RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 TRMT2AQ8IZ69 625 aaKnown RBP25.33■■□□□ 1.65
PKD1-230ENST00000565639 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
PKD1-230ENST00000565639 RRP7AQ9Y3A4 280 aaKnown RBP25.33■■□□□ 1.65
PKD1-230ENST00000565639 RGPD1P0DJD0 1748 aa25.33■■□□□ 1.65
PKD1-230ENST00000565639 TMPOP42166 694 aaKnown RBP25.33■■□□□ 1.64
PKD1-230ENST00000565639 E9PSI1 815 aa25.32■■□□□ 1.64
PKD1-230ENST00000565639 NEUROD2Q15784 382 aa25.32■■□□□ 1.64
PKD1-230ENST00000565639 DUSP27Q5VZP5 1158 aa25.32■■□□□ 1.64
PKD1-230ENST00000565639 BRINP3Q76B58 766 aa25.32■■□□□ 1.64
PKD1-230ENST00000565639 WDR63Q8IWG1 891 aa25.32■■□□□ 1.64
PKD1-230ENST00000565639 HMOX1P09601 288 aa25.31■■□□□ 1.64
PKD1-230ENST00000565639 HOXC9P31274 260 aa25.31■■□□□ 1.64
PKD1-230ENST00000565639 PXDNQ92626 1479 aa25.31■■□□□ 1.64
PKD1-230ENST00000565639 PHRF1Q9P1Y6 1649 aaKnown RBP25.31■■□□□ 1.64
PKD1-230ENST00000565639 LTN1O94822 1766 aa25.3■■□□□ 1.64
PKD1-230ENST00000565639 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
PKD1-230ENST00000565639 ARHGEF10O15013 1369 aa25.29■■□□□ 1.64
PKD1-230ENST00000565639 GCP02774 474 aa25.29■■□□□ 1.64
PKD1-230ENST00000565639 FKBP8Q14318 412 aa25.29■■□□□ 1.64
PKD1-230ENST00000565639 LMOD2Q6P5Q4 547 aa25.29■■□□□ 1.64
PKD1-230ENST00000565639 TNS3Q68CZ2 1445 aa25.28■■□□□ 1.64
PKD1-230ENST00000565639 IP6K1Q92551 441 aa25.27■■□□□ 1.64
PKD1-230ENST00000565639 DDX17Q92841 729 aaKnown RBP25.27■■□□□ 1.64
PKD1-230ENST00000565639 RCAN3Q9UKA8 241 aa25.27■■□□□ 1.64
PKD1-230ENST00000565639 SPINK5Q9NQ38 1064 aaPredicted RBP25.26■■□□□ 1.63
PKD1-230ENST00000565639 RIPK4P57078 832 aa25.25■■□□□ 1.63
PKD1-230ENST00000565639 SULT6B1Q6IMI4 303 aa25.25■■□□□ 1.63
PKD1-230ENST00000565639 SPATA31A3Q5VYP0 1347 aa25.25■■□□□ 1.63
PKD1-230ENST00000565639 NFE2L2Q16236 605 aa25.24■■□□□ 1.63
PKD1-230ENST00000565639 PHACTR3Q96KR7 559 aa25.24■■□□□ 1.63
PKD1-230ENST00000565639 TRIM35Q9UPQ4 493 aa25.24■■□□□ 1.63
PKD1-230ENST00000565639 LTBP4Q8N2S1 1624 aa25.24■■□□□ 1.63
PKD1-230ENST00000565639 IGSF1Q8N6C5 1336 aa25.24■■□□□ 1.63
PKD1-230ENST00000565639 ARHGEF25Q86VW2 580 aa25.24■■□□□ 1.63
PKD1-230ENST00000565639 KDRP35968 1356 aa25.23■■□□□ 1.63
PKD1-230ENST00000565639 MED1Q15648 1581 aaPredicted RBP25.23■■□□□ 1.63
PKD1-230ENST00000565639 AEBP1Q8IUX7 1158 aa25.22■■□□□ 1.63
PKD1-230ENST00000565639 SOS2Q07890 1332 aaPredicted RBP25.21■■□□□ 1.63
PKD1-230ENST00000565639 EYA1Q99502 592 aa25.21■■□□□ 1.63
PKD1-230ENST00000565639 ERICH6BQ5W0A0 696 aa25.2■■□□□ 1.63
PKD1-230ENST00000565639 IL16Q14005 1332 aa25.2■■□□□ 1.63
PKD1-230ENST00000565639 MYH16Q9H6N6 1097 aa25.18■■□□□ 1.62
PKD1-230ENST00000565639 NHSL1Q5SYE7 1610 aa25.17■■□□□ 1.62
PKD1-230ENST00000565639 LMOD3Q0VAK6 560 aa25.16■■□□□ 1.62
PKD1-230ENST00000565639 CRYBG1Q9Y4K1 1723 aa25.16■■□□□ 1.62
PKD1-230ENST00000565639 RRP1P56182 461 aaKnown RBP25.14■■□□□ 1.61
PKD1-230ENST00000565639 CALD1Q05682 793 aaKnown RBP25.13■■□□□ 1.61
PKD1-230ENST00000565639 LTV1Q96GA3 475 aaPredicted RBP25.13■■□□□ 1.61
PKD1-230ENST00000565639 DLG5Q8TDM6 1919 aa25.12■■□□□ 1.61
PKD1-230ENST00000565639 ZBTB7CA1YPR0 619 aa25.12■■□□□ 1.61
PKD1-230ENST00000565639 IRX6P78412 446 aaPredicted RBP25.12■■□□□ 1.61
PKD1-230ENST00000565639 ABCC6O95255 1503 aa25.11■■□□□ 1.61
PKD1-230ENST00000565639 PLEKHG5O94827 1062 aa25.11■■□□□ 1.61
PKD1-230ENST00000565639 CPDO75976 1380 aa25.09■■□□□ 1.61
PKD1-230ENST00000565639 ZC3H6P61129 1189 aaKnown RBP25.09■■□□□ 1.61
PKD1-230ENST00000565639 FANCIQ9NVI1 1328 aa25.07■■□□□ 1.6
PKD1-230ENST00000565639 NCAPD2Q15021 1401 aa25.07■■□□□ 1.6
PKD1-230ENST00000565639 NBPF6Q5VWK0 638 aa25.07■■□□□ 1.6
PKD1-230ENST00000565639 CABLES1Q8TDN4 633 aa25.07■■□□□ 1.6
PKD1-230ENST00000565639 NBPF4Q96M43 638 aa25.07■■□□□ 1.6
PKD1-230ENST00000565639 GAS2L2Q8NHY3 880 aa25.06■■□□□ 1.6
PKD1-230ENST00000565639 ANKRD24Q8TF21 1146 aa25.06■■□□□ 1.6
PKD1-230ENST00000565639 AXIN2Q9Y2T1 843 aa25.06■■□□□ 1.6
PKD1-230ENST00000565639 COL18A1P39060 1754 aa25.06■■□□□ 1.6
PKD1-230ENST00000565639 CT47B1P0C2W7 299 aaPredicted RBP25.05■■□□□ 1.6
PKD1-230ENST00000565639 ROBO1Q9Y6N7 1651 aa25.05■■□□□ 1.6
PKD1-230ENST00000565639 CAMTA1Q9Y6Y1 1673 aa25.05■■□□□ 1.6
PKD1-230ENST00000565639 MTHFSDQ2M296 383 aaKnown RBP25.04■■□□□ 1.6
PKD1-230ENST00000565639 GNAI1P63096 354 aa25.04■■□□□ 1.6
PKD1-230ENST00000565639 IFT57Q9NWB7 429 aa25.04■■□□□ 1.6
PKD1-230ENST00000565639 ERBB3P21860 1342 aa25.03■■□□□ 1.6
PKD1-230ENST00000565639 AHDC1Q5TGY3 1603 aaPredicted RBP25.03■■□□□ 1.6
PKD1-230ENST00000565639 TSR2Q969E8 191 aaKnown RBP25.02■■□□□ 1.6
PKD1-230ENST00000565639 RGPD5Q99666 1765 aa25.02■■□□□ 1.6
PKD1-230ENST00000565639 RGPD2P0DJD1 1756 aa25.02■■□□□ 1.6
PKD1-230ENST00000565639 ZNF853P0CG23 659 aa25.02■■□□□ 1.6
PKD1-230ENST00000565639 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.02■■□□□ 1.6
PKD1-230ENST00000565639 KIAA0232Q92628 1395 aa25.01■■□□□ 1.59
PKD1-230ENST00000565639 HTATSF1O43719 755 aaKnown RBP25.01■■□□□ 1.59
PKD1-230ENST00000565639 USHBP1Q8N6Y0 703 aa25.01■■□□□ 1.59
PKD1-230ENST00000565639 LRRC59Q96AG4 307 aaKnown RBP25.01■■□□□ 1.59
PKD1-230ENST00000565639 THUMPD2Q9BTF0 503 aaKnown RBP25.01■■□□□ 1.59
PKD1-230ENST00000565639 FAM83GA6ND36 823 aa25■■□□□ 1.59
PKD1-230ENST00000565639 ABCA3Q99758 1704 aa25■■□□□ 1.59
PKD1-230ENST00000565639 CFAP44Q96MT7 982 aa25■■□□□ 1.59
PKD1-230ENST00000565639 LMO7Q8WWI1 1683 aa24.99■■□□□ 1.59
PKD1-230ENST00000565639 EXOSC9Q06265 439 aaKnown RBP24.98■■□□□ 1.59
PKD1-230ENST00000565639 PPP4R2Q9NY27 417 aa24.98■■□□□ 1.59
PKD1-230ENST00000565639 FAM208AQ9UK61 1670 aaKnown RBP24.97■■□□□ 1.59
PKD1-230ENST00000565639 RARSP54136 660 aaKnown RBP24.97■■□□□ 1.59
PKD1-230ENST00000565639 DCTN1Q14203 1278 aa24.96■■□□□ 1.59
PKD1-230ENST00000565639 RTF1Q92541 710 aaKnown RBP24.96■■□□□ 1.59
PKD1-230ENST00000565639 PLIN1O60240 522 aa24.95■■□□□ 1.58
PKD1-230ENST00000565639 LAS1LQ9Y4W2 734 aaKnown RBP24.95■■□□□ 1.58
PKD1-230ENST00000565639 GNAT3A8MTJ3 354 aa24.94■■□□□ 1.58
PKD1-230ENST00000565639 BCAR3O75815 825 aa24.94■■□□□ 1.58
PKD1-230ENST00000565639 HAP1P54257 671 aaPredicted RBP24.94■■□□□ 1.58
PKD1-230ENST00000565639 CHRNA2Q15822 529 aa24.94■■□□□ 1.58
PKD1-230ENST00000565639 MCM10Q7L590 875 aa24.94■■□□□ 1.58
PKD1-230ENST00000565639 PRDM11Q9NQV5 511 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms