RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 AATKQ6ZMQ8 1374 aa17.32■□□□□ 0.36
CTNS-208ENST00000574218 NLRP6P59044 892 aa17.32■□□□□ 0.36
CTNS-208ENST00000574218 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
CTNS-208ENST00000574218 ZBTB7AO95365 584 aa17.31■□□□□ 0.36
CTNS-208ENST00000574218 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
CTNS-208ENST00000574218 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
CTNS-208ENST00000574218 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
CTNS-208ENST00000574218 SLIT3O75094 1523 aa17.31■□□□□ 0.36
CTNS-208ENST00000574218 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
CTNS-208ENST00000574218 COL18A1P39060 1754 aa17.3■□□□□ 0.36
CTNS-208ENST00000574218 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
CTNS-208ENST00000574218 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
CTNS-208ENST00000574218 USP6P35125 1406 aa17.29■□□□□ 0.36
CTNS-208ENST00000574218 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
CTNS-208ENST00000574218 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
CTNS-208ENST00000574218 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
CTNS-208ENST00000574218 BCL9O00512 1426 aa17.25■□□□□ 0.35
CTNS-208ENST00000574218 CPSF1Q10570 1443 aaKnown RBP17.25■□□□□ 0.35
CTNS-208ENST00000574218 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
CTNS-208ENST00000574218 MARCH10Q8NA82 808 aaPredicted RBP17.25■□□□□ 0.35
CTNS-208ENST00000574218 ZNF784Q8NCA9 323 aaPredicted RBP17.25■□□□□ 0.35
CTNS-208ENST00000574218 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
CTNS-208ENST00000574218 EXOC5O00471 708 aa17.24■□□□□ 0.35
CTNS-208ENST00000574218 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
CTNS-208ENST00000574218 PDGFDQ9GZP0 370 aaPredicted RBP17.24■□□□□ 0.35
CTNS-208ENST00000574218 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
CTNS-208ENST00000574218 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
CTNS-208ENST00000574218 PTGER2P43116 358 aa17.23■□□□□ 0.35
CTNS-208ENST00000574218 SLC15A2Q16348 729 aa17.23■□□□□ 0.35
CTNS-208ENST00000574218 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
CTNS-208ENST00000574218 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
CTNS-208ENST00000574218 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
CTNS-208ENST00000574218 MTFR1LQ9H019 292 aa17.23■□□□□ 0.35
CTNS-208ENST00000574218 SOX12O15370 315 aa17.22■□□□□ 0.35
CTNS-208ENST00000574218 PROM2Q8N271 834 aa17.22■□□□□ 0.35
CTNS-208ENST00000574218 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
CTNS-208ENST00000574218 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
CTNS-208ENST00000574218 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
CTNS-208ENST00000574218 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
CTNS-208ENST00000574218 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
CTNS-208ENST00000574218 AXIN2Q9Y2T1 843 aa17.2■□□□□ 0.34
CTNS-208ENST00000574218 TNS2Q63HR2 1409 aa17.2■□□□□ 0.34
CTNS-208ENST00000574218 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
CTNS-208ENST00000574218 BTAF1O14981 1849 aa17.19■□□□□ 0.34
CTNS-208ENST00000574218 ARXQ96QS3 562 aa17.18■□□□□ 0.34
CTNS-208ENST00000574218 ZNF692Q9BU19 519 aaPredicted RBP17.18■□□□□ 0.34
CTNS-208ENST00000574218 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
CTNS-208ENST00000574218 TTC21AQ8NDW8 1320 aa17.18■□□□□ 0.34
CTNS-208ENST00000574218 ABCC6O95255 1503 aa17.17■□□□□ 0.34
CTNS-208ENST00000574218 LTN1O94822 1766 aa17.17■□□□□ 0.34
CTNS-208ENST00000574218 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
CTNS-208ENST00000574218 ACSBG1Q96GR2 724 aa17.15■□□□□ 0.34
CTNS-208ENST00000574218 QSER1Q2KHR3 1735 aa17.14■□□□□ 0.33
CTNS-208ENST00000574218 MON2Q7Z3U7 1717 aa17.14■□□□□ 0.33
CTNS-208ENST00000574218 GPR162Q16538 588 aa17.14■□□□□ 0.33
CTNS-208ENST00000574218 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
CTNS-208ENST00000574218 NFAT5O94916 1531 aa17.14■□□□□ 0.33
CTNS-208ENST00000574218 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
CTNS-208ENST00000574218 UTRNP46939 3433 aa17.13■□□□□ 0.33
CTNS-208ENST00000574218 KTN1Q86UP2 1357 aaKnown RBP17.13■□□□□ 0.33
CTNS-208ENST00000574218 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
CTNS-208ENST00000574218 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
CTNS-208ENST00000574218 MAP3K5Q99683 1374 aa17.12■□□□□ 0.33
CTNS-208ENST00000574218 POLD1P28340 1107 aa17.11■□□□□ 0.33
CTNS-208ENST00000574218 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
CTNS-208ENST00000574218 IL2RBP14784 551 aa17.1■□□□□ 0.33
CTNS-208ENST00000574218 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
CTNS-208ENST00000574218 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
CTNS-208ENST00000574218 SLC16A10Q8TF71 515 aa17.08■□□□□ 0.32
CTNS-208ENST00000574218 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
CTNS-208ENST00000574218 ERBB3P21860 1342 aa17.07■□□□□ 0.32
CTNS-208ENST00000574218 TUBGCP6Q96RT7 1819 aa17.07■□□□□ 0.32
CTNS-208ENST00000574218 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
CTNS-208ENST00000574218 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
CTNS-208ENST00000574218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTNS-208ENST00000574218 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
CTNS-208ENST00000574218 SLC27A3Q5K4L6 730 aa17.04■□□□□ 0.32
CTNS-208ENST00000574218 ANKRD24Q8TF21 1146 aa17.04■□□□□ 0.32
CTNS-208ENST00000574218 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
CTNS-208ENST00000574218 TFCP2L1Q9NZI6 479 aa17.03■□□□□ 0.32
CTNS-208ENST00000574218 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
CTNS-208ENST00000574218 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.32
CTNS-208ENST00000574218 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
CTNS-208ENST00000574218 LRRC4BQ9NT99 713 aa17.02■□□□□ 0.32
CTNS-208ENST00000574218 LY75O60449 1722 aa17.01■□□□□ 0.31
CTNS-208ENST00000574218 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
CTNS-208ENST00000574218 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
CTNS-208ENST00000574218 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
CTNS-208ENST00000574218 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
CTNS-208ENST00000574218 NME9Q86XW9 330 aa17■□□□□ 0.31
CTNS-208ENST00000574218 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
CTNS-208ENST00000574218 GRIN3BO60391 1043 aa16.99■□□□□ 0.31
CTNS-208ENST00000574218 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
CTNS-208ENST00000574218 IFFO2Q5TF58 517 aa16.98■□□□□ 0.31
CTNS-208ENST00000574218 LTV1Q96GA3 475 aaPredicted RBP16.97■□□□□ 0.31
CTNS-208ENST00000574218 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.31
CTNS-208ENST00000574218 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
CTNS-208ENST00000574218 ANKRD36BQ8N2N9 1353 aa16.95■□□□□ 0.3
CTNS-208ENST00000574218 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
CTNS-208ENST00000574218 NLGN2Q8NFZ4 835 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms