18.67■□□□□ 0.58
TNXB-208ENST00000611016 PDCP20941 246 aa18.67■□□□□ 0.58
TNXB-208ENST00000611016 MBD3O95983 291 aa18.66■□□□□ 0.58
TNXB-208ENST00000611016 TIAM1Q13009 1591 aa18.66■□□□□ 0.58
TNXB-208ENST00000611016 KCNH5Q8NCM2 988 aa18.66■□□□□ 0.58
TNXB-208ENST00000611016 NACAP1Q9BZK3 213 aa18.66■□□□□ 0.58
TNXB-208ENST00000611016 TMEM132AQ24JP5 1023 aa18.65■□□□□ 0.58
TNXB-208ENST00000611016 AK7Q96M32 723 aa18.65■□□□□ 0.58
TNXB-208ENST00000611016 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
TNXB-208ENST00000611016 FKBP4Q02790 459 aaKnown RBP eCLIP18.65■□□□□ 0.58
TNXB-208ENST00000611016 CDK5RAP3Q96JB5 506 aa18.65■□□□□ 0.58
TNXB-208ENST00000611016 EPRSP07814 1512 aaKnown RBP18.64■□□□□ 0.58
TNXB-208ENST00000611016 CCP110O43303 1012 aa18.64■□□□□ 0.58
TNXB-208ENST00000611016 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
TNXB-208ENST00000611016 KRI1Q8N9T8 703 aaKnown RBP18.64■□□□□ 0.57
TNXB-208ENST00000611016 FCHSD2O94868 740 aa18.64■□□□□ 0.57
TNXB-208ENST00000611016 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
TNXB-208ENST00000611016 NSD3Q9BZ95 1437 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 MRE11P49959 708 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 AACSQ86V21 672 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 RABEP1Q15276 862 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 ODF2Q5BJF6 829 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 CCDC85AQ96PX6 553 aaPredicted RBP18.63■□□□□ 0.57
TNXB-208ENST00000611016 SRGAP3O43295 1099 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 OFD1O75665 1012 aa18.63■□□□□ 0.57
TNXB-208ENST00000611016 MTERF4Q7Z6M4 381 aaKnown RBP18.62■□□□□ 0.57
TNXB-208ENST00000611016 RUFY1Q96T51 708 aa18.62■□□□□ 0.57
TNXB-208ENST00000611016 PDILTQ8N807 584 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
TNXB-208ENST00000611016 STARD3NLO95772 234 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 CCDC141Q6ZP82 1450 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 STK3Q13188 491 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 ZSCAN25Q6NSZ9 544 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 RDXP35241 583 aaKnown RBP18.61■□□□□ 0.57
TNXB-208ENST00000611016 HMGB2P26583 209 aaKnown RBP18.61■□□□□ 0.57
TNXB-208ENST00000611016 MNS1Q8NEH6 495 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
TNXB-208ENST00000611016 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
TNXB-208ENST00000611016 CEBPZQ03701 1054 aaKnown RBP18.6■□□□□ 0.57
TNXB-208ENST00000611016 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
TNXB-208ENST00000611016 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
TNXB-208ENST00000611016 CYP46A1Q9Y6A2 500 aa18.6■□□□□ 0.57
TNXB-208ENST00000611016 TXLNAP40222 546 aa18.6■□□□□ 0.57
TNXB-208ENST00000611016 CCDC173Q0VFZ6 552 aa18.6■□□□□ 0.57
TNXB-208ENST00000611016 MYO6Q9UM54 1294 aa18.6■□□□□ 0.57
TNXB-208ENST00000611016 CCDC69A6NI79 296 aa18.6■□□□□ 0.57
TNXB-208ENST00000611016 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
TNXB-208ENST00000611016 KRT18P05783 430 aaKnown RBP18.6■□□□□ 0.57
TNXB-208ENST00000611016 ERCC4Q92889 916 aaPredicted RBP18.6■□□□□ 0.57
TNXB-208ENST00000611016 ZNF396Q96N95 335 aaPredicted RBP18.6■□□□□ 0.57
TNXB-208ENST00000611016 ZFYVE27Q5T4F4 411 aa18.59■□□□□ 0.57
TNXB-208ENST00000611016 ZSCAN29Q8IWY8 852 aaPredicted RBP18.59■□□□□ 0.57
TNXB-208ENST00000611016 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
TNXB-208ENST00000611016 IGHMBP2P38935 993 aaKnown RBP18.59■□□□□ 0.57
TNXB-208ENST00000611016 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
TNXB-208ENST00000611016 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
TNXB-208ENST00000611016 RAI14Q9P0K7 980 aa18.59■□□□□ 0.57
TNXB-208ENST00000611016 TMOD3Q9NYL9 352 aa18.58■□□□□ 0.57
TNXB-208ENST00000611016 IFT57Q9NWB7 429 aa18.58■□□□□ 0.57
TNXB-208ENST00000611016 KINO60870 393 aaKnown RBP18.58■□□□□ 0.56
TNXB-208ENST00000611016 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
TNXB-208ENST00000611016 ADGRL1O94910 1474 aa18.58■□□□□ 0.56
TNXB-208ENST00000611016 PDIA4P13667 645 aaKnown RBP18.58■□□□□ 0.56
TNXB-208ENST00000611016 STK38Q15208 465 aa18.58■□□□□ 0.56
TNXB-208ENST00000611016 FAM43AQ8N2R8 423 aa18.58■□□□□ 0.56
TNXB-208ENST00000611016 ANKRD1Q15327 319 aa18.57■□□□□ 0.56
TNXB-208ENST00000611016 MCM10Q7L590 875 aa18.57■□□□□ 0.56
TNXB-208ENST00000611016 USHBP1Q8N6Y0 703 aa18.57■□□□□ 0.56
TNXB-208ENST00000611016 WWC2Q6AWC2 1192 aa18.57■□□□□ 0.56
TNXB-208ENST00000611016 TRIM22Q8IYM9 498 aa18.57■□□□□ 0.56
TNXB-208ENST00000611016 TMPOP42166 694 aaKnown RBP18.57■□□□□ 0.56
TNXB-208ENST00000611016 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
TNXB-208ENST00000611016 IL1RAPL2Q9NP60 686 aa18.57■□□□□ 0.56
TNXB-208ENST00000611016 FBXO3Q9UK99 471 aa18.57■□□□□ 0.56
TNXB-208ENST00000611016 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
TNXB-208ENST00000611016 AEBP1Q8IUX7 1158 aa18.56■□□□□ 0.56
TNXB-208ENST00000611016 JMYQ8N9B5 988 aa18.56■□□□□ 0.56
TNXB-208ENST00000611016 LRP2BPQ9P2M1 347 aa18.56■□□□□ 0.56
TNXB-208ENST00000611016 TDO2P48775 406 aa18.56■□□□□ 0.56
TNXB-208ENST00000611016 ZNF771Q7L3S4 317 aaPredicted RBP18.56■□□□□ 0.56
TNXB-208ENST00000611016 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
TNXB-208ENST00000611016 MAP7D2Q96T17 732 aa18.56■□□□□ 0.56
TNXB-208ENST00000611016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.56■□□□□ 0.56
TNXB-208ENST00000611016 HSP90B2PQ58FF3 399 aa18.55■□□□□ 0.56
TNXB-208ENST00000611016 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
TNXB-208ENST00000611016 FOXO3O43524 673 aa18.55■□□□□ 0.56
TNXB-208ENST00000611016 RNF214Q8ND24 703 aa18.55■□□□□ 0.56
TNXB-208ENST00000611016 SMARCE1Q969G3 411 aa18.55■□□□□ 0.56
TNXB-208ENST00000611016 THUMPD2Q9BTF0 503 aaKnown RBP18.55■□□□□ 0.56
TNXB-208ENST00000611016 PHF8Q9UPP1 1060 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 FIBPO43427 364 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 FILIP1LQ4L180 1135 aa18.54■□□□□ 0.56
TNXB-208ENST00000611016 NME9Q86XW9 330 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms