RNA–Protein interactions for RNA: ENST00000586817.5

POLR2E-205, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 2,441 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-205ENST00000586817 MBIPQ9NS73 344 aa28.48■■■□□ 2.15
POLR2E-205ENST00000586817 FAM83GA6ND36 823 aa28.47■■■□□ 2.15
POLR2E-205ENST00000586817 ZNF692Q9BU19 519 aaPredicted RBP28.47■■■□□ 2.15
POLR2E-205ENST00000586817 SIRT2Q8IXJ6 389 aa28.45■■■□□ 2.15
POLR2E-205ENST00000586817 RRS1Q15050 365 aaKnown RBP28.45■■■□□ 2.14
POLR2E-205ENST00000586817 FAM43AQ8N2R8 423 aa28.45■■■□□ 2.14
POLR2E-205ENST00000586817 TRAK2O60296 914 aa28.44■■■□□ 2.14
POLR2E-205ENST00000586817 XRCC6P12956 609 aaKnown RBP eCLIP28.44■■■□□ 2.14
POLR2E-205ENST00000586817 DCTN1Q14203 1278 aa28.44■■■□□ 2.14
POLR2E-205ENST00000586817 FOXD4L1Q9NU39 408 aa28.44■■■□□ 2.14
POLR2E-205ENST00000586817 RBM25P49756 843 aaKnown RBP28.44■■■□□ 2.14
POLR2E-205ENST00000586817 PANK2Q9BZ23 570 aa28.44■■■□□ 2.14
POLR2E-205ENST00000586817 IL13P35225 146 aa28.43■■■□□ 2.14
POLR2E-205ENST00000586817 L1TD1Q5T7N2 865 aaKnown RBP28.43■■■□□ 2.14
POLR2E-205ENST00000586817 C8orf58Q8NAV2 365 aa28.43■■■□□ 2.14
POLR2E-205ENST00000586817 MAP2P11137 1827 aaKnown RBP28.43■■■□□ 2.14
POLR2E-205ENST00000586817 CDC42BPGQ6DT37 1551 aa28.42■■■□□ 2.14
POLR2E-205ENST00000586817 GOLGA6L3A6NEY3 463 aa28.41■■■□□ 2.14
POLR2E-205ENST00000586817 CD2BP2O95400 341 aaKnown RBP28.41■■■□□ 2.14
POLR2E-205ENST00000586817 CEBPAP49715 358 aaPredicted RBP28.41■■■□□ 2.14
POLR2E-205ENST00000586817 TWISTNBQ3B726 338 aaPredicted RBP28.41■■■□□ 2.14
POLR2E-205ENST00000586817 BMP2KLQ5H9B9 411 aa28.4■■■□□ 2.14
POLR2E-205ENST00000586817 RRAGDQ9NQL2 400 aaPredicted RBP28.4■■■□□ 2.14
POLR2E-205ENST00000586817 BRPF1P55201 1214 aaPredicted RBP28.4■■■□□ 2.14
POLR2E-205ENST00000586817 GNAI1P63096 354 aa28.4■■■□□ 2.14
POLR2E-205ENST00000586817 AEBP2Q6ZN18 517 aaPredicted RBP28.4■■■□□ 2.14
POLR2E-205ENST00000586817 KIF2CQ99661 725 aa28.4■■■□□ 2.14
POLR2E-205ENST00000586817 RBM42Q9BTD8 480 aaKnown RBP28.4■■■□□ 2.14
POLR2E-205ENST00000586817 IFT57Q9NWB7 429 aa28.39■■■□□ 2.13
POLR2E-205ENST00000586817 TBC1D9Q6ZT07 1266 aa28.38■■■□□ 2.13
POLR2E-205ENST00000586817 ZNF853P0CG23 659 aa28.37■■■□□ 2.13
POLR2E-205ENST00000586817 TXNDC2Q86VQ3 553 aa28.37■■■□□ 2.13
POLR2E-205ENST00000586817 FSD2A1L4K1 749 aa28.37■■■□□ 2.13
POLR2E-205ENST00000586817 HSP90AB1P08238 724 aaKnown RBP28.37■■■□□ 2.13
POLR2E-205ENST00000586817 DDIT3P35638 169 aa28.37■■■□□ 2.13
POLR2E-205ENST00000586817 GCC1Q96CN9 775 aa28.37■■■□□ 2.13
POLR2E-205ENST00000586817 PTCH1Q13635 1447 aa28.36■■■□□ 2.13
POLR2E-205ENST00000586817 ZNF428Q96B54 188 aa28.36■■■□□ 2.13
POLR2E-205ENST00000586817 ATP7BP35670 1465 aa28.35■■■□□ 2.13
POLR2E-205ENST00000586817 ARHGAP45Q92619 1136 aa28.35■■■□□ 2.13
POLR2E-205ENST00000586817 ABCC4O15439 1325 aa28.35■■■□□ 2.13
POLR2E-205ENST00000586817 NCOA3Q9Y6Q9 1424 aa28.34■■■□□ 2.13
POLR2E-205ENST00000586817 TNPO1Q92973 898 aaKnown RBP28.34■■■□□ 2.13
POLR2E-205ENST00000586817 SNX21Q969T3 373 aa28.34■■■□□ 2.13
POLR2E-205ENST00000586817 WASLO00401 505 aaPredicted RBP28.33■■■□□ 2.13
POLR2E-205ENST00000586817 EIF5BO60841 1220 aaKnown RBP28.33■■■□□ 2.13
POLR2E-205ENST00000586817 KRT24Q2M2I5 525 aa28.33■■■□□ 2.13
POLR2E-205ENST00000586817 PIK3R4Q99570 1358 aa28.33■■■□□ 2.13
POLR2E-205ENST00000586817 CALD1Q05682 793 aaKnown RBP28.33■■■□□ 2.13
POLR2E-205ENST00000586817 RIMS2Q9UQ26 1411 aa28.32■■■□□ 2.12
POLR2E-205ENST00000586817 CFAP44Q96MT7 982 aa28.32■■■□□ 2.12
POLR2E-205ENST00000586817 A2ML1A8K2U0 1454 aa28.31■■■□□ 2.12
POLR2E-205ENST00000586817 NUDT16Q96DE0 195 aaKnown RBP28.3■■■□□ 2.12
POLR2E-205ENST00000586817 CPSF1Q10570 1443 aaKnown RBP28.3■■■□□ 2.12
POLR2E-205ENST00000586817 AEBP1Q8IUX7 1158 aa28.3■■■□□ 2.12
POLR2E-205ENST00000586817 COG3Q96JB2 828 aa28.3■■■□□ 2.12
POLR2E-205ENST00000586817 METP08581 1390 aa28.3■■■□□ 2.12
POLR2E-205ENST00000586817 CPS1P31327 1500 aa28.29■■■□□ 2.12
POLR2E-205ENST00000586817 EDC4Q6P2E9 1401 aaKnown RBP28.29■■■□□ 2.12
POLR2E-205ENST00000586817 HSP90AA1P07900 732 aaKnown RBP28.29■■■□□ 2.12
POLR2E-205ENST00000586817 GSPT1P15170 499 aaKnown RBP28.29■■■□□ 2.12
POLR2E-205ENST00000586817 C16orf71Q8IYS4 520 aaPredicted RBP28.29■■■□□ 2.12
POLR2E-205ENST00000586817 ADAMTSL3P82987 1691 aa28.28■■■□□ 2.12
POLR2E-205ENST00000586817 DDX11L8A8MPP1 907 aa28.27■■■□□ 2.12
POLR2E-205ENST00000586817 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
POLR2E-205ENST00000586817 DLG5Q8TDM6 1919 aa28.26■■■□□ 2.12
POLR2E-205ENST00000586817 CDK12Q9NYV4 1490 aaPredicted RBP28.26■■■□□ 2.11
POLR2E-205ENST00000586817 CHMP4BQ9H444 224 aaKnown RBP28.26■■■□□ 2.11
POLR2E-205ENST00000586817 REREQ9P2R6 1566 aa28.25■■■□□ 2.11
POLR2E-205ENST00000586817 DLC1Q96QB1 1528 aa28.25■■■□□ 2.11
POLR2E-205ENST00000586817 RIMS1Q86UR5 1692 aaKnown RBP28.25■■■□□ 2.11
POLR2E-205ENST00000586817 AGLP35573 1532 aa28.24■■■□□ 2.11
POLR2E-205ENST00000586817 APBB1O00213 710 aa28.24■■■□□ 2.11
POLR2E-205ENST00000586817 API5Q9BZZ5 524 aaKnown RBP28.24■■■□□ 2.11
POLR2E-205ENST00000586817 NUTM2FA1L443 756 aa28.23■■■□□ 2.11
POLR2E-205ENST00000586817 PLEKHM2Q8IWE5 1019 aa28.23■■■□□ 2.11
POLR2E-205ENST00000586817 OTUD7AQ8TE49 926 aaPredicted RBP28.23■■■□□ 2.11
POLR2E-205ENST00000586817 KNDC1Q76NI1 1749 aa28.23■■■□□ 2.11
POLR2E-205ENST00000586817 GAS2L2Q8NHY3 880 aa28.23■■■□□ 2.11
POLR2E-205ENST00000586817 SETD1AO15047 1707 aaKnown RBP28.23■■■□□ 2.11
POLR2E-205ENST00000586817 RAB3GAP1Q15042 981 aa28.22■■■□□ 2.11
POLR2E-205ENST00000586817 MCM10Q7L590 875 aa28.22■■■□□ 2.11
POLR2E-205ENST00000586817 K7ELQ4 463 aaPredicted RBP28.22■■■□□ 2.11
POLR2E-205ENST00000586817 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
POLR2E-205ENST00000586817 SULT6B1Q6IMI4 303 aa28.21■■■□□ 2.11
POLR2E-205ENST00000586817 CDC45O75419 566 aa28.21■■■□□ 2.11
POLR2E-205ENST00000586817 CCDC61Q9Y6R9 512 aa28.2■■■□□ 2.11
POLR2E-205ENST00000586817 AATKQ6ZMQ8 1374 aa28.2■■■□□ 2.1
POLR2E-205ENST00000586817 SOX12O15370 315 aa28.2■■■□□ 2.1
POLR2E-205ENST00000586817 GRPEL1Q9HAV7 217 aa28.19■■■□□ 2.1
POLR2E-205ENST00000586817 SMARCA5O60264 1052 aaPredicted RBP28.19■■■□□ 2.1
POLR2E-205ENST00000586817 SSFA2P28290 1259 aa28.19■■■□□ 2.1
POLR2E-205ENST00000586817 GAS2L3Q86XJ1 694 aa28.19■■■□□ 2.1
POLR2E-205ENST00000586817 PRR36Q9H6K5 1346 aa28.19■■■□□ 2.1
POLR2E-205ENST00000586817 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
POLR2E-205ENST00000586817 EIF4A2Q14240 407 aaKnown RBP28.18■■■□□ 2.1
POLR2E-205ENST00000586817 MRE11P49959 708 aa28.18■■■□□ 2.1
POLR2E-205ENST00000586817 DCTPP1Q9H773 170 aa28.18■■■□□ 2.1
POLR2E-205ENST00000586817 PKNOX2Q96KN3 472 aa28.17■■■□□ 2.1
POLR2E-205ENST00000586817 GBP4Q96PP9 640 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms