RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 COG3Q96JB2 828 aa19.2■□□□□ 0.66
KDM4B-206ENST00000588361 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
KDM4B-206ENST00000588361 ARHGEF40Q8TER5 1519 aa19.2■□□□□ 0.66
KDM4B-206ENST00000588361 TWISTNBQ3B726 338 aaPredicted RBP19.2■□□□□ 0.66
KDM4B-206ENST00000588361 ESF1Q9H501 851 aaKnown RBP19.2■□□□□ 0.66
KDM4B-206ENST00000588361 ERBB4Q15303 1308 aa19.19■□□□□ 0.66
KDM4B-206ENST00000588361 IL13P35225 146 aa19.19■□□□□ 0.66
KDM4B-206ENST00000588361 MRPL50Q8N5N7 158 aaKnown RBP19.19■□□□□ 0.66
KDM4B-206ENST00000588361 FSD2A1L4K1 749 aa19.19■□□□□ 0.66
KDM4B-206ENST00000588361 ZBTB7BO15156 539 aaPredicted RBP19.19■□□□□ 0.66
KDM4B-206ENST00000588361 KRT24Q2M2I5 525 aa19.19■□□□□ 0.66
KDM4B-206ENST00000588361 TRAK2O60296 914 aa19.18■□□□□ 0.66
KDM4B-206ENST00000588361 HSCBQ8IWL3 235 aa19.18■□□□□ 0.66
KDM4B-206ENST00000588361 GNAI1P63096 354 aa19.18■□□□□ 0.66
KDM4B-206ENST00000588361 LRRC7Q96NW7 1537 aa19.18■□□□□ 0.66
KDM4B-206ENST00000588361 AEBP1Q8IUX7 1158 aa19.17■□□□□ 0.66
KDM4B-206ENST00000588361 PREX1Q8TCU6 1659 aa19.17■□□□□ 0.66
KDM4B-206ENST00000588361 APBB1O00213 710 aa19.17■□□□□ 0.66
KDM4B-206ENST00000588361 PPIP5K1Q6PFW1 1433 aa19.17■□□□□ 0.66
KDM4B-206ENST00000588361 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
KDM4B-206ENST00000588361 METP08581 1390 aa19.16■□□□□ 0.66
KDM4B-206ENST00000588361 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
KDM4B-206ENST00000588361 RICTORQ6R327 1708 aa19.16■□□□□ 0.66
KDM4B-206ENST00000588361 RRP9O43818 475 aaKnown RBP19.15■□□□□ 0.66
KDM4B-206ENST00000588361 FAM135BQ49AJ0 1406 aa19.15■□□□□ 0.66
KDM4B-206ENST00000588361 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
KDM4B-206ENST00000588361 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.65
KDM4B-206ENST00000588361 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
KDM4B-206ENST00000588361 CALD1Q05682 793 aaKnown RBP19.14■□□□□ 0.65
KDM4B-206ENST00000588361 IFT57Q9NWB7 429 aa19.14■□□□□ 0.65
KDM4B-206ENST00000588361 MED14O60244 1454 aa19.13■□□□□ 0.65
KDM4B-206ENST00000588361 MCM10Q7L590 875 aa19.13■□□□□ 0.65
KDM4B-206ENST00000588361 ESPNB1AK53 854 aa19.12■□□□□ 0.65
KDM4B-206ENST00000588361 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
KDM4B-206ENST00000588361 ZMYM3Q14202 1370 aa19.12■□□□□ 0.65
KDM4B-206ENST00000588361 RBM42Q9BTD8 480 aaKnown RBP19.11■□□□□ 0.65
KDM4B-206ENST00000588361 MIS18AQ9NYP9 233 aa19.11■□□□□ 0.65
KDM4B-206ENST00000588361 HSP90AB1P08238 724 aaKnown RBP19.11■□□□□ 0.65
KDM4B-206ENST00000588361 CFAP44Q96MT7 982 aa19.11■□□□□ 0.65
KDM4B-206ENST00000588361 GRPEL1Q9HAV7 217 aa19.11■□□□□ 0.65
KDM4B-206ENST00000588361 A2ML1A8K2U0 1454 aa19.11■□□□□ 0.65
KDM4B-206ENST00000588361 C16orf71Q8IYS4 520 aaPredicted RBP19.09■□□□□ 0.65
KDM4B-206ENST00000588361 TSPOAP1O95153 1857 aa19.09■□□□□ 0.65
KDM4B-206ENST00000588361 ZNF853P0CG23 659 aa19.09■□□□□ 0.65
KDM4B-206ENST00000588361 TBC1D9Q6ZT07 1266 aa19.09■□□□□ 0.65
KDM4B-206ENST00000588361 MRE11P49959 708 aa19.08■□□□□ 0.65
KDM4B-206ENST00000588361 ZNF428Q96B54 188 aa19.08■□□□□ 0.65
KDM4B-206ENST00000588361 GCC1Q96CN9 775 aa19.08■□□□□ 0.65
KDM4B-206ENST00000588361 BMP2KLQ5H9B9 411 aa19.08■□□□□ 0.64
KDM4B-206ENST00000588361 CD2BP2O95400 341 aaKnown RBP19.07■□□□□ 0.64
KDM4B-206ENST00000588361 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
KDM4B-206ENST00000588361 GAS2L3Q86XJ1 694 aa19.07■□□□□ 0.64
KDM4B-206ENST00000588361 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
KDM4B-206ENST00000588361 LMOD3Q0VAK6 560 aa19.06■□□□□ 0.64
KDM4B-206ENST00000588361 EIF4A2Q14240 407 aaKnown RBP19.06■□□□□ 0.64
KDM4B-206ENST00000588361 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
KDM4B-206ENST00000588361 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
KDM4B-206ENST00000588361 MAP2P11137 1827 aaKnown RBP19.06■□□□□ 0.64
KDM4B-206ENST00000588361 EDC4Q6P2E9 1401 aaKnown RBP19.06■□□□□ 0.64
KDM4B-206ENST00000588361 API5Q9BZZ5 524 aaKnown RBP19.06■□□□□ 0.64
KDM4B-206ENST00000588361 SLC26A8Q96RN1 970 aa19.05■□□□□ 0.64
KDM4B-206ENST00000588361 ATP7BP35670 1465 aa19.05■□□□□ 0.64
KDM4B-206ENST00000588361 CHMP4BQ9H444 224 aaKnown RBP19.05■□□□□ 0.64
KDM4B-206ENST00000588361 CPS1P31327 1500 aa19.04■□□□□ 0.64
KDM4B-206ENST00000588361 RBM25P49756 843 aaKnown RBP19.04■□□□□ 0.64
KDM4B-206ENST00000588361 SMARCA5O60264 1052 aaPredicted RBP19.04■□□□□ 0.64
KDM4B-206ENST00000588361 BRPF1P55201 1214 aaPredicted RBP19.04■□□□□ 0.64
KDM4B-206ENST00000588361 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
KDM4B-206ENST00000588361 OTUD7AQ8TE49 926 aaPredicted RBP19.04■□□□□ 0.64
KDM4B-206ENST00000588361 ABCC4O15439 1325 aa19.04■□□□□ 0.64
KDM4B-206ENST00000588361 CPSF1Q10570 1443 aaKnown RBP19.04■□□□□ 0.64
KDM4B-206ENST00000588361 FOXO3O43524 673 aa19.03■□□□□ 0.64
KDM4B-206ENST00000588361 SLC4A10Q6U841 1118 aa19.03■□□□□ 0.64
KDM4B-206ENST00000588361 CLTCQ00610 1675 aaKnown RBP19.02■□□□□ 0.64
KDM4B-206ENST00000588361 ACEP12821 1306 aa19.02■□□□□ 0.64
KDM4B-206ENST00000588361 RBM10P98175 930 aaKnown RBP19.02■□□□□ 0.64
KDM4B-206ENST00000588361 ARID3AQ99856 593 aa19.02■□□□□ 0.64
KDM4B-206ENST00000588361 KIF20BQ96Q89 1820 aa19.02■□□□□ 0.64
KDM4B-206ENST00000588361 ANKRD26Q9UPS8 1709 aa19.02■□□□□ 0.64
KDM4B-206ENST00000588361 KIF2CQ99661 725 aa19.02■□□□□ 0.63
KDM4B-206ENST00000588361 GSPT1P15170 499 aaKnown RBP19.01■□□□□ 0.63
KDM4B-206ENST00000588361 TNPO1Q92973 898 aaKnown RBP19■□□□□ 0.63
KDM4B-206ENST00000588361 NECTIN2Q92692 538 aa19■□□□□ 0.63
KDM4B-206ENST00000588361 ZNF692Q9BU19 519 aaPredicted RBP19■□□□□ 0.63
KDM4B-206ENST00000588361 SLC4A2P04920 1241 aa19■□□□□ 0.63
KDM4B-206ENST00000588361 CEBPAP49715 358 aaPredicted RBP19■□□□□ 0.63
KDM4B-206ENST00000588361 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
KDM4B-206ENST00000588361 F6X3S4 739 aa18.99■□□□□ 0.63
KDM4B-206ENST00000588361 PLEKHM2Q8IWE5 1019 aa18.99■□□□□ 0.63
KDM4B-206ENST00000588361 PTCH1Q13635 1447 aa18.99■□□□□ 0.63
KDM4B-206ENST00000588361 MEIS3Q99687 375 aa18.99■□□□□ 0.63
KDM4B-206ENST00000588361 HDGFP51858 240 aaKnown RBP18.98■□□□□ 0.63
KDM4B-206ENST00000588361 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
KDM4B-206ENST00000588361 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
KDM4B-206ENST00000588361 CDC45O75419 566 aa18.98■□□□□ 0.63
KDM4B-206ENST00000588361 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
KDM4B-206ENST00000588361 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
KDM4B-206ENST00000588361 AATKQ6ZMQ8 1374 aa18.97■□□□□ 0.63
KDM4B-206ENST00000588361 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
KDM4B-206ENST00000588361 SNX21Q969T3 373 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms