RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 FOXK1P85037 733 aa14.84□□□□□ -0.03
LYRM1-210ENST00000568820 CDK19Q9BWU1 502 aa14.84□□□□□ -0.03
LYRM1-210ENST00000568820 ADAMTS8Q9UP79 889 aa14.84□□□□□ -0.03
LYRM1-210ENST00000568820 POLR3AO14802 1390 aaPredicted RBP14.84□□□□□ -0.03
LYRM1-210ENST00000568820 PLEKHG1Q9ULL1 1385 aa14.84□□□□□ -0.03
LYRM1-210ENST00000568820 HDGFL2Q7Z4V5 671 aaPredicted RBP14.84□□□□□ -0.03
LYRM1-210ENST00000568820 NRXN3Q9Y4C0 1643 aa14.84□□□□□ -0.03
LYRM1-210ENST00000568820 TECPR2O15040 1411 aa14.83□□□□□ -0.03
LYRM1-210ENST00000568820 FER1L4A9Z1Z3 1794 aa14.83□□□□□ -0.04
LYRM1-210ENST00000568820 METP08581 1390 aa14.82□□□□□ -0.04
LYRM1-210ENST00000568820 C3P01024 1663 aa14.82□□□□□ -0.04
LYRM1-210ENST00000568820 CEBPAP49715 358 aaPredicted RBP14.82□□□□□ -0.04
LYRM1-210ENST00000568820 THEMISQ8N1K5 641 aaPredicted RBP14.82□□□□□ -0.04
LYRM1-210ENST00000568820 LARP6Q9BRS8 491 aaKnown RBP14.82□□□□□ -0.04
LYRM1-210ENST00000568820 A0A1W2PP64 1363 aa14.82□□□□□ -0.04
LYRM1-210ENST00000568820 DSG2Q14126 1118 aa14.81□□□□□ -0.04
LYRM1-210ENST00000568820 NGEFQ8N5V2 710 aa14.81□□□□□ -0.04
LYRM1-210ENST00000568820 TXNDC2Q86VQ3 553 aa14.81□□□□□ -0.04
LYRM1-210ENST00000568820 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
LYRM1-210ENST00000568820 KNDC1Q76NI1 1749 aa14.8□□□□□ -0.04
LYRM1-210ENST00000568820 WAPLQ7Z5K2 1190 aa14.8□□□□□ -0.04
LYRM1-210ENST00000568820 SLIT1O75093 1534 aa14.8□□□□□ -0.04
LYRM1-210ENST00000568820 SNPHO15079 494 aa14.79□□□□□ -0.04
LYRM1-210ENST00000568820 PPP1R15BQ5SWA1 713 aa14.79□□□□□ -0.04
LYRM1-210ENST00000568820 DDX27Q96GQ7 796 aaKnown RBP14.79□□□□□ -0.04
LYRM1-210ENST00000568820 ARHGAP23Q9P227 1491 aa14.78□□□□□ -0.04
LYRM1-210ENST00000568820 CPS1P31327 1500 aa14.78□□□□□ -0.04
LYRM1-210ENST00000568820 WASLO00401 505 aaPredicted RBP14.78□□□□□ -0.04
LYRM1-210ENST00000568820 ADAMTS13Q76LX8 1427 aa14.78□□□□□ -0.04
LYRM1-210ENST00000568820 MED14O60244 1454 aa14.78□□□□□ -0.04
LYRM1-210ENST00000568820 ATP7BP35670 1465 aa14.78□□□□□ -0.04
LYRM1-210ENST00000568820 PLEKHH1Q9ULM0 1364 aa14.77□□□□□ -0.04
LYRM1-210ENST00000568820 HOXB3P14651 431 aaPredicted RBP14.77□□□□□ -0.05
LYRM1-210ENST00000568820 LTKP29376 864 aa14.77□□□□□ -0.05
LYRM1-210ENST00000568820 PLPP6Q8IY26 295 aa14.77□□□□□ -0.05
LYRM1-210ENST00000568820 CABP1Q9NZU7 370 aa14.77□□□□□ -0.05
LYRM1-210ENST00000568820 SALL2Q9Y467 1007 aaPredicted RBP14.77□□□□□ -0.05
LYRM1-210ENST00000568820 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.05
LYRM1-210ENST00000568820 CD163L1Q9NR16 1453 aa14.75□□□□□ -0.05
LYRM1-210ENST00000568820 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
LYRM1-210ENST00000568820 TBX22Q9Y458 520 aa14.75□□□□□ -0.05
LYRM1-210ENST00000568820 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
LYRM1-210ENST00000568820 MTHFSP49914 203 aa14.74□□□□□ -0.05
LYRM1-210ENST00000568820 SENP3-EIF4A1A0A087X0R7 540 aa14.74□□□□□ -0.05
LYRM1-210ENST00000568820 DIP2AQ14689 1571 aa14.73□□□□□ -0.05
LYRM1-210ENST00000568820 FYB1O15117 783 aa14.73□□□□□ -0.05
LYRM1-210ENST00000568820 IRX6P78412 446 aaPredicted RBP14.73□□□□□ -0.05
LYRM1-210ENST00000568820 DOK7Q18PE1 504 aa14.73□□□□□ -0.05
LYRM1-210ENST00000568820 RCAN3Q9UKA8 241 aa14.72□□□□□ -0.05
LYRM1-210ENST00000568820 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
LYRM1-210ENST00000568820 ROBO2Q9HCK4 1378 aa14.71□□□□□ -0.05
LYRM1-210ENST00000568820 SLC34A2O95436 690 aa14.71□□□□□ -0.06
LYRM1-210ENST00000568820 NUDT16Q96DE0 195 aaKnown RBP14.71□□□□□ -0.06
LYRM1-210ENST00000568820 GGNBP2Q9H3C7 697 aa14.71□□□□□ -0.06
LYRM1-210ENST00000568820 EDC4Q6P2E9 1401 aaKnown RBP14.7□□□□□ -0.06
LYRM1-210ENST00000568820 ZNF521Q96K83 1311 aa14.7□□□□□ -0.06
LYRM1-210ENST00000568820 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
LYRM1-210ENST00000568820 ADGRB2O60241 1585 aa14.7□□□□□ -0.06
LYRM1-210ENST00000568820 APAF1O14727 1248 aa14.69□□□□□ -0.06
LYRM1-210ENST00000568820 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
LYRM1-210ENST00000568820 RUNDC1Q96C34 613 aa14.69□□□□□ -0.06
LYRM1-210ENST00000568820 CDCA7LQ96GN5 454 aa14.69□□□□□ -0.06
LYRM1-210ENST00000568820 SLC26A8Q96RN1 970 aa14.69□□□□□ -0.06
LYRM1-210ENST00000568820 CEP170BQ9Y4F5 1589 aaPredicted RBP14.69□□□□□ -0.06
LYRM1-210ENST00000568820 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
LYRM1-210ENST00000568820 PTCH1Q13635 1447 aa14.68□□□□□ -0.06
LYRM1-210ENST00000568820 AMOTL2Q9Y2J4 779 aa14.68□□□□□ -0.06
LYRM1-210ENST00000568820 PIK3R4Q99570 1358 aa14.68□□□□□ -0.06
LYRM1-210ENST00000568820 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
LYRM1-210ENST00000568820 WDR70Q9NW82 654 aa14.68□□□□□ -0.06
LYRM1-210ENST00000568820 RIMS1Q86UR5 1692 aaKnown RBP14.67□□□□□ -0.06
LYRM1-210ENST00000568820 RRP1P56182 461 aaKnown RBP14.67□□□□□ -0.06
LYRM1-210ENST00000568820 CAMK2BQ13554 666 aa14.67□□□□□ -0.06
LYRM1-210ENST00000568820 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
LYRM1-210ENST00000568820 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
LYRM1-210ENST00000568820 SHPRHQ149N8 1683 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 E9PSI1 815 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 ZSWIM6Q9HCJ5 1215 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 KIF20BQ96Q89 1820 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 PTPRUQ92729 1446 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 RIMBP2O15034 1052 aa14.65□□□□□ -0.06
LYRM1-210ENST00000568820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.65□□□□□ -0.06
LYRM1-210ENST00000568820 U2AF1L5P0DN76 240 aaPredicted RBP14.64□□□□□ -0.07
LYRM1-210ENST00000568820 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.07
LYRM1-210ENST00000568820 SLFN5Q08AF3 891 aa14.64□□□□□ -0.07
LYRM1-210ENST00000568820 DUSP27Q5VZP5 1158 aa14.64□□□□□ -0.07
LYRM1-210ENST00000568820 PLEKHG3A1L390 1219 aa14.63□□□□□ -0.07
LYRM1-210ENST00000568820 PTCD2Q8WV60 388 aaKnown RBP14.63□□□□□ -0.07
LYRM1-210ENST00000568820 PNPLA6Q8IY17 1366 aa14.62□□□□□ -0.07
LYRM1-210ENST00000568820 DIAPH1O60610 1272 aaKnown RBP14.62□□□□□ -0.07
LYRM1-210ENST00000568820 CCDC27Q2M243 656 aa14.62□□□□□ -0.07
LYRM1-210ENST00000568820 TRMT2AQ8IZ69 625 aaKnown RBP14.62□□□□□ -0.07
LYRM1-210ENST00000568820 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
LYRM1-210ENST00000568820 COG3Q96JB2 828 aa14.62□□□□□ -0.07
LYRM1-210ENST00000568820 ZNF142P52746 1687 aaPredicted RBP14.62□□□□□ -0.07
LYRM1-210ENST00000568820 TCP11L2Q8N4U5 519 aa14.61□□□□□ -0.07
LYRM1-210ENST00000568820 OXER1Q8TDS5 423 aa14.61□□□□□ -0.07
LYRM1-210ENST00000568820 PRR36Q9H6K5 1346 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms