RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 SOX11P35716 441 aa8.83□□□□□ -1
CHD9-210ENST00000564582 VAC14Q08AM6 782 aa8.83□□□□□ -1
CHD9-210ENST00000564582 Q6ZNB5 142 aa8.83□□□□□ -1
CHD9-210ENST00000564582 TRIM52Q96A61 297 aa8.83□□□□□ -1
CHD9-210ENST00000564582 CLUAP1Q96AJ1 413 aa8.83□□□□□ -1
CHD9-210ENST00000564582 A6NJR5 290 aa8.82□□□□□ -1
CHD9-210ENST00000564582 ZEB1P37275 1124 aaPredicted RBP8.82□□□□□ -1
CHD9-210ENST00000564582 NNTQ13423 1086 aa8.82□□□□□ -1
CHD9-210ENST00000564582 PROSER2Q86WR7 435 aaPredicted RBP8.82□□□□□ -1
CHD9-210ENST00000564582 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
CHD9-210ENST00000564582 DHX9Q08211 1270 aaKnown RBP8.81□□□□□ -1
CHD9-210ENST00000564582 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
CHD9-210ENST00000564582 CCDC125Q86Z20 511 aa8.81□□□□□ -1
CHD9-210ENST00000564582 SEMA3FQ13275 785 aa8.8□□□□□ -1
CHD9-210ENST00000564582 CTC1Q2NKJ3 1217 aa8.8□□□□□ -1
CHD9-210ENST00000564582 RNF20Q5VTR2 975 aa8.8□□□□□ -1
CHD9-210ENST00000564582 AVPP01185 164 aa8.79□□□□□ -1
CHD9-210ENST00000564582 GRM5P41594 1212 aa8.79□□□□□ -1
CHD9-210ENST00000564582 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
CHD9-210ENST00000564582 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
CHD9-210ENST00000564582 HPS1Q92902 700 aa8.78□□□□□ -1
CHD9-210ENST00000564582 EMILIN1Q9Y6C2 1016 aa8.78□□□□□ -1
CHD9-210ENST00000564582 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
CHD9-210ENST00000564582 ESPNB1AK53 854 aa8.76□□□□□ -1.01
CHD9-210ENST00000564582 INTS6LQ5JSJ4 861 aaKnown RBP8.76□□□□□ -1.01
CHD9-210ENST00000564582 AXIN1O15169 862 aa8.75□□□□□ -1.01
CHD9-210ENST00000564582 NR3C2P08235 984 aa8.75□□□□□ -1.01
CHD9-210ENST00000564582 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
CHD9-210ENST00000564582 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
CHD9-210ENST00000564582 RAB15P59190 212 aa8.75□□□□□ -1.01
CHD9-210ENST00000564582 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
CHD9-210ENST00000564582 C14orf37Q86TY3 774 aa8.75□□□□□ -1.01
CHD9-210ENST00000564582 CRIPAKQ8N1N5 446 aa8.75□□□□□ -1.01
CHD9-210ENST00000564582 FNBP4Q8N3X1 1017 aaPredicted RBP8.75□□□□□ -1.01
CHD9-210ENST00000564582 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
CHD9-210ENST00000564582 CAPN5O15484 640 aaPredicted RBP8.74□□□□□ -1.01
CHD9-210ENST00000564582 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
CHD9-210ENST00000564582 PPP1R26Q5T8A7 1209 aaPredicted RBP8.74□□□□□ -1.01
CHD9-210ENST00000564582 TRAF7Q6Q0C0 670 aa8.74□□□□□ -1.01
CHD9-210ENST00000564582 CEP126Q9P2H0 1117 aa8.74□□□□□ -1.01
CHD9-210ENST00000564582 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
CHD9-210ENST00000564582 TIMP2P16035 220 aa8.72□□□□□ -1.01
CHD9-210ENST00000564582 ERVH48-1M5A8F1 160 aa8.71□□□□□ -1.02
CHD9-210ENST00000564582 TRAK2O60296 914 aa8.71□□□□□ -1.02
CHD9-210ENST00000564582 RNF135Q8IUD6 432 aa8.71□□□□□ -1.02
CHD9-210ENST00000564582 ITPKCQ96DU7 683 aa8.71□□□□□ -1.02
CHD9-210ENST00000564582 ESF1Q9H501 851 aaKnown RBP8.71□□□□□ -1.02
CHD9-210ENST00000564582 ALG2Q9H553 416 aa8.71□□□□□ -1.02
CHD9-210ENST00000564582 POM121CA8CG34 1229 aa8.7□□□□□ -1.02
CHD9-210ENST00000564582 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
CHD9-210ENST00000564582 AAASQ9NRG9 546 aa8.7□□□□□ -1.02
CHD9-210ENST00000564582 UPP2O95045 317 aa8.69□□□□□ -1.02
CHD9-210ENST00000564582 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
CHD9-210ENST00000564582 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
CHD9-210ENST00000564582 ST8SIA5O15466 376 aa8.68□□□□□ -1.02
CHD9-210ENST00000564582 GLMNQ92990 594 aa8.68□□□□□ -1.02
CHD9-210ENST00000564582 CALR3Q96L12 384 aaKnown RBP8.68□□□□□ -1.02
CHD9-210ENST00000564582 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
CHD9-210ENST00000564582 TMPRSS4Q9NRS4 437 aa8.68□□□□□ -1.02
CHD9-210ENST00000564582 DOLKQ9UPQ8 538 aa8.68□□□□□ -1.02
CHD9-210ENST00000564582 MAP7D1Q3KQU3 841 aa8.67□□□□□ -1.02
CHD9-210ENST00000564582 ZNF784Q8NCA9 323 aaPredicted RBP8.67□□□□□ -1.02
CHD9-210ENST00000564582 MYCP01106 439 aaPredicted RBP8.66□□□□□ -1.02
CHD9-210ENST00000564582 SCARF1Q14162 830 aa8.66□□□□□ -1.02
CHD9-210ENST00000564582 CC2D2BQ6DHV5 1058 aa8.66□□□□□ -1.02
CHD9-210ENST00000564582 PHTF2Q8N3S3 785 aa8.66□□□□□ -1.02
CHD9-210ENST00000564582 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
CHD9-210ENST00000564582 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
CHD9-210ENST00000564582 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
CHD9-210ENST00000564582 Q6ZVU0 165 aa8.65□□□□□ -1.02
CHD9-210ENST00000564582 MEIOBQ8N635 442 aa8.65□□□□□ -1.02
CHD9-210ENST00000564582 ZNF777Q9ULD5 760 aaPredicted RBP8.65□□□□□ -1.02
CHD9-210ENST00000564582 SKIP12755 728 aa8.64□□□□□ -1.03
CHD9-210ENST00000564582 ERVK-9P63128 1117 aa8.64□□□□□ -1.03
CHD9-210ENST00000564582 USP4Q13107 963 aa8.64□□□□□ -1.03
CHD9-210ENST00000564582 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
CHD9-210ENST00000564582 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
CHD9-210ENST00000564582 ADAMTS19Q8TE59 1207 aa8.64□□□□□ -1.03
CHD9-210ENST00000564582 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
CHD9-210ENST00000564582 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
CHD9-210ENST00000564582 ATP13A2Q9NQ11 1180 aa8.64□□□□□ -1.03
CHD9-210ENST00000564582 DCAF1Q9Y4B6 1507 aa8.64□□□□□ -1.03
CHD9-210ENST00000564582 LZTS3O60299 673 aaPredicted RBP8.63□□□□□ -1.03
CHD9-210ENST00000564582 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
CHD9-210ENST00000564582 SENP2Q9HC62 589 aa8.63□□□□□ -1.03
CHD9-210ENST00000564582 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
CHD9-210ENST00000564582 LILRA1O75019 489 aa8.62□□□□□ -1.03
CHD9-210ENST00000564582 ADH1AP07327 375 aa8.62□□□□□ -1.03
CHD9-210ENST00000564582 BMP1P13497 986 aa8.62□□□□□ -1.03
CHD9-210ENST00000564582 CBLBQ13191 982 aa8.62□□□□□ -1.03
CHD9-210ENST00000564582 OXLD1Q5BKU9 147 aa8.62□□□□□ -1.03
CHD9-210ENST00000564582 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
CHD9-210ENST00000564582 KIFC2Q96AC6 838 aa8.62□□□□□ -1.03
CHD9-210ENST00000564582 PIK3CDO00329 1044 aa8.61□□□□□ -1.03
CHD9-210ENST00000564582 LCE2BO14633 110 aa8.61□□□□□ -1.03
CHD9-210ENST00000564582 BMP2P12643 396 aa8.61□□□□□ -1.03
CHD9-210ENST00000564582 EML3Q32P44 896 aa8.61□□□□□ -1.03
CHD9-210ENST00000564582 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
CHD9-210ENST00000564582 ATP9BO43861 1147 aa8.6□□□□□ -1.03
CHD9-210ENST00000564582 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms