RNA–Protein interactions for RNA: ENST00000588843.1

AC012254.4-201, humanhuman

BASIC

Gene AC012254.4, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012254.4-201ENST00000588843 PIK3CDO00329 1044 aa8.6□□□□□ -1.03
AC012254.4-201ENST00000588843 PLPP7Q8NBV4 271 aa8.6□□□□□ -1.03
AC012254.4-201ENST00000588843 SIRT1Q96EB6 747 aa8.6□□□□□ -1.03
AC012254.4-201ENST00000588843 OCSTAMPQ9BR26 566 aa8.6□□□□□ -1.03
AC012254.4-201ENST00000588843 PCDH10Q9P2E7 1040 aa8.6□□□□□ -1.03
AC012254.4-201ENST00000588843 FAM196BA6NMK8 535 aa8.59□□□□□ -1.03
AC012254.4-201ENST00000588843 ITGBL1O95965 494 aaPredicted RBP8.59□□□□□ -1.03
AC012254.4-201ENST00000588843 ATP1A2P50993 1020 aa8.59□□□□□ -1.03
AC012254.4-201ENST00000588843 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
AC012254.4-201ENST00000588843 CDCA8Q53HL2 280 aa8.59□□□□□ -1.03
AC012254.4-201ENST00000588843 KANK4Q5T7N3 995 aaPredicted RBP8.59□□□□□ -1.03
AC012254.4-201ENST00000588843 MKRN1Q9UHC7 482 aaKnown RBP8.59□□□□□ -1.03
AC012254.4-201ENST00000588843 NCOA4Q13772 614 aa8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 FAM174AQ8TBP5 190 aa8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 DOLKQ9UPQ8 538 aa8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 NOD1Q9Y239 953 aa8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
AC012254.4-201ENST00000588843 SEPT12Q8IYM1 358 aa8.57□□□□□ -1.04
AC012254.4-201ENST00000588843 PHTF2Q8N3S3 785 aa8.57□□□□□ -1.04
AC012254.4-201ENST00000588843 NOVA2Q9UNW9 492 aaKnown RBP8.57□□□□□ -1.04
AC012254.4-201ENST00000588843 RASA1P20936 1047 aa8.56□□□□□ -1.04
AC012254.4-201ENST00000588843 WNT7BP56706 349 aa8.56□□□□□ -1.04
AC012254.4-201ENST00000588843 TRMT44Q8IYL2 757 aaKnown RBP8.56□□□□□ -1.04
AC012254.4-201ENST00000588843 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
AC012254.4-201ENST00000588843 CHIC2Q9UKJ5 165 aa8.56□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L15C9J2P7 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L13C9JLJ4 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L11C9JVI0 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L21D6R901 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L18D6R9N7 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L22D6RA61 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L17D6RBQ6 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L19D6RCP7 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L20D6RJB6 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 USP17L24Q0WX57 530 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 FOXJ1Q92949 421 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 C1QTNF2Q9BXJ5 285 aa8.55□□□□□ -1.04
AC012254.4-201ENST00000588843 RPIAP49247 311 aa8.54□□□□□ -1.04
AC012254.4-201ENST00000588843 TRIM32Q13049 653 aa8.54□□□□□ -1.04
AC012254.4-201ENST00000588843 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
AC012254.4-201ENST00000588843 RNF223E7ERA6 249 aa8.53□□□□□ -1.04
AC012254.4-201ENST00000588843 SH3BP2P78314 561 aa8.53□□□□□ -1.04
AC012254.4-201ENST00000588843 USP4Q13107 963 aa8.53□□□□□ -1.04
AC012254.4-201ENST00000588843 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
AC012254.4-201ENST00000588843 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
AC012254.4-201ENST00000588843 TMEM88BA6NKF7 163 aa8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 GIGYF1O75420 1035 aaPredicted RBP8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 CD2BP2O95400 341 aaKnown RBP8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 MAP4K5Q9Y4K4 846 aa8.52□□□□□ -1.05
AC012254.4-201ENST00000588843 MYCP01106 439 aaPredicted RBP8.51□□□□□ -1.05
AC012254.4-201ENST00000588843 PTK7Q13308 1070 aa8.51□□□□□ -1.05
AC012254.4-201ENST00000588843 TMCO4Q5TGY1 634 aa8.51□□□□□ -1.05
AC012254.4-201ENST00000588843 ANKMY2Q8IV38 441 aa8.51□□□□□ -1.05
AC012254.4-201ENST00000588843 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
AC012254.4-201ENST00000588843 ESPNB1AK53 854 aa8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 PPEF1O14829 653 aaPredicted RBP8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 SWI5Q1ZZU3 235 aa8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 CRTC2Q53ET0 693 aaPredicted RBP8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 TMEM164Q5U3C3 297 aa8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 EHBP1Q8NDI1 1231 aa8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 PCDHB11Q9Y5F2 797 aa8.5□□□□□ -1.05
AC012254.4-201ENST00000588843 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
AC012254.4-201ENST00000588843 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
AC012254.4-201ENST00000588843 KCTD15Q96SI1 283 aaPredicted RBP8.49□□□□□ -1.05
AC012254.4-201ENST00000588843 ZMIZ1Q9ULJ6 1067 aa8.49□□□□□ -1.05
AC012254.4-201ENST00000588843 GTF2IP78347 998 aa8.48□□□□□ -1.05
AC012254.4-201ENST00000588843 PSME1Q06323 249 aa8.48□□□□□ -1.05
AC012254.4-201ENST00000588843 DHX9Q08211 1270 aaKnown RBP8.48□□□□□ -1.05
AC012254.4-201ENST00000588843 CCER1Q8TC90 406 aaPredicted RBP8.48□□□□□ -1.05
AC012254.4-201ENST00000588843 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
AC012254.4-201ENST00000588843 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
AC012254.4-201ENST00000588843 PPP1R18Q6NYC8 613 aa8.47□□□□□ -1.05
AC012254.4-201ENST00000588843 SIX5Q8N196 739 aa8.47□□□□□ -1.05
AC012254.4-201ENST00000588843 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
AC012254.4-201ENST00000588843 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
AC012254.4-201ENST00000588843 SEC13P55735 322 aa8.46□□□□□ -1.06
AC012254.4-201ENST00000588843 DPYDQ12882 1025 aa8.46□□□□□ -1.06
AC012254.4-201ENST00000588843 SPNS2Q8IVW8 549 aa8.46□□□□□ -1.06
AC012254.4-201ENST00000588843 CLP1Q92989 425 aaKnown RBP8.46□□□□□ -1.06
AC012254.4-201ENST00000588843 CCDC102BQ68D86 513 aa8.45□□□□□ -1.06
AC012254.4-201ENST00000588843 MPNDQ8N594 471 aa8.45□□□□□ -1.06
AC012254.4-201ENST00000588843 RAB15P59190 212 aa8.44□□□□□ -1.06
AC012254.4-201ENST00000588843 CLDN10P78369 228 aa8.44□□□□□ -1.06
AC012254.4-201ENST00000588843 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
AC012254.4-201ENST00000588843 IVNS1ABPQ9Y6Y0 642 aa8.44□□□□□ -1.06
AC012254.4-201ENST00000588843 ARID4AP29374 1257 aaPredicted RBP8.43□□□□□ -1.06
AC012254.4-201ENST00000588843 SKOR1P84550 965 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms