RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 LMO7Q8WWI1 1683 aa34.06■■■■□ 3.04
CAPNS1-204ENST00000587718 NLRP6P59044 892 aa34.06■■■■□ 3.04
CAPNS1-204ENST00000587718 DEFB132Q7Z7B7 95 aa34.06■■■■□ 3.04
CAPNS1-204ENST00000587718 ZNF692Q9BU19 519 aaPredicted RBP34.06■■■■□ 3.04
CAPNS1-204ENST00000587718 NPC1L1Q9UHC9 1359 aa34.05■■■■□ 3.04
CAPNS1-204ENST00000587718 ZRANB1Q9UGI0 708 aa34.03■■■■□ 3.04
CAPNS1-204ENST00000587718 CPSF1Q10570 1443 aaKnown RBP34.03■■■■□ 3.04
CAPNS1-204ENST00000587718 EVA1CP58658 441 aa34.02■■■■□ 3.04
CAPNS1-204ENST00000587718 SLIT3O75094 1523 aa34.02■■■■□ 3.04
CAPNS1-204ENST00000587718 PANK3Q9H999 370 aa34.02■■■■□ 3.04
CAPNS1-204ENST00000587718 TTC21BQ7Z4L5 1316 aa34.01■■■■□ 3.03
CAPNS1-204ENST00000587718 SF3B2Q13435 895 aaKnown RBP34.01■■■■□ 3.03
CAPNS1-204ENST00000587718 LARP1Q6PKG0 1096 aaKnown RBP34.01■■■■□ 3.03
CAPNS1-204ENST00000587718 FAM182BQ5T319 152 aa34■■■■□ 3.03
CAPNS1-204ENST00000587718 BARGINQ6ZT62 677 aa34■■■■□ 3.03
CAPNS1-204ENST00000587718 PIK3C2AO00443 1686 aa33.99■■■■□ 3.03
CAPNS1-204ENST00000587718 USP35Q9P2H5 1018 aa33.98■■■■□ 3.03
CAPNS1-204ENST00000587718 AATKQ6ZMQ8 1374 aa33.96■■■■□ 3.03
CAPNS1-204ENST00000587718 COL5A2P05997 1499 aaPredicted RBP33.96■■■■□ 3.03
CAPNS1-204ENST00000587718 AKAP12Q02952 1782 aa33.95■■■■□ 3.03
CAPNS1-204ENST00000587718 TTC21AQ8NDW8 1320 aa33.95■■■■□ 3.03
CAPNS1-204ENST00000587718 NUDCQ9Y266 331 aa33.94■■■■□ 3.02
CAPNS1-204ENST00000587718 TCP11L2Q8N4U5 519 aa33.94■■■■□ 3.02
CAPNS1-204ENST00000587718 MYOM1P52179 1685 aa33.93■■■■□ 3.02
CAPNS1-204ENST00000587718 THRAP3Q9Y2W1 955 aaKnown RBP33.91■■■■□ 3.02
CAPNS1-204ENST00000587718 BAG6P46379 1132 aa33.89■■■■□ 3.02
CAPNS1-204ENST00000587718 CD163L1Q9NR16 1453 aa33.89■■■■□ 3.02
CAPNS1-204ENST00000587718 ARHGEF25Q86VW2 580 aa33.89■■■■□ 3.02
CAPNS1-204ENST00000587718 AXIN2Q9Y2T1 843 aa33.88■■■■□ 3.01
CAPNS1-204ENST00000587718 KNSTRNQ9Y448 316 aa33.88■■■■□ 3.01
CAPNS1-204ENST00000587718 SRCAPQ6ZRS2 3230 aa33.88■■■■□ 3.01
CAPNS1-204ENST00000587718 PDE3BQ13370 1112 aa33.87■■■■□ 3.01
CAPNS1-204ENST00000587718 KCNH5Q8NCM2 988 aa33.87■■■■□ 3.01
CAPNS1-204ENST00000587718 PUS7Q96PZ0 661 aaKnown RBP33.87■■■■□ 3.01
CAPNS1-204ENST00000587718 RNF123Q5XPI4 1314 aa33.87■■■■□ 3.01
CAPNS1-204ENST00000587718 COL18A1P39060 1754 aa33.87■■■■□ 3.01
CAPNS1-204ENST00000587718 ZBTB7CA1YPR0 619 aa33.86■■■■□ 3.01
CAPNS1-204ENST00000587718 FAM196AQ6ZSG2 479 aa33.86■■■■□ 3.01
CAPNS1-204ENST00000587718 CRB1P82279 1406 aa33.86■■■■□ 3.01
CAPNS1-204ENST00000587718 SLC12A5Q9H2X9 1139 aa33.85■■■■□ 3.01
CAPNS1-204ENST00000587718 MON2Q7Z3U7 1717 aa33.84■■■■□ 3.01
CAPNS1-204ENST00000587718 DISP2A7MBM2 1401 aa33.83■■■■□ 3.01
CAPNS1-204ENST00000587718 RGPD1P0DJD0 1748 aa33.82■■■■□ 3.01
CAPNS1-204ENST00000587718 EN1Q05925 392 aaPredicted RBP33.82■■■■□ 3
CAPNS1-204ENST00000587718 PPP4R2Q9NY27 417 aa33.82■■■■□ 3
CAPNS1-204ENST00000587718 USP31Q70CQ4 1352 aa33.82■■■■□ 3
CAPNS1-204ENST00000587718 AMER1Q5JTC6 1135 aaPredicted RBP33.81■■■■□ 3
CAPNS1-204ENST00000587718 NFAT5O94916 1531 aa33.8■■■■□ 3
CAPNS1-204ENST00000587718 TRIM37O94972 964 aa33.79■■■■□ 3
CAPNS1-204ENST00000587718 CNGB1Q14028 1251 aaPredicted RBP33.79■■■■□ 3
CAPNS1-204ENST00000587718 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.79■■■■□ 3
CAPNS1-204ENST00000587718 WDR17Q8IZU2 1322 aa33.78■■■■□ 3
CAPNS1-204ENST00000587718 TNS1Q9HBL0 1735 aaKnown RBP33.78■■■■□ 3
CAPNS1-204ENST00000587718 SOX12O15370 315 aa33.77■■■■□ 3
CAPNS1-204ENST00000587718 CC2D1BQ5T0F9 858 aaKnown RBP33.77■■■■□ 3
CAPNS1-204ENST00000587718 HDGFL2Q7Z4V5 671 aaPredicted RBP33.77■■■■□ 3
CAPNS1-204ENST00000587718 NME9Q86XW9 330 aa33.77■■■■□ 3
CAPNS1-204ENST00000587718 TOM1L2Q6ZVM7 507 aa33.76■■■□□ 2.99
CAPNS1-204ENST00000587718 PARP4Q9UKK3 1724 aaKnown RBP33.75■■■□□ 2.99
CAPNS1-204ENST00000587718 TSHZ2Q9NRE2 1034 aa33.75■■■□□ 2.99
CAPNS1-204ENST00000587718 A0A1W2PP64 1363 aa33.73■■■□□ 2.99
CAPNS1-204ENST00000587718 TERF2IPQ9NYB0 399 aa33.73■■■□□ 2.99
CAPNS1-204ENST00000587718 EDC4Q6P2E9 1401 aaKnown RBP33.73■■■□□ 2.99
CAPNS1-204ENST00000587718 USP54Q70EL1 1684 aa33.72■■■□□ 2.99
CAPNS1-204ENST00000587718 CAMKK2Q96RR4 588 aa33.72■■■□□ 2.99
CAPNS1-204ENST00000587718 EZH2Q15910 746 aaKnown RBP33.71■■■□□ 2.99
CAPNS1-204ENST00000587718 CARD10Q9BWT7 1032 aa33.69■■■□□ 2.98
CAPNS1-204ENST00000587718 ABCC6O95255 1503 aa33.69■■■□□ 2.98
CAPNS1-204ENST00000587718 PPP2R1AP30153 589 aa33.68■■■□□ 2.98
CAPNS1-204ENST00000587718 APBA3O96018 575 aa33.68■■■□□ 2.98
CAPNS1-204ENST00000587718 NINLQ9Y2I6 1382 aa33.67■■■□□ 2.98
CAPNS1-204ENST00000587718 RGPD5Q99666 1765 aa33.67■■■□□ 2.98
CAPNS1-204ENST00000587718 DDB1Q16531 1140 aa33.66■■■□□ 2.98
CAPNS1-204ENST00000587718 PSDA5PKW4 1024 aaPredicted RBP33.64■■■□□ 2.98
CAPNS1-204ENST00000587718 CDCA7Q9BWT1 371 aaPredicted RBP33.64■■■□□ 2.98
CAPNS1-204ENST00000587718 LRRC37A3O60309 1634 aa33.64■■■□□ 2.98
CAPNS1-204ENST00000587718 PEAK1Q9H792 1746 aa33.63■■■□□ 2.97
CAPNS1-204ENST00000587718 OVOS2A0A0J9YW53 1432 aa33.63■■■□□ 2.97
CAPNS1-204ENST00000587718 OVOS2Q6IE36 1432 aa33.63■■■□□ 2.97
CAPNS1-204ENST00000587718 CSB-PGBD3P0DP91 1061 aa33.63■■■□□ 2.97
CAPNS1-204ENST00000587718 OVOS2A0A0G2JMS6 1433 aa33.62■■■□□ 2.97
CAPNS1-204ENST00000587718 ERBB3P21860 1342 aa33.59■■■□□ 2.97
CAPNS1-204ENST00000587718 MARCH10Q8NA82 808 aaPredicted RBP33.58■■■□□ 2.97
CAPNS1-204ENST00000587718 WNK3Q9BYP7 1800 aa33.58■■■□□ 2.97
CAPNS1-204ENST00000587718 R3HDM1Q15032 1099 aaKnown RBP33.55■■■□□ 2.96
CAPNS1-204ENST00000587718 BCL9O00512 1426 aa33.55■■■□□ 2.96
CAPNS1-204ENST00000587718 ANKRD36BQ8N2N9 1353 aa33.55■■■□□ 2.96
CAPNS1-204ENST00000587718 IRX6P78412 446 aaPredicted RBP33.54■■■□□ 2.96
CAPNS1-204ENST00000587718 NGEFQ8N5V2 710 aa33.54■■■□□ 2.96
CAPNS1-204ENST00000587718 LTN1O94822 1766 aa33.52■■■□□ 2.96
CAPNS1-204ENST00000587718 WDR43Q15061 677 aaKnown RBP eCLIP33.52■■■□□ 2.96
CAPNS1-204ENST00000587718 LRP5O75197 1615 aa33.51■■■□□ 2.96
CAPNS1-204ENST00000587718 RREB1Q92766 1687 aa33.51■■■□□ 2.95
CAPNS1-204ENST00000587718 EXOC5O00471 708 aa33.51■■■□□ 2.95
CAPNS1-204ENST00000587718 PTF1AQ7RTS3 328 aa33.5■■■□□ 2.95
CAPNS1-204ENST00000587718 ANKRD24Q8TF21 1146 aa33.5■■■□□ 2.95
CAPNS1-204ENST00000587718 IP6K1Q92551 441 aa33.49■■■□□ 2.95
CAPNS1-204ENST00000587718 BCL11BQ9C0K0 894 aaPredicted RBP33.49■■■□□ 2.95
CAPNS1-204ENST00000587718 NLRP2Q9NX02 1062 aa33.49■■■□□ 2.95
CAPNS1-204ENST00000587718 COG3Q96JB2 828 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms