RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 CYP4X1Q8N118 509 aa4.41□□□□□ -1.7
PTP4A1-204ENST00000578299 SNIP1Q8TAD8 396 aaKnown RBP4.41□□□□□ -1.7
PTP4A1-204ENST00000578299 KCTD15Q96SI1 283 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1-204ENST00000578299 SERPINA10Q9UK55 444 aa4.41□□□□□ -1.7
PTP4A1-204ENST00000578299 TLL2Q9Y6L7 1015 aa4.41□□□□□ -1.7
PTP4A1-204ENST00000578299 TTC24A2A3L6 582 aaPredicted RBP4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 ESPNB1AK53 854 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 TNFRSF10AO00220 468 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 GIGYF1O75420 1035 aaPredicted RBP4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 ADH1CP00326 375 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 ALDH1A1P00352 501 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 NR5A1Q13285 461 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 SLFNL1Q499Z3 407 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 TRIM67Q6ZTA4 783 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 NFATC2IPQ8NCF5 419 aa4.4□□□□□ -1.71
PTP4A1-204ENST00000578299 FSHRP23945 695 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 GRM5P41594 1212 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 DHX9Q08211 1270 aaKnown RBP4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 RNF135Q8IUD6 432 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 TRIM52Q96A61 297 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 CCDC97Q96F63 343 aaPredicted RBP4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 C1orf115Q9H7X2 142 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 TOR4AQ9NXH8 423 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 PDZRN3Q9UPQ7 1066 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 WASF2Q9Y6W5 498 aa4.39□□□□□ -1.71
PTP4A1-204ENST00000578299 MAP7D1Q3KQU3 841 aa4.38□□□□□ -1.71
PTP4A1-204ENST00000578299 INTS6LQ5JSJ4 861 aaKnown RBP4.38□□□□□ -1.71
PTP4A1-204ENST00000578299 PHTF2Q8N3S3 785 aa4.38□□□□□ -1.71
PTP4A1-204ENST00000578299 CCDC82Q8N4S0 544 aa4.38□□□□□ -1.71
PTP4A1-204ENST00000578299 UCN2Q96RP3 112 aa4.38□□□□□ -1.71
PTP4A1-204ENST00000578299 J3QL48 77 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 PIK3CDO00329 1044 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 ATP9BO43861 1147 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 LZTS3O60299 673 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 SKIP12755 728 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 RAB15P59190 212 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 CCDC116Q8IYX3 515 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 PLPP7Q8NBV4 271 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 PPP1R12CQ9BZL4 782 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 TFIP11Q9UBB9 837 aaKnown RBP4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 CHIC2Q9UKJ5 165 aa4.37□□□□□ -1.71
PTP4A1-204ENST00000578299 PALM3A6NDB9 673 aaPredicted RBP4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 ERVH48-1M5A8F1 160 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 NR3C2P08235 984 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 SMPD1P17405 629 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 NNTQ13423 1086 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 LAPTM4AQ15012 233 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 PPP1R26Q5T8A7 1209 aaPredicted RBP4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 TBC1D9Q6ZT07 1266 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 CCDC85AQ96PX6 553 aaPredicted RBP4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 PGPEP1Q9NXJ5 209 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 DOLKQ9UPQ8 538 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 PCDHB11Q9Y5F2 797 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 MAFBQ9Y5Q3 323 aaPredicted RBP4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 EMILIN1Q9Y6C2 1016 aa4.36□□□□□ -1.71
PTP4A1-204ENST00000578299 USP17L5A8MUK1 530 aa4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 NRG2O14511 850 aaPredicted RBP4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 GFRA3O60609 400 aa4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 CFAP70Q5T0N1 1121 aa4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 TRAF7Q6Q0C0 670 aa4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 PLEKHM2Q8IWE5 1019 aa4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 SIRT1Q96EB6 747 aa4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 ESF1Q9H501 851 aaKnown RBP4.35□□□□□ -1.71
PTP4A1-204ENST00000578299 USP17L3A6NCW0 530 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 USP17L4A6NCW7 530 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 FAM187AA6NFU0 413 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 DGAT1O75907 488 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 MYCP01106 439 aaPredicted RBP4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 LMOD1P29536 600 aaPredicted RBP4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 ERVK-9P63128 1117 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 MYT1Q01538 1121 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 USP4Q13107 963 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 EML3Q32P44 896 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 TSGA10IPQ3SY00 556 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 CC2D2BQ6DHV5 1058 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 USP17L2Q6R6M4 530 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 USP17L1Q7RTZ2 530 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 ARID3AQ99856 593 aa4.34□□□□□ -1.71
PTP4A1-204ENST00000578299 WDR4P57081 412 aaKnown RBP4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 NCOA4Q13772 614 aa4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 PKDCCQ504Y2 493 aa4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 OXLD1Q5BKU9 147 aa4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 ZNF784Q8NCA9 323 aaPredicted RBP4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 HPS1Q92902 700 aa4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 CDCA7Q9BWT1 371 aaPredicted RBP4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 KLF16Q9BXK1 252 aaPredicted RBP4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 IRX2Q9BZI1 471 aaPredicted RBP4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 CYLDQ9NQC7 956 aa4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 TMPRSS4Q9NRS4 437 aa4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 NOD1Q9Y239 953 aa4.33□□□□□ -1.72
PTP4A1-204ENST00000578299 ATP5J2-PTCD1G3V325 749 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 LILRA1O75019 489 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 ZIC2O95409 532 aaPredicted RBP4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 AVPP01185 164 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 TIMP2P16035 220 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 TRIM50Q86XT4 487 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 DEPDC4Q8N2C3 294 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 ITPKCQ96DU7 683 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 VRTNQ9H8Y1 702 aa4.32□□□□□ -1.72
PTP4A1-204ENST00000578299 PPP1R15AO75807 674 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms