RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 RBM27Q9P2N5 1060 aaKnown RBP30.71■■■□□ 2.51
FANCA-221ENST00000566889 ST18O60284 1047 aa30.7■■■□□ 2.51
FANCA-221ENST00000566889 PRIMPOLQ96LW4 560 aa30.7■■■□□ 2.51
FANCA-221ENST00000566889 TMEM63CQ9P1W3 806 aa30.7■■■□□ 2.51
FANCA-221ENST00000566889 USP26Q9BXU7 913 aa30.7■■■□□ 2.5
FANCA-221ENST00000566889 COL3A1P02461 1466 aaPredicted RBP30.69■■■□□ 2.5
FANCA-221ENST00000566889 PTCH1Q13635 1447 aa30.68■■■□□ 2.5
FANCA-221ENST00000566889 SYCE3A1L190 88 aa30.68■■■□□ 2.5
FANCA-221ENST00000566889 U2SURPO15042 1029 aaKnown RBP30.68■■■□□ 2.5
FANCA-221ENST00000566889 HMGN5P82970 282 aaKnown RBP30.68■■■□□ 2.5
FANCA-221ENST00000566889 PKP1Q13835 747 aa30.68■■■□□ 2.5
FANCA-221ENST00000566889 GSPT1P15170 499 aaKnown RBP30.66■■■□□ 2.5
FANCA-221ENST00000566889 TRAK1Q9UPV9 953 aa30.66■■■□□ 2.5
FANCA-221ENST00000566889 UGGT1Q9NYU2 1555 aa30.66■■■□□ 2.5
FANCA-221ENST00000566889 YEATS2Q9ULM3 1422 aa30.66■■■□□ 2.5
FANCA-221ENST00000566889 INTS3Q68E01 1043 aaKnown RBP30.65■■■□□ 2.5
FANCA-221ENST00000566889 MROH2AA6NES4 1674 aa30.65■■■□□ 2.5
FANCA-221ENST00000566889 PTMAP06454 111 aaKnown RBP30.65■■■□□ 2.5
FANCA-221ENST00000566889 GTF2F1P35269 517 aaKnown RBP eCLIP30.65■■■□□ 2.58e-7■□□□□ 10.3
FANCA-221ENST00000566889 ZDHHC9Q9Y397 364 aa30.65■■■□□ 2.5
FANCA-221ENST00000566889 SIRT2Q8IXJ6 389 aa30.64■■■□□ 2.5
FANCA-221ENST00000566889 ZSCAN20P17040 1043 aaPredicted RBP30.63■■■□□ 2.49
FANCA-221ENST00000566889 PLEKHM2Q8IWE5 1019 aa30.63■■■□□ 2.49
FANCA-221ENST00000566889 GTPBP4Q9BZE4 634 aaKnown RBP30.62■■■□□ 2.49
FANCA-221ENST00000566889 ADGRB1O14514 1584 aa30.62■■■□□ 2.49
FANCA-221ENST00000566889 TTC22Q5TAA0 569 aa30.62■■■□□ 2.49
FANCA-221ENST00000566889 C14orf93Q9H972 538 aaKnown RBP30.62■■■□□ 2.49
FANCA-221ENST00000566889 FANCAO15360 1455 aa30.61■■■□□ 2.49
FANCA-221ENST00000566889 TSPY26PQ9H489 355 aa30.61■■■□□ 2.49
FANCA-221ENST00000566889 SYAP1Q96A49 352 aaPredicted RBP30.61■■■□□ 2.49
FANCA-221ENST00000566889 ARID3AQ99856 593 aa30.61■■■□□ 2.49
FANCA-221ENST00000566889 PRDM10Q9NQV6 1147 aa30.61■■■□□ 2.49
FANCA-221ENST00000566889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.61■■■□□ 2.49
FANCA-221ENST00000566889 EVC2Q86UK5 1308 aa30.6■■■□□ 2.49
FANCA-221ENST00000566889 C1orf115Q9H7X2 142 aa30.6■■■□□ 2.49
FANCA-221ENST00000566889 CASC1Q6TDU7 716 aa30.59■■■□□ 2.49
FANCA-221ENST00000566889 ZGPATQ8N5A5 531 aaKnown RBP30.59■■■□□ 2.49
FANCA-221ENST00000566889 MRPL50Q8N5N7 158 aaKnown RBP30.59■■■□□ 2.49
FANCA-221ENST00000566889 ABCC4O15439 1325 aa30.59■■■□□ 2.49
FANCA-221ENST00000566889 ADGRB3O60242 1522 aa30.59■■■□□ 2.49
FANCA-221ENST00000566889 ZHX1Q9UKY1 873 aaPredicted RBP30.58■■■□□ 2.49
FANCA-221ENST00000566889 DNTTIP2Q5QJE6 756 aaKnown RBP30.58■■■□□ 2.49
FANCA-221ENST00000566889 PIBF1Q8WXW3 757 aa30.58■■■□□ 2.49
FANCA-221ENST00000566889 EFCAB6Q5THR3 1501 aa30.57■■■□□ 2.48
FANCA-221ENST00000566889 UVSSAQ2YD98 709 aa30.56■■■□□ 2.48
FANCA-221ENST00000566889 KIF24Q5T7B8 1368 aa30.56■■■□□ 2.48
FANCA-221ENST00000566889 PHF14O94880 888 aa30.55■■■□□ 2.48
FANCA-221ENST00000566889 KIF20AO95235 890 aa30.55■■■□□ 2.48
FANCA-221ENST00000566889 ARAP3Q8WWN8 1544 aa30.55■■■□□ 2.48
FANCA-221ENST00000566889 FAM184AQ8NB25 1140 aa30.55■■■□□ 2.48
FANCA-221ENST00000566889 NSFL1CQ9UNZ2 370 aaKnown RBP30.55■■■□□ 2.48
FANCA-221ENST00000566889 RNF214Q8ND24 703 aa30.54■■■□□ 2.48
FANCA-221ENST00000566889 DCTPP1Q9H773 170 aa30.54■■■□□ 2.48
FANCA-221ENST00000566889 REC8O95072 547 aa30.53■■■□□ 2.48
FANCA-221ENST00000566889 VAMP4O75379 141 aa30.53■■■□□ 2.48
FANCA-221ENST00000566889 MROH1Q8NDA8 1641 aa30.52■■■□□ 2.48
FANCA-221ENST00000566889 TULP4Q9NRJ4 1543 aa30.52■■■□□ 2.48
FANCA-221ENST00000566889 ZNF710Q8N1W2 664 aa30.51■■■□□ 2.48
FANCA-221ENST00000566889 AFAP1Q8N556 730 aa30.51■■■□□ 2.48
FANCA-221ENST00000566889 ATP7AQ04656 1500 aa30.51■■■□□ 2.48
FANCA-221ENST00000566889 KIF3BO15066 747 aa30.51■■■□□ 2.47
FANCA-221ENST00000566889 NOLC1Q14978 699 aaKnown RBP eCLIP30.5■■■□□ 2.47
FANCA-221ENST00000566889 PPLO60437 1756 aa30.5■■■□□ 2.47
FANCA-221ENST00000566889 DIAPH1O60610 1272 aaKnown RBP30.5■■■□□ 2.47
FANCA-221ENST00000566889 PLEKHG5O94827 1062 aa30.49■■■□□ 2.47
FANCA-221ENST00000566889 LETM1O95202 739 aaPredicted RBP30.49■■■□□ 2.47
FANCA-221ENST00000566889 MCM2P49736 904 aa30.49■■■□□ 2.47
FANCA-221ENST00000566889 API5Q9BZZ5 524 aaKnown RBP30.49■■■□□ 2.47
FANCA-221ENST00000566889 FCHSD2O94868 740 aa30.49■■■□□ 2.47
FANCA-221ENST00000566889 BRD1O95696 1058 aa30.49■■■□□ 2.47
FANCA-221ENST00000566889 KIF3AQ9Y496 699 aa30.49■■■□□ 2.47
FANCA-221ENST00000566889 ANKRD26Q9UPS8 1709 aa30.48■■■□□ 2.47
FANCA-221ENST00000566889 CDC42BPGQ6DT37 1551 aa30.47■■■□□ 2.47
FANCA-221ENST00000566889 SPTLC3Q9NUV7 552 aa30.47■■■□□ 2.47
FANCA-221ENST00000566889 PNPLA6Q8IY17 1366 aa30.47■■■□□ 2.47
FANCA-221ENST00000566889 LMTK2Q8IWU2 1503 aa30.45■■■□□ 2.46
FANCA-221ENST00000566889 A0A0U1RQG5 324 aaPredicted RBP30.44■■■□□ 2.46
FANCA-221ENST00000566889 SDSP20132 328 aa30.44■■■□□ 2.46
FANCA-221ENST00000566889 FKBP5Q13451 457 aaPredicted RBP30.44■■■□□ 2.46
FANCA-221ENST00000566889 RPGRIP1LQ68CZ1 1315 aa30.44■■■□□ 2.46
FANCA-221ENST00000566889 A0A1W2PP64 1363 aa30.44■■■□□ 2.46
FANCA-221ENST00000566889 ERC2O15083 957 aa30.42■■■□□ 2.46
FANCA-221ENST00000566889 PPP4R3BQ5MIZ7 849 aa30.42■■■□□ 2.46
FANCA-221ENST00000566889 GLI2P10070 1586 aa30.42■■■□□ 2.46
FANCA-221ENST00000566889 CBX1P83916 185 aa30.42■■■□□ 2.46
FANCA-221ENST00000566889 TMEM132EQ6IEE7 984 aa30.42■■■□□ 2.46
FANCA-221ENST00000566889 FAM135BQ49AJ0 1406 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 GNAI1P63096 354 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 CUL4AQ13619 759 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 INTS4Q96HW7 963 aaKnown RBP30.41■■■□□ 2.46
FANCA-221ENST00000566889 GGNBP2Q9H3C7 697 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 ARHGEF28Q8N1W1 1705 aaKnown RBP30.41■■■□□ 2.46
FANCA-221ENST00000566889 LRRC7Q96NW7 1537 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 KNDC1Q76NI1 1749 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 TMX3Q96JJ7 454 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 IFT57Q9NWB7 429 aa30.41■■■□□ 2.46
FANCA-221ENST00000566889 KLHL34Q8N239 644 aa30.39■■■□□ 2.46
FANCA-221ENST00000566889 CHAMP1Q96JM3 812 aa30.39■■■□□ 2.46
FANCA-221ENST00000566889 ZFYVE9O95405 1425 aa30.39■■■□□ 2.46
FANCA-221ENST00000566889 ANKRD44Q8N8A2 993 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms