RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
LINC00662-206ENST00000590523 IFT57Q9NWB7 429 aa15.99■□□□□ 0.15
LINC00662-206ENST00000590523 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
LINC00662-206ENST00000590523 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
LINC00662-206ENST00000590523 EDC4Q6P2E9 1401 aaKnown RBP15.99■□□□□ 0.15
LINC00662-206ENST00000590523 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
LINC00662-206ENST00000590523 AGLP35573 1532 aa15.99■□□□□ 0.15
LINC00662-206ENST00000590523 CHD1LQ86WJ1 897 aa15.98■□□□□ 0.15
LINC00662-206ENST00000590523 SNX21Q969T3 373 aa15.98■□□□□ 0.15
LINC00662-206ENST00000590523 SETD1AO15047 1707 aaKnown RBP15.98■□□□□ 0.15
LINC00662-206ENST00000590523 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
LINC00662-206ENST00000590523 MCM4P33991 863 aa15.98■□□□□ 0.15
LINC00662-206ENST00000590523 BMP2KLQ5H9B9 411 aa15.98■□□□□ 0.15
LINC00662-206ENST00000590523 FSD2A1L4K1 749 aa15.97■□□□□ 0.15
LINC00662-206ENST00000590523 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
LINC00662-206ENST00000590523 CPSF1Q10570 1443 aaKnown RBP15.96■□□□□ 0.15
LINC00662-206ENST00000590523 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.15
LINC00662-206ENST00000590523 NCOA3Q9Y6Q9 1424 aa15.95■□□□□ 0.14
LINC00662-206ENST00000590523 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
LINC00662-206ENST00000590523 MRPL50Q8N5N7 158 aaKnown RBP15.95■□□□□ 0.14
LINC00662-206ENST00000590523 CFAP44Q96MT7 982 aa15.95■□□□□ 0.14
LINC00662-206ENST00000590523 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
LINC00662-206ENST00000590523 GOLGA6L3A6NEY3 463 aa15.95■□□□□ 0.14
LINC00662-206ENST00000590523 DDX11L8A8MPP1 907 aa15.95■□□□□ 0.14
LINC00662-206ENST00000590523 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
LINC00662-206ENST00000590523 VAMP4O75379 141 aa15.95■□□□□ 0.14
LINC00662-206ENST00000590523 CIZ1Q9ULV3 898 aaPredicted RBP15.95■□□□□ 0.14
LINC00662-206ENST00000590523 FBXO31Q5XUX0 539 aaPredicted RBP15.94■□□□□ 0.14
LINC00662-206ENST00000590523 ESF1Q9H501 851 aaKnown RBP15.94■□□□□ 0.14
LINC00662-206ENST00000590523 RIMS2Q9UQ26 1411 aa15.94■□□□□ 0.14
LINC00662-206ENST00000590523 ZNF853P0CG23 659 aa15.93■□□□□ 0.14
LINC00662-206ENST00000590523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC00662-206ENST00000590523 ABCC4O15439 1325 aa15.93■□□□□ 0.14
LINC00662-206ENST00000590523 HSP90AA1P07900 732 aaKnown RBP15.93■□□□□ 0.14
LINC00662-206ENST00000590523 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
LINC00662-206ENST00000590523 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
LINC00662-206ENST00000590523 LNPKQ9C0E8 428 aa15.93■□□□□ 0.14
LINC00662-206ENST00000590523 PTMSP20962 102 aa15.92■□□□□ 0.14
LINC00662-206ENST00000590523 IL13P35225 146 aa15.92■□□□□ 0.14
LINC00662-206ENST00000590523 HSP90AA2PQ14568 343 aaPredicted RBP15.92■□□□□ 0.14
LINC00662-206ENST00000590523 KNDC1Q76NI1 1749 aa15.92■□□□□ 0.14
LINC00662-206ENST00000590523 MON2Q7Z3U7 1717 aa15.92■□□□□ 0.14
LINC00662-206ENST00000590523 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.91■□□□□ 0.14
LINC00662-206ENST00000590523 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
LINC00662-206ENST00000590523 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
LINC00662-206ENST00000590523 WASLO00401 505 aaPredicted RBP15.9■□□□□ 0.14
LINC00662-206ENST00000590523 PHACTR3Q96KR7 559 aa15.9■□□□□ 0.14
LINC00662-206ENST00000590523 XRCC6P12956 609 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC00662-206ENST00000590523 ANKRD45Q5TZF3 282 aa15.9■□□□□ 0.14
LINC00662-206ENST00000590523 NAP1L5Q96NT1 182 aaPredicted RBP15.9■□□□□ 0.14
LINC00662-206ENST00000590523 DDIT3P35638 169 aa15.89■□□□□ 0.13
LINC00662-206ENST00000590523 MRE11P49959 708 aa15.89■□□□□ 0.13
LINC00662-206ENST00000590523 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
LINC00662-206ENST00000590523 MBIPQ9NS73 344 aa15.89■□□□□ 0.13
LINC00662-206ENST00000590523 AKAP12Q02952 1782 aa15.88■□□□□ 0.13
LINC00662-206ENST00000590523 TRAK2O60296 914 aa15.88■□□□□ 0.13
LINC00662-206ENST00000590523 HMOX1P09601 288 aa15.88■□□□□ 0.13
LINC00662-206ENST00000590523 TWISTNBQ3B726 338 aaPredicted RBP15.88■□□□□ 0.13
LINC00662-206ENST00000590523 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
LINC00662-206ENST00000590523 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
LINC00662-206ENST00000590523 COG3Q96JB2 828 aa15.88■□□□□ 0.13
LINC00662-206ENST00000590523 ITSN1Q15811 1721 aa15.88■□□□□ 0.13
LINC00662-206ENST00000590523 TECPR2O15040 1411 aa15.87■□□□□ 0.13
LINC00662-206ENST00000590523 EMILIN1Q9Y6C2 1016 aa15.87■□□□□ 0.13
LINC00662-206ENST00000590523 NRXN3Q9Y4C0 1643 aa15.87■□□□□ 0.13
LINC00662-206ENST00000590523 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
LINC00662-206ENST00000590523 HDGFP51858 240 aaKnown RBP15.87■□□□□ 0.13
LINC00662-206ENST00000590523 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
LINC00662-206ENST00000590523 C3P01024 1663 aa15.87■□□□□ 0.13
LINC00662-206ENST00000590523 NRKQ7Z2Y5 1582 aa15.86■□□□□ 0.13
LINC00662-206ENST00000590523 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
LINC00662-206ENST00000590523 SKOR2Q2VWA4 1001 aaPredicted RBP15.85■□□□□ 0.13
LINC00662-206ENST00000590523 TSPYL6Q8N831 410 aa15.85■□□□□ 0.13
LINC00662-206ENST00000590523 ZMYND15Q9H091 742 aa15.85■□□□□ 0.13
LINC00662-206ENST00000590523 CPS1P31327 1500 aa15.85■□□□□ 0.13
LINC00662-206ENST00000590523 CDC45O75419 566 aa15.85■□□□□ 0.13
LINC00662-206ENST00000590523 NME9Q86XW9 330 aa15.85■□□□□ 0.13
LINC00662-206ENST00000590523 VSIG10Q8N0Z9 540 aa15.84■□□□□ 0.13
LINC00662-206ENST00000590523 NUDT16Q96DE0 195 aaKnown RBP15.84■□□□□ 0.13
LINC00662-206ENST00000590523 TBC1D9Q6ZT07 1266 aa15.83■□□□□ 0.13
LINC00662-206ENST00000590523 THUMPD2Q9BTF0 503 aaKnown RBP15.83■□□□□ 0.13
LINC00662-206ENST00000590523 SIRT2Q8IXJ6 389 aa15.83■□□□□ 0.12
LINC00662-206ENST00000590523 TPM2P07951 284 aa15.82■□□□□ 0.12
LINC00662-206ENST00000590523 RAB3GAP1Q15042 981 aa15.82■□□□□ 0.12
LINC00662-206ENST00000590523 INTS3Q68E01 1043 aaKnown RBP15.82■□□□□ 0.12
LINC00662-206ENST00000590523 K7ELQ4 463 aaPredicted RBP15.82■□□□□ 0.12
LINC00662-206ENST00000590523 FBLN1P23142 703 aa15.82■□□□□ 0.12
LINC00662-206ENST00000590523 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
LINC00662-206ENST00000590523 KIF2CQ99661 725 aa15.82■□□□□ 0.12
LINC00662-206ENST00000590523 DCTPP1Q9H773 170 aa15.82■□□□□ 0.12
LINC00662-206ENST00000590523 KIAA0232Q92628 1395 aa15.81■□□□□ 0.12
LINC00662-206ENST00000590523 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
LINC00662-206ENST00000590523 METP08581 1390 aa15.8■□□□□ 0.12
LINC00662-206ENST00000590523 RPAP2Q8IXW5 612 aaPredicted RBP15.8■□□□□ 0.12
LINC00662-206ENST00000590523 TNPO1Q92973 898 aaKnown RBP15.8■□□□□ 0.12
LINC00662-206ENST00000590523 ESPNB1AK53 854 aa15.79■□□□□ 0.12
LINC00662-206ENST00000590523 ELL2O00472 640 aaPredicted RBP15.79■□□□□ 0.12
LINC00662-206ENST00000590523 PTPRCP08575 1304 aa15.79■□□□□ 0.12
LINC00662-206ENST00000590523 RABEP1Q15276 862 aa15.78■□□□□ 0.12
LINC00662-206ENST00000590523 ANKRD44Q8N8A2 993 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms