RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 SHANK3Q9BYB0 1731 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 SEC24BO95487 1268 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 SAFB2Q14151 953 aaKnown RBP eCLIP6.4□□□□□ -1.38
CTC1-209ENST00000581729 NBPF8Q3BBV2 869 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 NBPF14Q5TI25 921 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 PROM2Q8N271 834 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 SLAIN1Q8ND83 568 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 MS4A3Q96HJ5 214 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 SGIP1Q9BQI5 828 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 SYT17Q9BSW7 474 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 STRN4Q9NRL3 753 aa6.4□□□□□ -1.38
CTC1-209ENST00000581729 PRR36Q9H6K5 1346 aa6.4□□□□□ -1.39
CTC1-209ENST00000581729 KIAA0232Q92628 1395 aa6.4□□□□□ -1.39
CTC1-209ENST00000581729 PSME1Q06323 249 aa6.39□□□□□ -1.39
CTC1-209ENST00000581729 PCNTO95613 3336 aa6.39□□□□□ -1.39
CTC1-209ENST00000581729 YTHDC2Q9H6S0 1430 aaKnown RBP6.39□□□□□ -1.39
CTC1-209ENST00000581729 PEAK1Q9H792 1746 aa6.39□□□□□ -1.39
CTC1-209ENST00000581729 GIGYF1O75420 1035 aaPredicted RBP6.38□□□□□ -1.39
CTC1-209ENST00000581729 LARP1Q6PKG0 1096 aaKnown RBP6.38□□□□□ -1.39
CTC1-209ENST00000581729 TMEM121BQ9BXQ6 578 aaPredicted RBP6.38□□□□□ -1.39
CTC1-209ENST00000581729 PRDM11Q9NQV5 511 aa6.38□□□□□ -1.39
CTC1-209ENST00000581729 PIK3C2GO75747 1445 aa6.38□□□□□ -1.39
CTC1-209ENST00000581729 SSH2Q76I76 1423 aa6.38□□□□□ -1.39
CTC1-209ENST00000581729 PHRF1Q9P1Y6 1649 aaKnown RBP6.37□□□□□ -1.39
CTC1-209ENST00000581729 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
CTC1-209ENST00000581729 ACIN1Q9UKV3 1341 aaKnown RBP6.37□□□□□ -1.39
CTC1-209ENST00000581729 ATN1P54259 1190 aaPredicted RBP6.37□□□□□ -1.39
CTC1-209ENST00000581729 ZC3H6P61129 1189 aaKnown RBP6.37□□□□□ -1.39
CTC1-209ENST00000581729 SPATA31E1Q6ZUB1 1445 aa6.36□□□□□ -1.39
CTC1-209ENST00000581729 PDE3BQ13370 1112 aa6.36□□□□□ -1.39
CTC1-209ENST00000581729 MKRN4PQ13434 485 aaPredicted RBP6.36□□□□□ -1.39
CTC1-209ENST00000581729 NUTM2GQ5VZR2 741 aa6.36□□□□□ -1.39
CTC1-209ENST00000581729 BARGINQ6ZT62 677 aa6.36□□□□□ -1.39
CTC1-209ENST00000581729 PRAM1Q96QH2 718 aa6.36□□□□□ -1.39
CTC1-209ENST00000581729 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
CTC1-209ENST00000581729 DLC1Q96QB1 1528 aa6.35□□□□□ -1.39
CTC1-209ENST00000581729 CHD4Q14839 1912 aa6.35□□□□□ -1.39
CTC1-209ENST00000581729 RGL3Q3MIN7 710 aa6.35□□□□□ -1.39
CTC1-209ENST00000581729 LMO7Q8WWI1 1683 aa6.35□□□□□ -1.39
CTC1-209ENST00000581729 LRRC37A3O60309 1634 aa6.35□□□□□ -1.39
CTC1-209ENST00000581729 ANKARQ7Z5J8 1434 aa6.34□□□□□ -1.39
CTC1-209ENST00000581729 RGPD3A6NKT7 1758 aaPredicted RBP6.34□□□□□ -1.39
CTC1-209ENST00000581729 RGPD4Q7Z3J3 1758 aa6.34□□□□□ -1.39
CTC1-209ENST00000581729 PARP4Q9UKK3 1724 aaKnown RBP6.34□□□□□ -1.39
CTC1-209ENST00000581729 CFAP70Q5T0N1 1121 aa6.34□□□□□ -1.39
CTC1-209ENST00000581729 TCP11L2Q8N4U5 519 aa6.34□□□□□ -1.39
CTC1-209ENST00000581729 BCL11BQ9C0K0 894 aaPredicted RBP6.34□□□□□ -1.39
CTC1-209ENST00000581729 CREBZFQ9NS37 354 aa6.34□□□□□ -1.39
CTC1-209ENST00000581729 ATP7BP35670 1465 aa6.34□□□□□ -1.4
CTC1-209ENST00000581729 OVOS2A0A0G2JMS6 1433 aa6.33□□□□□ -1.4
CTC1-209ENST00000581729 OVOS2A0A0J9YW53 1432 aa6.33□□□□□ -1.4
CTC1-209ENST00000581729 OVOS2Q6IE36 1432 aa6.33□□□□□ -1.4
CTC1-209ENST00000581729 PLSCR1O15162 318 aa6.33□□□□□ -1.4
CTC1-209ENST00000581729 SLC15A2Q16348 729 aa6.33□□□□□ -1.4
CTC1-209ENST00000581729 NLGN2Q8NFZ4 835 aa6.33□□□□□ -1.4
CTC1-209ENST00000581729 SBF2Q86WG5 1849 aa6.33□□□□□ -1.4
CTC1-209ENST00000581729 COL5A2P05997 1499 aaPredicted RBP6.33□□□□□ -1.4
CTC1-209ENST00000581729 PAPPAQ13219 1627 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 GPRASP1Q5JY77 1395 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 MAP3K5Q99683 1374 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 TULP4Q9NRJ4 1543 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 SNPHO15079 494 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 YBX3P16989 372 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTC1-209ENST00000581729 TXNRD1Q16881 649 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 ZNF827Q17R98 1081 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 PPARGC1BQ86YN6 1023 aaKnown RBP6.32□□□□□ -1.4
CTC1-209ENST00000581729 MARCH10Q8NA82 808 aaPredicted RBP6.32□□□□□ -1.4
CTC1-209ENST00000581729 SIRT1Q96EB6 747 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 ARXQ96QS3 562 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 MTFR1LQ9H019 292 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 ATP10DQ9P241 1426 aa6.32□□□□□ -1.4
CTC1-209ENST00000581729 DHX57Q6P158 1386 aaKnown RBP6.31□□□□□ -1.4
CTC1-209ENST00000581729 MINK1Q8N4C8 1332 aaPredicted RBP6.31□□□□□ -1.4
CTC1-209ENST00000581729 GPR162Q16538 588 aa6.31□□□□□ -1.4
CTC1-209ENST00000581729 MARVELD3Q96A59 401 aa6.31□□□□□ -1.4
CTC1-209ENST00000581729 C14orf93Q9H972 538 aaKnown RBP6.31□□□□□ -1.4
CTC1-209ENST00000581729 ADGRB1O14514 1584 aa6.31□□□□□ -1.4
CTC1-209ENST00000581729 ANKRD30BQ9BXX2 1392 aa6.31□□□□□ -1.4
CTC1-209ENST00000581729 POTEFA5A3E0 1075 aa6.3□□□□□ -1.4
CTC1-209ENST00000581729 HSPA6P17066 643 aa6.3□□□□□ -1.4
CTC1-209ENST00000581729 EVA1CP58658 441 aa6.3□□□□□ -1.4
CTC1-209ENST00000581729 KLHL34Q8N239 644 aa6.3□□□□□ -1.4
CTC1-209ENST00000581729 NGDNQ8NEJ9 315 aaKnown RBP6.3□□□□□ -1.4
CTC1-209ENST00000581729 STK32BQ9NY57 414 aa6.3□□□□□ -1.4
CTC1-209ENST00000581729 USP19O94966 1318 aa6.29□□□□□ -1.4
CTC1-209ENST00000581729 ATXN8OSP0DMR3 200 aa6.29□□□□□ -1.4
CTC1-209ENST00000581729 COL13A1Q5TAT6 717 aaPredicted RBP6.29□□□□□ -1.4
CTC1-209ENST00000581729 ZNF526Q8TF50 670 aaPredicted RBP6.29□□□□□ -1.4
CTC1-209ENST00000581729 SLC4A1APQ9BWU0 796 aaKnown RBP6.29□□□□□ -1.4
CTC1-209ENST00000581729 TRAK1Q9UPV9 953 aa6.29□□□□□ -1.4
CTC1-209ENST00000581729 ADCY9O60503 1353 aa6.29□□□□□ -1.4
CTC1-209ENST00000581729 CPDO75976 1380 aa6.29□□□□□ -1.4
CTC1-209ENST00000581729 CRB1P82279 1406 aa6.28□□□□□ -1.4
CTC1-209ENST00000581729 WASLO00401 505 aaPredicted RBP6.28□□□□□ -1.4
CTC1-209ENST00000581729 DDB1Q16531 1140 aa6.28□□□□□ -1.4
CTC1-209ENST00000581729 LRRC4BQ9NT99 713 aa6.28□□□□□ -1.4
CTC1-209ENST00000581729 POGKQ9P215 609 aa6.28□□□□□ -1.4
CTC1-209ENST00000581729 AATKQ6ZMQ8 1374 aa6.28□□□□□ -1.4
CTC1-209ENST00000581729 WNK3Q9BYP7 1800 aa6.27□□□□□ -1.41
CTC1-209ENST00000581729 BCL9O00512 1426 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms