RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CEP350Q5VT06 3117 aa15.46■□□□□ 0.07
CTDNEP1-202ENST00000570380 COL18A1P39060 1754 aa15.46■□□□□ 0.07
CTDNEP1-202ENST00000570380 RGPD5Q99666 1765 aa15.45■□□□□ 0.06
CTDNEP1-202ENST00000570380 PLEKHG3A1L390 1219 aa15.45■□□□□ 0.06
CTDNEP1-202ENST00000570380 MARCH10Q8NA82 808 aaPredicted RBP15.45■□□□□ 0.06
CTDNEP1-202ENST00000570380 MTFR1LQ9H019 292 aa15.45■□□□□ 0.06
CTDNEP1-202ENST00000570380 KDM2AQ9Y2K7 1162 aa15.45■□□□□ 0.06
CTDNEP1-202ENST00000570380 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
CTDNEP1-202ENST00000570380 BCL9O00512 1426 aa15.44■□□□□ 0.06
CTDNEP1-202ENST00000570380 NLRP13Q86W25 1043 aa15.44■□□□□ 0.06
CTDNEP1-202ENST00000570380 GOLGB1Q14789 3259 aaKnown RBP15.42■□□□□ 0.06
CTDNEP1-202ENST00000570380 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
CTDNEP1-202ENST00000570380 TOM1L2Q6ZVM7 507 aa15.42■□□□□ 0.06
CTDNEP1-202ENST00000570380 DCAF11Q8TEB1 546 aa15.42■□□□□ 0.06
CTDNEP1-202ENST00000570380 ARXQ96QS3 562 aa15.42■□□□□ 0.06
CTDNEP1-202ENST00000570380 AATKQ6ZMQ8 1374 aa15.41■□□□□ 0.06
CTDNEP1-202ENST00000570380 GIGYF1O75420 1035 aaPredicted RBP15.41■□□□□ 0.06
CTDNEP1-202ENST00000570380 MAP3K5Q99683 1374 aa15.4■□□□□ 0.06
CTDNEP1-202ENST00000570380 SHANK3Q9BYB0 1731 aa15.4■□□□□ 0.06
CTDNEP1-202ENST00000570380 PAPPAQ13219 1627 aa15.39■□□□□ 0.05
CTDNEP1-202ENST00000570380 SLIT3O75094 1523 aa15.39■□□□□ 0.05
CTDNEP1-202ENST00000570380 KAT6BQ8WYB5 2073 aa15.39■□□□□ 0.05
CTDNEP1-202ENST00000570380 NHSQ6T4R5 1651 aa15.38■□□□□ 0.05
CTDNEP1-202ENST00000570380 GPR162Q16538 588 aa15.38■□□□□ 0.05
CTDNEP1-202ENST00000570380 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
CTDNEP1-202ENST00000570380 WDR17Q8IZU2 1322 aa15.38■□□□□ 0.05
CTDNEP1-202ENST00000570380 CDCA7Q9BWT1 371 aaPredicted RBP15.37■□□□□ 0.05
CTDNEP1-202ENST00000570380 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
CTDNEP1-202ENST00000570380 PPIP5K1Q6PFW1 1433 aa15.36■□□□□ 0.05
CTDNEP1-202ENST00000570380 BTAF1O14981 1849 aa15.36■□□□□ 0.05
CTDNEP1-202ENST00000570380 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
CTDNEP1-202ENST00000570380 NLRP6P59044 892 aa15.35■□□□□ 0.05
CTDNEP1-202ENST00000570380 STAC3Q96MF2 364 aa15.35■□□□□ 0.05
CTDNEP1-202ENST00000570380 BRD4O60885 1362 aaPredicted RBP15.34■□□□□ 0.05
CTDNEP1-202ENST00000570380 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
CTDNEP1-202ENST00000570380 EXOC5O00471 708 aa15.33■□□□□ 0.04
CTDNEP1-202ENST00000570380 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.04
CTDNEP1-202ENST00000570380 KIAA1210Q9ULL0 1709 aa15.32■□□□□ 0.04
CTDNEP1-202ENST00000570380 ZNF827Q17R98 1081 aa15.32■□□□□ 0.04
CTDNEP1-202ENST00000570380 USP6P35125 1406 aa15.32■□□□□ 0.04
CTDNEP1-202ENST00000570380 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
CTDNEP1-202ENST00000570380 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
CTDNEP1-202ENST00000570380 SRPK2P78362 688 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-202ENST00000570380 ACSBG1Q96GR2 724 aa15.31■□□□□ 0.04
CTDNEP1-202ENST00000570380 CABP2Q9NPB3 220 aa15.31■□□□□ 0.04
CTDNEP1-202ENST00000570380 CPSF1Q10570 1443 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-202ENST00000570380 TNS2Q63HR2 1409 aa15.3■□□□□ 0.04
CTDNEP1-202ENST00000570380 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
CTDNEP1-202ENST00000570380 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-202ENST00000570380 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
CTDNEP1-202ENST00000570380 QRICH2Q9H0J4 1663 aa15.3■□□□□ 0.04
CTDNEP1-202ENST00000570380 CSB-PGBD3P0DP91 1061 aa15.29■□□□□ 0.04
CTDNEP1-202ENST00000570380 LRRC4BQ9NT99 713 aa15.29■□□□□ 0.04
CTDNEP1-202ENST00000570380 CABP1Q9NZU7 370 aa15.29■□□□□ 0.04
CTDNEP1-202ENST00000570380 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
CTDNEP1-202ENST00000570380 ABCC6O95255 1503 aa15.27■□□□□ 0.04
CTDNEP1-202ENST00000570380 CCDC7Q96M83 1385 aa15.27■□□□□ 0.04
CTDNEP1-202ENST00000570380 SLC16A10Q8TF71 515 aa15.27■□□□□ 0.04
CTDNEP1-202ENST00000570380 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
CTDNEP1-202ENST00000570380 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
CTDNEP1-202ENST00000570380 SOX12O15370 315 aa15.25■□□□□ 0.03
CTDNEP1-202ENST00000570380 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.033e-6■■■□□ 15.5
CTDNEP1-202ENST00000570380 POLD1P28340 1107 aa15.25■□□□□ 0.03
CTDNEP1-202ENST00000570380 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
CTDNEP1-202ENST00000570380 NFAT5O94916 1531 aa15.24■□□□□ 0.03
CTDNEP1-202ENST00000570380 KCNH5Q8NCM2 988 aa15.24■□□□□ 0.03
CTDNEP1-202ENST00000570380 PNPLA7Q6ZV29 1317 aa15.23■□□□□ 0.03
CTDNEP1-202ENST00000570380 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-202ENST00000570380 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
CTDNEP1-202ENST00000570380 TTC21BQ7Z4L5 1316 aa15.22■□□□□ 0.03
CTDNEP1-202ENST00000570380 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
CTDNEP1-202ENST00000570380 LTN1O94822 1766 aa15.21■□□□□ 0.03
CTDNEP1-202ENST00000570380 LY75O60449 1722 aa15.21■□□□□ 0.03
CTDNEP1-202ENST00000570380 HSPA6P17066 643 aa15.21■□□□□ 0.03
CTDNEP1-202ENST00000570380 IL2RBP14784 551 aa15.19■□□□□ 0.02
CTDNEP1-202ENST00000570380 SLC27A3Q5K4L6 730 aa15.19■□□□□ 0.02
CTDNEP1-202ENST00000570380 KCNQ4P56696 695 aa15.18■□□□□ 0.02
CTDNEP1-202ENST00000570380 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-202ENST00000570380 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
CTDNEP1-202ENST00000570380 TFCP2L1Q9NZI6 479 aa15.18■□□□□ 0.02
CTDNEP1-202ENST00000570380 ERBB3P21860 1342 aa15.17■□□□□ 0.02
CTDNEP1-202ENST00000570380 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
CTDNEP1-202ENST00000570380 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
CTDNEP1-202ENST00000570380 MON2Q7Z3U7 1717 aa15.15■□□□□ 0.02
CTDNEP1-202ENST00000570380 DOT1LQ8TEK3 1739 aa15.15■□□□□ 0.02
CTDNEP1-202ENST00000570380 ADCY9O60503 1353 aa15.15■□□□□ 0.02
CTDNEP1-202ENST00000570380 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
CTDNEP1-202ENST00000570380 ZNF526Q8TF50 670 aaPredicted RBP15.14■□□□□ 0.01
CTDNEP1-202ENST00000570380 EVC2Q86UK5 1308 aa15.14■□□□□ 0.01
CTDNEP1-202ENST00000570380 COL23A1Q86Y22 540 aaPredicted RBP15.13■□□□□ 0.01
CTDNEP1-202ENST00000570380 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-202ENST00000570380 ANKRD24Q8TF21 1146 aa15.12■□□□□ 0.01
CTDNEP1-202ENST00000570380 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
CTDNEP1-202ENST00000570380 MSH5O43196 834 aa15.1■□□□□ 0.01
CTDNEP1-202ENST00000570380 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
CTDNEP1-202ENST00000570380 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
CTDNEP1-202ENST00000570380 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
CTDNEP1-202ENST00000570380 NSD2O96028 1365 aa15.1■□□□□ 0.01
CTDNEP1-202ENST00000570380 USP31Q70CQ4 1352 aa15.1■□□□□ 0.01
CTDNEP1-202ENST00000570380 FAM208AQ9UK61 1670 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms