RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CRB1P82279 1406 aa12.79□□□□□ -0.36
SMAD4-215ENST00000592911 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
SMAD4-215ENST00000592911 CDCA7Q9BWT1 371 aaPredicted RBP12.78□□□□□ -0.36
SMAD4-215ENST00000592911 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
SMAD4-215ENST00000592911 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
SMAD4-215ENST00000592911 NLRP13Q86W25 1043 aa12.77□□□□□ -0.37
SMAD4-215ENST00000592911 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
SMAD4-215ENST00000592911 AKAP12Q02952 1782 aa12.76□□□□□ -0.37
SMAD4-215ENST00000592911 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
SMAD4-215ENST00000592911 LRRC37A3O60309 1634 aa12.76□□□□□ -0.37
SMAD4-215ENST00000592911 UTRNP46939 3433 aa12.75□□□□□ -0.37
SMAD4-215ENST00000592911 ACEP12821 1306 aa12.75□□□□□ -0.37
SMAD4-215ENST00000592911 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
SMAD4-215ENST00000592911 ABTB2Q8N961 1025 aa12.75□□□□□ -0.37
SMAD4-215ENST00000592911 BCL11BQ9C0K0 894 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-215ENST00000592911 SLIT3O75094 1523 aa12.74□□□□□ -0.37
SMAD4-215ENST00000592911 ABCC6O95255 1503 aa12.74□□□□□ -0.37
SMAD4-215ENST00000592911 USP35Q9P2H5 1018 aa12.74□□□□□ -0.37
SMAD4-215ENST00000592911 GCP02774 474 aa12.73□□□□□ -0.37
SMAD4-215ENST00000592911 DCAF11Q8TEB1 546 aa12.73□□□□□ -0.37
SMAD4-215ENST00000592911 CDK19Q9BWU1 502 aa12.73□□□□□ -0.37
SMAD4-215ENST00000592911 MAP3K5Q99683 1374 aa12.72□□□□□ -0.37
SMAD4-215ENST00000592911 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
SMAD4-215ENST00000592911 COL18A1P39060 1754 aa12.71□□□□□ -0.37
SMAD4-215ENST00000592911 DDB1Q16531 1140 aa12.71□□□□□ -0.37
SMAD4-215ENST00000592911 QRICH2Q9H0J4 1663 aa12.7□□□□□ -0.38
SMAD4-215ENST00000592911 MYOM1P52179 1685 aa12.7□□□□□ -0.38
SMAD4-215ENST00000592911 PPIP5K1Q6PFW1 1433 aa12.69□□□□□ -0.38
SMAD4-215ENST00000592911 RAB3GAP2Q9H2M9 1393 aa12.69□□□□□ -0.38
SMAD4-215ENST00000592911 WDR17Q8IZU2 1322 aa12.68□□□□□ -0.38
SMAD4-215ENST00000592911 PTGER2P43116 358 aa12.68□□□□□ -0.38
SMAD4-215ENST00000592911 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
SMAD4-215ENST00000592911 MTFR1LQ9H019 292 aa12.68□□□□□ -0.38
SMAD4-215ENST00000592911 USP6P35125 1406 aa12.68□□□□□ -0.38
SMAD4-215ENST00000592911 KCNH5Q8NCM2 988 aa12.67□□□□□ -0.38
SMAD4-215ENST00000592911 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
SMAD4-215ENST00000592911 KDM2AQ9Y2K7 1162 aa12.67□□□□□ -0.38
SMAD4-215ENST00000592911 QSER1Q2KHR3 1735 aa12.67□□□□□ -0.38
SMAD4-215ENST00000592911 CCDC7Q96M83 1385 aa12.67□□□□□ -0.38
SMAD4-215ENST00000592911 TRPM1Q7Z4N2 1603 aa12.66□□□□□ -0.38
SMAD4-215ENST00000592911 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
SMAD4-215ENST00000592911 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-215ENST00000592911 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-215ENST00000592911 NHSQ6T4R5 1651 aa12.66□□□□□ -0.38
SMAD4-215ENST00000592911 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
SMAD4-215ENST00000592911 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
SMAD4-215ENST00000592911 SLC15A2Q16348 729 aa12.65□□□□□ -0.38
SMAD4-215ENST00000592911 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.38
SMAD4-215ENST00000592911 CARD10Q9BWT7 1032 aa12.65□□□□□ -0.38
SMAD4-215ENST00000592911 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
SMAD4-215ENST00000592911 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
SMAD4-215ENST00000592911 TNS2Q63HR2 1409 aa12.64□□□□□ -0.39
SMAD4-215ENST00000592911 NLRP6P59044 892 aa12.64□□□□□ -0.39
SMAD4-215ENST00000592911 PROM2Q8N271 834 aa12.64□□□□□ -0.39
SMAD4-215ENST00000592911 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
SMAD4-215ENST00000592911 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
SMAD4-215ENST00000592911 KAT6BQ8WYB5 2073 aa12.63□□□□□ -0.39
SMAD4-215ENST00000592911 PAPPAQ13219 1627 aa12.63□□□□□ -0.39
SMAD4-215ENST00000592911 SRPK2P78362 688 aaKnown RBP12.63□□□□□ -0.39
SMAD4-215ENST00000592911 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
SMAD4-215ENST00000592911 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
SMAD4-215ENST00000592911 USP54Q70EL1 1684 aa12.63□□□□□ -0.39
SMAD4-215ENST00000592911 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
SMAD4-215ENST00000592911 RGPD5Q99666 1765 aa12.62□□□□□ -0.39
SMAD4-215ENST00000592911 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
SMAD4-215ENST00000592911 ARHGEF25Q86VW2 580 aa12.62□□□□□ -0.39
SMAD4-215ENST00000592911 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
SMAD4-215ENST00000592911 EXOC5O00471 708 aa12.61□□□□□ -0.39
SMAD4-215ENST00000592911 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
SMAD4-215ENST00000592911 SLC16A10Q8TF71 515 aa12.61□□□□□ -0.39
SMAD4-215ENST00000592911 FHDC1Q9C0D6 1143 aaPredicted RBP12.61□□□□□ -0.39
SMAD4-215ENST00000592911 NFAT5O94916 1531 aa12.59□□□□□ -0.39
SMAD4-215ENST00000592911 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
SMAD4-215ENST00000592911 ARXQ96QS3 562 aa12.59□□□□□ -0.39
SMAD4-215ENST00000592911 BTAF1O14981 1849 aa12.59□□□□□ -0.39
SMAD4-215ENST00000592911 EVC2Q86UK5 1308 aa12.59□□□□□ -0.39
SMAD4-215ENST00000592911 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
SMAD4-215ENST00000592911 CABP1Q9NZU7 370 aa12.57□□□□□ -0.4
SMAD4-215ENST00000592911 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
SMAD4-215ENST00000592911 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
SMAD4-215ENST00000592911 MON2Q7Z3U7 1717 aa12.57□□□□□ -0.4
SMAD4-215ENST00000592911 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
SMAD4-215ENST00000592911 PDGFDQ9GZP0 370 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-215ENST00000592911 CABP2Q9NPB3 220 aa12.56□□□□□ -0.4
SMAD4-215ENST00000592911 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
SMAD4-215ENST00000592911 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
SMAD4-215ENST00000592911 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
SMAD4-215ENST00000592911 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
SMAD4-215ENST00000592911 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
SMAD4-215ENST00000592911 POLD1P28340 1107 aa12.54□□□□□ -0.4
SMAD4-215ENST00000592911 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
SMAD4-215ENST00000592911 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
SMAD4-215ENST00000592911 LTN1O94822 1766 aa12.53□□□□□ -0.4
SMAD4-215ENST00000592911 NBPF1Q3BBV0 1214 aa12.53□□□□□ -0.4
SMAD4-215ENST00000592911 ERBB3P21860 1342 aa12.53□□□□□ -0.4
SMAD4-215ENST00000592911 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
SMAD4-215ENST00000592911 GRIN3BO60391 1043 aa12.52□□□□□ -0.41
SMAD4-215ENST00000592911 IL2RBP14784 551 aa12.52□□□□□ -0.41
SMAD4-215ENST00000592911 LY75O60449 1722 aa12.51□□□□□ -0.41
SMAD4-215ENST00000592911 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms