RNA–Protein interactions for RNA: ENST00000565256.1

SNHG20-203, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 1,234 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-203ENST00000565256 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
SNHG20-203ENST00000565256 SLIT2O94813 1529 aa17.79■□□□□ 0.44
SNHG20-203ENST00000565256 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
SNHG20-203ENST00000565256 SMG6Q86US8 1419 aaKnown RBP17.78■□□□□ 0.44
SNHG20-203ENST00000565256 INSRP06213 1382 aa17.78■□□□□ 0.44
SNHG20-203ENST00000565256 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.44
SNHG20-203ENST00000565256 COL3A1P02461 1466 aaPredicted RBP17.76■□□□□ 0.43
SNHG20-203ENST00000565256 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNHG20-203ENST00000565256 ADAMTS8Q9UP79 889 aa17.76■□□□□ 0.43
SNHG20-203ENST00000565256 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
SNHG20-203ENST00000565256 SOX12O15370 315 aa17.75■□□□□ 0.43
SNHG20-203ENST00000565256 LMOD2Q6P5Q4 547 aa17.75■□□□□ 0.43
SNHG20-203ENST00000565256 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
SNHG20-203ENST00000565256 BRWD3Q6RI45 1802 aa17.75■□□□□ 0.43
SNHG20-203ENST00000565256 SPATA31A3Q5VYP0 1347 aa17.74■□□□□ 0.43
SNHG20-203ENST00000565256 PEAK1Q9H792 1746 aa17.74■□□□□ 0.43
SNHG20-203ENST00000565256 TNS3Q68CZ2 1445 aa17.73■□□□□ 0.43
SNHG20-203ENST00000565256 HNRNPUQ00839 825 aaKnown RBP eCLIP17.73■□□□□ 0.43
SNHG20-203ENST00000565256 USP19O94966 1318 aa17.72■□□□□ 0.43
SNHG20-203ENST00000565256 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
SNHG20-203ENST00000565256 SLIT3O75094 1523 aa17.72■□□□□ 0.43
SNHG20-203ENST00000565256 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
SNHG20-203ENST00000565256 NFAT5O94916 1531 aa17.72■□□□□ 0.43
SNHG20-203ENST00000565256 KCNH5Q8NCM2 988 aa17.71■□□□□ 0.43
SNHG20-203ENST00000565256 GCP02774 474 aa17.7■□□□□ 0.42
SNHG20-203ENST00000565256 SEPT12Q8IYM1 358 aa17.7■□□□□ 0.42
SNHG20-203ENST00000565256 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
SNHG20-203ENST00000565256 LTN1O94822 1766 aa17.7■□□□□ 0.42
SNHG20-203ENST00000565256 ARHGEF10O15013 1369 aa17.69■□□□□ 0.42
SNHG20-203ENST00000565256 PSDA5PKW4 1024 aaPredicted RBP17.69■□□□□ 0.42
SNHG20-203ENST00000565256 IL13P35225 146 aa17.68■□□□□ 0.42
SNHG20-203ENST00000565256 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
SNHG20-203ENST00000565256 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
SNHG20-203ENST00000565256 ONECUT3O60422 494 aaPredicted RBP17.67■□□□□ 0.42
SNHG20-203ENST00000565256 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
SNHG20-203ENST00000565256 AMPHP49418 695 aa17.67■□□□□ 0.42
SNHG20-203ENST00000565256 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
SNHG20-203ENST00000565256 PHRF1Q9P1Y6 1649 aaKnown RBP17.67■□□□□ 0.42
SNHG20-203ENST00000565256 FLT4P35916 1363 aa17.66■□□□□ 0.42
SNHG20-203ENST00000565256 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
SNHG20-203ENST00000565256 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
SNHG20-203ENST00000565256 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNHG20-203ENST00000565256 VPS72Q15906 364 aa17.66■□□□□ 0.42
SNHG20-203ENST00000565256 HOXC9P31274 260 aa17.65■□□□□ 0.42
SNHG20-203ENST00000565256 SF3B2Q13435 895 aaKnown RBP17.65■□□□□ 0.42
SNHG20-203ENST00000565256 EIF4A2Q14240 407 aaKnown RBP17.65■□□□□ 0.42
SNHG20-203ENST00000565256 ARHGEF25Q86VW2 580 aa17.65■□□□□ 0.42
SNHG20-203ENST00000565256 CENPBP07199 599 aaPredicted RBP17.64■□□□□ 0.41
SNHG20-203ENST00000565256 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.41
SNHG20-203ENST00000565256 CABLES1Q8TDN4 633 aa17.64■□□□□ 0.41
SNHG20-203ENST00000565256 IP6K1Q92551 441 aa17.64■□□□□ 0.41
SNHG20-203ENST00000565256 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.41
SNHG20-203ENST00000565256 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
SNHG20-203ENST00000565256 KRT27Q7Z3Y8 459 aa17.63■□□□□ 0.41
SNHG20-203ENST00000565256 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
SNHG20-203ENST00000565256 RTL1A6NKG5 1358 aa17.63■□□□□ 0.41
SNHG20-203ENST00000565256 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
SNHG20-203ENST00000565256 RUNDC1Q96C34 613 aa17.61■□□□□ 0.41
SNHG20-203ENST00000565256 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
SNHG20-203ENST00000565256 FCHSD2O94868 740 aa17.6■□□□□ 0.41
SNHG20-203ENST00000565256 ZC3H6P61129 1189 aaKnown RBP17.6■□□□□ 0.41
SNHG20-203ENST00000565256 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
SNHG20-203ENST00000565256 NWD2Q9ULI1 1742 aa17.6■□□□□ 0.41
SNHG20-203ENST00000565256 COL18A1P39060 1754 aa17.59■□□□□ 0.41
SNHG20-203ENST00000565256 RGPD5Q99666 1765 aa17.59■□□□□ 0.41
SNHG20-203ENST00000565256 PLEKHF1Q96S99 279 aa17.59■□□□□ 0.41
SNHG20-203ENST00000565256 APAF1O14727 1248 aa17.58■□□□□ 0.4
SNHG20-203ENST00000565256 BAG6P46379 1132 aa17.58■□□□□ 0.4
SNHG20-203ENST00000565256 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
SNHG20-203ENST00000565256 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
SNHG20-203ENST00000565256 SALL2Q9Y467 1007 aaPredicted RBP17.58■□□□□ 0.4
SNHG20-203ENST00000565256 HMOX1P09601 288 aa17.57■□□□□ 0.4
SNHG20-203ENST00000565256 CPDO75976 1380 aa17.56■□□□□ 0.4
SNHG20-203ENST00000565256 NRAPQ86VF7 1730 aa17.56■□□□□ 0.4
SNHG20-203ENST00000565256 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
SNHG20-203ENST00000565256 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
SNHG20-203ENST00000565256 LTV1Q96GA3 475 aaPredicted RBP17.56■□□□□ 0.4
SNHG20-203ENST00000565256 EYA1Q99502 592 aa17.56■□□□□ 0.4
SNHG20-203ENST00000565256 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
SNHG20-203ENST00000565256 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
SNHG20-203ENST00000565256 KIAA0232Q92628 1395 aa17.55■□□□□ 0.4
SNHG20-203ENST00000565256 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
SNHG20-203ENST00000565256 R3HDM1Q15032 1099 aaKnown RBP17.55■□□□□ 0.4
SNHG20-203ENST00000565256 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
SNHG20-203ENST00000565256 RGPD2P0DJD1 1756 aa17.54■□□□□ 0.4
SNHG20-203ENST00000565256 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
SNHG20-203ENST00000565256 AEBP1Q8IUX7 1158 aa17.54■□□□□ 0.4
SNHG20-203ENST00000565256 NGEFQ8N5V2 710 aa17.54■□□□□ 0.4
SNHG20-203ENST00000565256 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
SNHG20-203ENST00000565256 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
SNHG20-203ENST00000565256 ABCC6O95255 1503 aa17.53■□□□□ 0.4
SNHG20-203ENST00000565256 HAP1P54257 671 aaPredicted RBP17.53■□□□□ 0.4
SNHG20-203ENST00000565256 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
SNHG20-203ENST00000565256 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
SNHG20-203ENST00000565256 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
SNHG20-203ENST00000565256 CHRNA2Q15822 529 aa17.52■□□□□ 0.4
SNHG20-203ENST00000565256 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
SNHG20-203ENST00000565256 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.39
SNHG20-203ENST00000565256 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SNHG20-203ENST00000565256 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms