RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 HMOX1P09601 288 aa16.83■□□□□ 0.28
PRPF8-207ENST00000573681 SLAIN2Q9P270 581 aa16.83■□□□□ 0.28
PRPF8-207ENST00000573681 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
PRPF8-207ENST00000573681 KIF1AQ12756 1690 aa16.82■□□□□ 0.28
PRPF8-207ENST00000573681 HOXC9P31274 260 aa16.82■□□□□ 0.28
PRPF8-207ENST00000573681 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
PRPF8-207ENST00000573681 IP6K1Q92551 441 aa16.82■□□□□ 0.28
PRPF8-207ENST00000573681 IL16Q14005 1332 aa16.81■□□□□ 0.28
PRPF8-207ENST00000573681 GCP02774 474 aa16.81■□□□□ 0.28
PRPF8-207ENST00000573681 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
PRPF8-207ENST00000573681 SULT6B1Q6IMI4 303 aa16.81■□□□□ 0.28
PRPF8-207ENST00000573681 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
PRPF8-207ENST00000573681 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
PRPF8-207ENST00000573681 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
PRPF8-207ENST00000573681 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
PRPF8-207ENST00000573681 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
PRPF8-207ENST00000573681 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
PRPF8-207ENST00000573681 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
PRPF8-207ENST00000573681 USP19O94966 1318 aa16.79■□□□□ 0.28
PRPF8-207ENST00000573681 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
PRPF8-207ENST00000573681 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
PRPF8-207ENST00000573681 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
PRPF8-207ENST00000573681 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
PRPF8-207ENST00000573681 RRP1P56182 461 aaKnown RBP16.77■□□□□ 0.28
PRPF8-207ENST00000573681 BRINP3Q76B58 766 aa16.77■□□□□ 0.28
PRPF8-207ENST00000573681 EYA1Q99502 592 aa16.76■□□□□ 0.27
PRPF8-207ENST00000573681 IGSF1Q8N6C5 1336 aa16.75■□□□□ 0.27
PRPF8-207ENST00000573681 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
PRPF8-207ENST00000573681 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
PRPF8-207ENST00000573681 SPATA31A3Q5VYP0 1347 aa16.74■□□□□ 0.27
PRPF8-207ENST00000573681 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
PRPF8-207ENST00000573681 AEBP1Q8IUX7 1158 aa16.74■□□□□ 0.27
PRPF8-207ENST00000573681 PPP4R2Q9NY27 417 aa16.74■□□□□ 0.27
PRPF8-207ENST00000573681 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
PRPF8-207ENST00000573681 SLIT3O75094 1523 aa16.73■□□□□ 0.27
PRPF8-207ENST00000573681 KDRP35968 1356 aa16.73■□□□□ 0.27
PRPF8-207ENST00000573681 SOS2Q07890 1332 aaPredicted RBP16.72■□□□□ 0.27
PRPF8-207ENST00000573681 NFAT5O94916 1531 aa16.72■□□□□ 0.27
PRPF8-207ENST00000573681 DDX17Q92841 729 aaKnown RBP16.72■□□□□ 0.27
PRPF8-207ENST00000573681 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
PRPF8-207ENST00000573681 GNAI1P63096 354 aa16.71■□□□□ 0.27
PRPF8-207ENST00000573681 LTV1Q96GA3 475 aaPredicted RBP16.71■□□□□ 0.27
PRPF8-207ENST00000573681 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
PRPF8-207ENST00000573681 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
PRPF8-207ENST00000573681 GAS2L2Q8NHY3 880 aa16.7■□□□□ 0.26
PRPF8-207ENST00000573681 MARF1Q9Y4F3 1742 aaKnown RBP16.7■□□□□ 0.26
PRPF8-207ENST00000573681 PXDNQ92626 1479 aa16.69■□□□□ 0.26
PRPF8-207ENST00000573681 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
PRPF8-207ENST00000573681 IFT57Q9NWB7 429 aa16.69■□□□□ 0.26
PRPF8-207ENST00000573681 XIRP1Q702N8 1843 aaKnown RBP16.68■□□□□ 0.26
PRPF8-207ENST00000573681 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
PRPF8-207ENST00000573681 PELP1Q8IZL8 1130 aaKnown RBP16.67■□□□□ 0.26
PRPF8-207ENST00000573681 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
PRPF8-207ENST00000573681 ZNF853P0CG23 659 aa16.66■□□□□ 0.26
PRPF8-207ENST00000573681 RGPD1P0DJD0 1748 aa16.66■□□□□ 0.26
PRPF8-207ENST00000573681 ZC3H6P61129 1189 aaKnown RBP16.66■□□□□ 0.26
PRPF8-207ENST00000573681 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
PRPF8-207ENST00000573681 NBPF6Q5VWK0 638 aa16.66■□□□□ 0.26
PRPF8-207ENST00000573681 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
PRPF8-207ENST00000573681 RTF1Q92541 710 aaKnown RBP16.66■□□□□ 0.26
PRPF8-207ENST00000573681 ZNF428Q96B54 188 aa16.66■□□□□ 0.26
PRPF8-207ENST00000573681 NBPF4Q96M43 638 aa16.66■□□□□ 0.26
PRPF8-207ENST00000573681 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
PRPF8-207ENST00000573681 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
PRPF8-207ENST00000573681 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
PRPF8-207ENST00000573681 PHRF1Q9P1Y6 1649 aaKnown RBP16.65■□□□□ 0.26
PRPF8-207ENST00000573681 ALS2Q96Q42 1657 aa16.65■□□□□ 0.26
PRPF8-207ENST00000573681 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
PRPF8-207ENST00000573681 PLIN1O60240 522 aa16.63■□□□□ 0.25
PRPF8-207ENST00000573681 AMOTQ4VCS5 1084 aa16.63■□□□□ 0.25
PRPF8-207ENST00000573681 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
PRPF8-207ENST00000573681 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
PRPF8-207ENST00000573681 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
PRPF8-207ENST00000573681 CPDO75976 1380 aa16.63■□□□□ 0.25
PRPF8-207ENST00000573681 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
PRPF8-207ENST00000573681 BCAR3O75815 825 aa16.62■□□□□ 0.25
PRPF8-207ENST00000573681 PDE3AQ14432 1141 aa16.62■□□□□ 0.25
PRPF8-207ENST00000573681 PLEKHO1Q53GL0 409 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-207ENST00000573681 MED1Q15648 1581 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-207ENST00000573681 CHL1O00533 1208 aa16.61■□□□□ 0.25
PRPF8-207ENST00000573681 LRRC59Q96AG4 307 aaKnown RBP16.61■□□□□ 0.25
PRPF8-207ENST00000573681 THUMPD2Q9BTF0 503 aaKnown RBP16.61■□□□□ 0.25
PRPF8-207ENST00000573681 FAM83GA6ND36 823 aa16.6■□□□□ 0.25
PRPF8-207ENST00000573681 MS4A1P11836 297 aa16.6■□□□□ 0.25
PRPF8-207ENST00000573681 HAP1P54257 671 aaPredicted RBP16.6■□□□□ 0.25
PRPF8-207ENST00000573681 ALDH1L2Q3SY69 923 aa16.6■□□□□ 0.25
PRPF8-207ENST00000573681 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
PRPF8-207ENST00000573681 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
PRPF8-207ENST00000573681 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
PRPF8-207ENST00000573681 USHBP1Q8N6Y0 703 aa16.59■□□□□ 0.25
PRPF8-207ENST00000573681 EXOC6Q8TAG9 804 aa16.59■□□□□ 0.25
PRPF8-207ENST00000573681 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
PRPF8-207ENST00000573681 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
PRPF8-207ENST00000573681 MCM10Q7L590 875 aa16.58■□□□□ 0.24
PRPF8-207ENST00000573681 ERBB3P21860 1342 aa16.58■□□□□ 0.24
PRPF8-207ENST00000573681 ABCC6O95255 1503 aa16.58■□□□□ 0.24
PRPF8-207ENST00000573681 LTN1O94822 1766 aa16.58■□□□□ 0.24
PRPF8-207ENST00000573681 NCAPD2Q15021 1401 aa16.57■□□□□ 0.24
PRPF8-207ENST00000573681 TOM1O60784 492 aa16.57■□□□□ 0.24
PRPF8-207ENST00000573681 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms