RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 ARIH1Q9Y4X5 557 aaPredicted RBP7.08□□□□□ -1.28
CNOT1-219ENST00000569882 MED14O60244 1454 aa7.08□□□□□ -1.28
CNOT1-219ENST00000569882 SETD5Q9C0A6 1442 aa7.08□□□□□ -1.28
CNOT1-219ENST00000569882 TMEM131LA2VDJ0 1609 aa7.08□□□□□ -1.28
CNOT1-219ENST00000569882 IQSEC2Q5JU85 1478 aa7.07□□□□□ -1.28
CNOT1-219ENST00000569882 ARHGAP23Q9P227 1491 aa7.07□□□□□ -1.28
CNOT1-219ENST00000569882 GRXCR2A6NFK2 248 aa7.07□□□□□ -1.28
CNOT1-219ENST00000569882 WNT2BQ93097 391 aa7.07□□□□□ -1.28
CNOT1-219ENST00000569882 LTBP4Q8N2S1 1624 aa7.07□□□□□ -1.28
CNOT1-219ENST00000569882 CCDC144AA2RUR9 1427 aa7.07□□□□□ -1.28
CNOT1-219ENST00000569882 TRPM2O94759 1503 aa7.06□□□□□ -1.28
CNOT1-219ENST00000569882 EN1Q05925 392 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-219ENST00000569882 MRPL50Q8N5N7 158 aaKnown RBP7.06□□□□□ -1.28
CNOT1-219ENST00000569882 CLTCL1P53675 1640 aa7.05□□□□□ -1.28
CNOT1-219ENST00000569882 MAP3K7O43318 606 aa7.05□□□□□ -1.28
CNOT1-219ENST00000569882 PROSER2Q86WR7 435 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-219ENST00000569882 MPHOSPH9Q99550 1183 aa7.05□□□□□ -1.28
CNOT1-219ENST00000569882 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
CNOT1-219ENST00000569882 RABGEF1Q9UJ41 708 aa7.05□□□□□ -1.28
CNOT1-219ENST00000569882 RAB3GAP2Q9H2M9 1393 aa7.05□□□□□ -1.28
CNOT1-219ENST00000569882 PLEKHG1Q9ULL1 1385 aa7.05□□□□□ -1.28
CNOT1-219ENST00000569882 RGL3Q3MIN7 710 aa7.04□□□□□ -1.28
CNOT1-219ENST00000569882 KCNV2Q8TDN2 545 aa7.04□□□□□ -1.28
CNOT1-219ENST00000569882 DIP2AQ14689 1571 aa7.03□□□□□ -1.28
CNOT1-219ENST00000569882 LCE2BO14633 110 aa7.03□□□□□ -1.28
CNOT1-219ENST00000569882 KCNA6P17658 529 aa7.03□□□□□ -1.28
CNOT1-219ENST00000569882 OSBPP22059 807 aa7.03□□□□□ -1.28
CNOT1-219ENST00000569882 NBPF3Q9H094 633 aa7.03□□□□□ -1.28
CNOT1-219ENST00000569882 SEPT9Q9UHD8 586 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-219ENST00000569882 MSH6P52701 1360 aa7.03□□□□□ -1.28
CNOT1-219ENST00000569882 ZFYVE9O95405 1425 aa7.02□□□□□ -1.29
CNOT1-219ENST00000569882 TRIM6-TRIM34B2RNG4 842 aa7.02□□□□□ -1.29
CNOT1-219ENST00000569882 ZNF775Q96BV0 537 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-219ENST00000569882 TSKSQ9UJT2 592 aa7.02□□□□□ -1.29
CNOT1-219ENST00000569882 NKTRP30414 1462 aaKnown RBP7.02□□□□□ -1.29
CNOT1-219ENST00000569882 STRCP1A6NGW2 1772 aa7.02□□□□□ -1.29
CNOT1-219ENST00000569882 LRRC7Q96NW7 1537 aa7.01□□□□□ -1.29
CNOT1-219ENST00000569882 TMEM94Q12767 1356 aa7.01□□□□□ -1.29
CNOT1-219ENST00000569882 ATF3P18847 181 aa7.01□□□□□ -1.29
CNOT1-219ENST00000569882 PLCB2Q00722 1185 aa7.01□□□□□ -1.29
CNOT1-219ENST00000569882 CDHR5Q9HBB8 845 aa7.01□□□□□ -1.29
CNOT1-219ENST00000569882 TBX22Q9Y458 520 aa7.01□□□□□ -1.29
CNOT1-219ENST00000569882 CHD2O14647 1828 aaKnown RBP7.01□□□□□ -1.29
CNOT1-219ENST00000569882 RPGRIP1LQ68CZ1 1315 aa7.01□□□□□ -1.29
CNOT1-219ENST00000569882 MLLT3P42568 568 aaPredicted RBP7□□□□□ -1.29
CNOT1-219ENST00000569882 NEXMIFQ5QGS0 1516 aa7□□□□□ -1.29
CNOT1-219ENST00000569882 PPLO60437 1756 aa7□□□□□ -1.29
CNOT1-219ENST00000569882 PIK3R4Q99570 1358 aa6.99□□□□□ -1.29
CNOT1-219ENST00000569882 C3orf80F5H4A9 247 aa6.99□□□□□ -1.29
CNOT1-219ENST00000569882 ITGBL1O95965 494 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-219ENST00000569882 BCAMP50895 628 aa6.99□□□□□ -1.29
CNOT1-219ENST00000569882 FAM198AQ9UFP1 575 aa6.99□□□□□ -1.29
CNOT1-219ENST00000569882 AMOTL2Q9Y2J4 779 aa6.99□□□□□ -1.29
CNOT1-219ENST00000569882 NWD1Q149M9 1564 aa6.99□□□□□ -1.29
CNOT1-219ENST00000569882 ANKRD30BQ9BXX2 1392 aa6.98□□□□□ -1.29
CNOT1-219ENST00000569882 ONECUT3O60422 494 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-219ENST00000569882 ARHGEF1Q92888 912 aaKnown RBP6.98□□□□□ -1.29
CNOT1-219ENST00000569882 CDCA7LQ96GN5 454 aa6.98□□□□□ -1.29
CNOT1-219ENST00000569882 ZFRQ96KR1 1074 aaKnown RBP6.98□□□□□ -1.29
CNOT1-219ENST00000569882 SETBP1Q9Y6X0 1596 aa6.98□□□□□ -1.29
CNOT1-219ENST00000569882 DISP3Q9P2K9 1392 aa6.97□□□□□ -1.29
CNOT1-219ENST00000569882 XIRP1Q702N8 1843 aaKnown RBP6.97□□□□□ -1.29
CNOT1-219ENST00000569882 SMAPO00193 183 aa6.97□□□□□ -1.29
CNOT1-219ENST00000569882 NRG2O14511 850 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-219ENST00000569882 ADAMTS13Q76LX8 1427 aa6.97□□□□□ -1.29
CNOT1-219ENST00000569882 STK26Q9P289 416 aa6.97□□□□□ -1.29
CNOT1-219ENST00000569882 KDM2AQ9Y2K7 1162 aa6.97□□□□□ -1.29
CNOT1-219ENST00000569882 HSPA1LP34931 641 aa6.96□□□□□ -1.3
CNOT1-219ENST00000569882 PRSS12P56730 875 aa6.96□□□□□ -1.3
CNOT1-219ENST00000569882 LAPTM4BQ86VI4 370 aa6.96□□□□□ -1.3
CNOT1-219ENST00000569882 ANKK1Q8NFD2 765 aa6.96□□□□□ -1.3
CNOT1-219ENST00000569882 LAMC1P11047 1609 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 ALKQ9UM73 1620 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 NRXN3Q9Y4C0 1643 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 SOWAHBA6NEL2 793 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 HRCP23327 699 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 KCNC4Q03721 635 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-219ENST00000569882 FAM98CQ17RN3 349 aaKnown RBP6.95□□□□□ -1.3
CNOT1-219ENST00000569882 PACS2Q86VP3 889 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 DCAF11Q8TEB1 546 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 C19orf44Q9H6X5 657 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 NPDC1Q9NQX5 325 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-219ENST00000569882 DAXXQ9UER7 740 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-219ENST00000569882 ROBO1Q9Y6N7 1651 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 IFT172Q9UG01 1749 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 METP08581 1390 aa6.95□□□□□ -1.3
CNOT1-219ENST00000569882 NCOA3Q9Y6Q9 1424 aa6.94□□□□□ -1.3
CNOT1-219ENST00000569882 PHLPP1O60346 1717 aa6.94□□□□□ -1.3
CNOT1-219ENST00000569882 XRN1Q8IZH2 1706 aaKnown RBP6.94□□□□□ -1.3
CNOT1-219ENST00000569882 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-219ENST00000569882 MYT1Q01538 1121 aa6.94□□□□□ -1.3
CNOT1-219ENST00000569882 WBP1LQ9NX94 342 aa6.94□□□□□ -1.3
CNOT1-219ENST00000569882 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
CNOT1-219ENST00000569882 ADGRF5Q8IZF2 1346 aa6.94□□□□□ -1.3
CNOT1-219ENST00000569882 MEX3CQ5U5Q3 659 aaKnown RBP6.93□□□□□ -1.3
CNOT1-219ENST00000569882 POGKQ9P215 609 aa6.93□□□□□ -1.3
CNOT1-219ENST00000569882 DHX57Q6P158 1386 aaKnown RBP6.93□□□□□ -1.3
CNOT1-219ENST00000569882 SPATA31E1Q6ZUB1 1445 aa6.93□□□□□ -1.3
CNOT1-219ENST00000569882 PTPRUQ92729 1446 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms