RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
CFDP1-206ENST00000566254 MAST1Q9Y2H9 1570 aa13.69□□□□□ -0.22
CFDP1-206ENST00000566254 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
CFDP1-206ENST00000566254 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
CFDP1-206ENST00000566254 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
CFDP1-206ENST00000566254 C3orf80F5H4A9 247 aa13.68□□□□□ -0.22
CFDP1-206ENST00000566254 TRIM52Q96A61 297 aa13.68□□□□□ -0.22
CFDP1-206ENST00000566254 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
CFDP1-206ENST00000566254 ARHGAP31Q2M1Z3 1444 aa13.67□□□□□ -0.22
CFDP1-206ENST00000566254 PCMTD1Q96MG8 357 aaPredicted RBP13.67□□□□□ -0.22
CFDP1-206ENST00000566254 LRP6O75581 1613 aa13.67□□□□□ -0.22
CFDP1-206ENST00000566254 MSH6P52701 1360 aa13.67□□□□□ -0.22
CFDP1-206ENST00000566254 NUDT18Q6ZVK8 323 aa13.66□□□□□ -0.22
CFDP1-206ENST00000566254 KCNK17Q96T54 332 aa13.66□□□□□ -0.22
CFDP1-206ENST00000566254 RSPH6AQ9H0K4 717 aa13.66□□□□□ -0.22
CFDP1-206ENST00000566254 SLAIN2Q9P270 581 aa13.66□□□□□ -0.22
CFDP1-206ENST00000566254 EFCAB6Q5THR3 1501 aa13.65□□□□□ -0.22
CFDP1-206ENST00000566254 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
CFDP1-206ENST00000566254 LHX8Q68G74 356 aa13.65□□□□□ -0.22
CFDP1-206ENST00000566254 TATDN2Q93075 761 aa13.65□□□□□ -0.22
CFDP1-206ENST00000566254 NKTRP30414 1462 aaKnown RBP13.65□□□□□ -0.22
CFDP1-206ENST00000566254 TET3O43151 1660 aa13.65□□□□□ -0.22
CFDP1-206ENST00000566254 DUOX2Q9NRD8 1548 aa13.64□□□□□ -0.23
CFDP1-206ENST00000566254 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
CFDP1-206ENST00000566254 LOC105371045A0A1W2PR82 267 aa13.64□□□□□ -0.23
CFDP1-206ENST00000566254 IDI1Q13907 227 aa13.64□□□□□ -0.23
CFDP1-206ENST00000566254 MEX3CQ5U5Q3 659 aaKnown RBP13.64□□□□□ -0.23
CFDP1-206ENST00000566254 PACS2Q86VP3 889 aa13.64□□□□□ -0.23
CFDP1-206ENST00000566254 PNMA3Q9UL41 463 aa13.64□□□□□ -0.23
CFDP1-206ENST00000566254 ONECUT3O60422 494 aaPredicted RBP13.63□□□□□ -0.23
CFDP1-206ENST00000566254 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
CFDP1-206ENST00000566254 PROX2Q3B8N5 592 aa13.63□□□□□ -0.23
CFDP1-206ENST00000566254 ZNF772Q68DY9 489 aaPredicted RBP13.63□□□□□ -0.23
CFDP1-206ENST00000566254 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
CFDP1-206ENST00000566254 SPATA31A6Q5VVP1 1343 aa13.62□□□□□ -0.23
CFDP1-206ENST00000566254 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
CFDP1-206ENST00000566254 DNAJB2P25686 324 aa13.61□□□□□ -0.23
CFDP1-206ENST00000566254 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
CFDP1-206ENST00000566254 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
CFDP1-206ENST00000566254 ERBINQ96RT1 1412 aa13.59□□□□□ -0.23
CFDP1-206ENST00000566254 RXRBP28702 533 aa13.59□□□□□ -0.23
CFDP1-206ENST00000566254 ZBED2Q9BTP6 218 aa13.59□□□□□ -0.23
CFDP1-206ENST00000566254 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
CFDP1-206ENST00000566254 ERBB3P21860 1342 aa13.59□□□□□ -0.23
CFDP1-206ENST00000566254 PSEN2P49810 448 aa13.58□□□□□ -0.24
CFDP1-206ENST00000566254 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
CFDP1-206ENST00000566254 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
CFDP1-206ENST00000566254 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
CFDP1-206ENST00000566254 SMAPO00193 183 aa13.57□□□□□ -0.24
CFDP1-206ENST00000566254 CD46P15529 392 aa13.57□□□□□ -0.24
CFDP1-206ENST00000566254 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
CFDP1-206ENST00000566254 ADGRB3O60242 1522 aa13.57□□□□□ -0.24
CFDP1-206ENST00000566254 KANK1Q14678 1352 aa13.57□□□□□ -0.24
CFDP1-206ENST00000566254 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
CFDP1-206ENST00000566254 SULF1Q8IWU6 871 aa13.56□□□□□ -0.24
CFDP1-206ENST00000566254 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
CFDP1-206ENST00000566254 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
CFDP1-206ENST00000566254 KIAA1468Q9P260 1216 aa13.56□□□□□ -0.24
CFDP1-206ENST00000566254 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
CFDP1-206ENST00000566254 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
CFDP1-206ENST00000566254 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
CFDP1-206ENST00000566254 ST18O60284 1047 aa13.55□□□□□ -0.24
CFDP1-206ENST00000566254 KANK4Q5T7N3 995 aaPredicted RBP13.55□□□□□ -0.24
CFDP1-206ENST00000566254 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
CFDP1-206ENST00000566254 PROCA1Q8NCQ7 364 aaPredicted RBP13.55□□□□□ -0.24
CFDP1-206ENST00000566254 NOS1P29475 1434 aa13.55□□□□□ -0.24
CFDP1-206ENST00000566254 FLIIQ13045 1269 aa13.54□□□□□ -0.24
CFDP1-206ENST00000566254 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
CFDP1-206ENST00000566254 ZMYND15Q9H091 742 aa13.54□□□□□ -0.24
CFDP1-206ENST00000566254 ABCC5O15440 1437 aa13.54□□□□□ -0.24
CFDP1-206ENST00000566254 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
CFDP1-206ENST00000566254 LMTK2Q8IWU2 1503 aa13.54□□□□□ -0.24
CFDP1-206ENST00000566254 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
CFDP1-206ENST00000566254 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
CFDP1-206ENST00000566254 DDX11L8A8MPP1 907 aa13.53□□□□□ -0.24
CFDP1-206ENST00000566254 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
CFDP1-206ENST00000566254 PPP1R15AO75807 674 aaPredicted RBP13.52□□□□□ -0.25
CFDP1-206ENST00000566254 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.25
CFDP1-206ENST00000566254 SLC4A5Q9BY07 1137 aa13.52□□□□□ -0.25
CFDP1-206ENST00000566254 AFF2P51816 1311 aa13.52□□□□□ -0.25
CFDP1-206ENST00000566254 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
CFDP1-206ENST00000566254 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
CFDP1-206ENST00000566254 CROCC2H7BZ55 1655 aa13.51□□□□□ -0.25
CFDP1-206ENST00000566254 CLK2P49760 499 aaKnown RBP13.51□□□□□ -0.25
CFDP1-206ENST00000566254 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
CFDP1-206ENST00000566254 SLC52A1Q9NWF4 448 aa13.51□□□□□ -0.25
CFDP1-206ENST00000566254 RABGEF1Q9UJ41 708 aa13.51□□□□□ -0.25
CFDP1-206ENST00000566254 SRCAPQ6ZRS2 3230 aa13.51□□□□□ -0.25
CFDP1-206ENST00000566254 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 RGS12O14924 1447 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 NCOA3Q9Y6Q9 1424 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 ATF3P18847 181 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 EMP3P54852 163 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 DMRTA1Q5VZB9 504 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
CFDP1-206ENST00000566254 VPS8Q8N3P4 1428 aa13.49□□□□□ -0.25
CFDP1-206ENST00000566254 MARVELD3Q96A59 401 aa13.49□□□□□ -0.25
CFDP1-206ENST00000566254 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms