RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
NUP85-224ENST00000583948 GCP02774 474 aa16.9■□□□□ 0.3
NUP85-224ENST00000583948 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
NUP85-224ENST00000583948 CRB1P82279 1406 aa16.89■□□□□ 0.29
NUP85-224ENST00000583948 MTFR1LQ9H019 292 aa16.89■□□□□ 0.29
NUP85-224ENST00000583948 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
NUP85-224ENST00000583948 USP19O94966 1318 aa16.89■□□□□ 0.29
NUP85-224ENST00000583948 CPDO75976 1380 aa16.89■□□□□ 0.29
NUP85-224ENST00000583948 ACSBG1Q96GR2 724 aa16.88■□□□□ 0.29
NUP85-224ENST00000583948 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
NUP85-224ENST00000583948 ZNF827Q17R98 1081 aa16.87■□□□□ 0.29
NUP85-224ENST00000583948 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
NUP85-224ENST00000583948 NLGN2Q8NFZ4 835 aa16.87■□□□□ 0.29
NUP85-224ENST00000583948 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
NUP85-224ENST00000583948 AKAP12Q02952 1782 aa16.87■□□□□ 0.29
NUP85-224ENST00000583948 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
NUP85-224ENST00000583948 TOPAZ1Q8N9V7 1692 aa16.86■□□□□ 0.29
NUP85-224ENST00000583948 RGPD5Q99666 1765 aa16.86■□□□□ 0.29
NUP85-224ENST00000583948 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
NUP85-224ENST00000583948 SOX12O15370 315 aa16.83■□□□□ 0.28
NUP85-224ENST00000583948 COL18A1P39060 1754 aa16.83■□□□□ 0.28
NUP85-224ENST00000583948 DCAF11Q8TEB1 546 aa16.83■□□□□ 0.28
NUP85-224ENST00000583948 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
NUP85-224ENST00000583948 KCNQ4P56696 695 aa16.82■□□□□ 0.28
NUP85-224ENST00000583948 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
NUP85-224ENST00000583948 LRRC4BQ9NT99 713 aa16.81■□□□□ 0.28
NUP85-224ENST00000583948 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
NUP85-224ENST00000583948 ZNF526Q8TF50 670 aaPredicted RBP16.8■□□□□ 0.28
NUP85-224ENST00000583948 PAPPAQ13219 1627 aa16.8■□□□□ 0.28
NUP85-224ENST00000583948 NLRP6P59044 892 aa16.79■□□□□ 0.28
NUP85-224ENST00000583948 CABP2Q9NPB3 220 aa16.79■□□□□ 0.28
NUP85-224ENST00000583948 CCDC61Q9Y6R9 512 aa16.79■□□□□ 0.28
NUP85-224ENST00000583948 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.28
NUP85-224ENST00000583948 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.28
NUP85-224ENST00000583948 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
NUP85-224ENST00000583948 MAP3K5Q99683 1374 aa16.77■□□□□ 0.27
NUP85-224ENST00000583948 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
NUP85-224ENST00000583948 PPIP5K1Q6PFW1 1433 aa16.76■□□□□ 0.27
NUP85-224ENST00000583948 BTAF1O14981 1849 aa16.75■□□□□ 0.27
NUP85-224ENST00000583948 EXOC5O00471 708 aa16.75■□□□□ 0.27
NUP85-224ENST00000583948 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
NUP85-224ENST00000583948 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
NUP85-224ENST00000583948 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
NUP85-224ENST00000583948 TUBGCP6Q96RT7 1819 aa16.75■□□□□ 0.27
NUP85-224ENST00000583948 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
NUP85-224ENST00000583948 SLIT3O75094 1523 aa16.74■□□□□ 0.27
NUP85-224ENST00000583948 BCL9O00512 1426 aa16.73■□□□□ 0.27
NUP85-224ENST00000583948 PIK3C2AO00443 1686 aa16.73■□□□□ 0.27
NUP85-224ENST00000583948 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
NUP85-224ENST00000583948 PNPLA7Q6ZV29 1317 aa16.72■□□□□ 0.27
NUP85-224ENST00000583948 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
NUP85-224ENST00000583948 CABP1Q9NZU7 370 aa16.72■□□□□ 0.27
NUP85-224ENST00000583948 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
NUP85-224ENST00000583948 CARD10Q9BWT7 1032 aa16.71■□□□□ 0.27
NUP85-224ENST00000583948 HSPA6P17066 643 aa16.7■□□□□ 0.26
NUP85-224ENST00000583948 USP6P35125 1406 aa16.7■□□□□ 0.26
NUP85-224ENST00000583948 CPSF1Q10570 1443 aaKnown RBP16.7■□□□□ 0.26
NUP85-224ENST00000583948 MSL1Q68DK7 614 aa16.69■□□□□ 0.26
NUP85-224ENST00000583948 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
NUP85-224ENST00000583948 CAPN15O75808 1086 aa16.68■□□□□ 0.26
NUP85-224ENST00000583948 TNS2Q63HR2 1409 aa16.68■□□□□ 0.26
NUP85-224ENST00000583948 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
NUP85-224ENST00000583948 POLD1P28340 1107 aa16.67■□□□□ 0.26
NUP85-224ENST00000583948 GPBP1L1Q9HC44 474 aaPredicted RBP16.67■□□□□ 0.26
NUP85-224ENST00000583948 CDCA7Q9BWT1 371 aaPredicted RBP16.66■□□□□ 0.26
NUP85-224ENST00000583948 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.26
NUP85-224ENST00000583948 MSH5O43196 834 aa16.64■□□□□ 0.25
NUP85-224ENST00000583948 TFCP2L1Q9NZI6 479 aa16.64■□□□□ 0.25
NUP85-224ENST00000583948 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
NUP85-224ENST00000583948 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
NUP85-224ENST00000583948 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
NUP85-224ENST00000583948 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
NUP85-224ENST00000583948 COL23A1Q86Y22 540 aaPredicted RBP16.61■□□□□ 0.25
NUP85-224ENST00000583948 NFAT5O94916 1531 aa16.6■□□□□ 0.25
NUP85-224ENST00000583948 ABCC6O95255 1503 aa16.6■□□□□ 0.25
NUP85-224ENST00000583948 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
NUP85-224ENST00000583948 HTRA3P83110 453 aa16.6■□□□□ 0.25
NUP85-224ENST00000583948 DDX54Q8TDD1 881 aaKnown RBP16.6■□□□□ 0.25
NUP85-224ENST00000583948 SLC16A10Q8TF71 515 aa16.6■□□□□ 0.25
NUP85-224ENST00000583948 TTC21BQ7Z4L5 1316 aa16.6■□□□□ 0.25
NUP85-224ENST00000583948 KIF3CO14782 793 aa16.59■□□□□ 0.25
NUP85-224ENST00000583948 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
NUP85-224ENST00000583948 SYTL4Q96C24 671 aaPredicted RBP16.59■□□□□ 0.25
NUP85-224ENST00000583948 ADCY9O60503 1353 aa16.59■□□□□ 0.25
NUP85-224ENST00000583948 CCDC7Q96M83 1385 aa16.59■□□□□ 0.25
NUP85-224ENST00000583948 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
NUP85-224ENST00000583948 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.24
NUP85-224ENST00000583948 CENPJQ9HC77 1338 aaPredicted RBP16.57■□□□□ 0.24
NUP85-224ENST00000583948 IL2RBP14784 551 aa16.57■□□□□ 0.24
NUP85-224ENST00000583948 PRIM1P49642 420 aaKnown RBP16.57■□□□□ 0.24
NUP85-224ENST00000583948 DNAJC5GQ8N7S2 189 aa16.57■□□□□ 0.24
NUP85-224ENST00000583948 ERBB3P21860 1342 aa16.54■□□□□ 0.24
NUP85-224ENST00000583948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
NUP85-224ENST00000583948 KCNH5Q8NCM2 988 aa16.54■□□□□ 0.24
NUP85-224ENST00000583948 ANKRD24Q8TF21 1146 aa16.54■□□□□ 0.24
NUP85-224ENST00000583948 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
NUP85-224ENST00000583948 NSD2O96028 1365 aa16.53■□□□□ 0.24
NUP85-224ENST00000583948 PCNTO95613 3336 aa16.53■□□□□ 0.24
NUP85-224ENST00000583948 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
NUP85-224ENST00000583948 AMIGO3Q86WK7 504 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms