RNA–Protein interactions for RNA: ENST00000563350.1

ITFG1-205, Transcript of integrin alpha FG-GAP repeat containing 1, human

TSL 3

Gene ITFG1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITFG1-205	ENST00000563350	USP17L21	D6R901	530 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	USP17L18	D6R9N7	530 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	USP17L22	D6RA61	530 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	USP17L17	D6RBQ6	530 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	USP17L19	D6RCP7	530 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	USP17L20	D6RJB6	530 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	USP17L24	Q0WX57	530 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	DEPDC4	Q8N2C3	294 aa		10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	CCER1	Q8TC90	406 aa	Predicted RBP	10.23	□□□□□ -0.77
ITFG1-205	ENST00000563350	MMP16	P51512	607 aa		10.22	□□□□□ -0.77
ITFG1-205	ENST00000563350	TXNDC2	Q86VQ3	553 aa		10.22	□□□□□ -0.77
ITFG1-205	ENST00000563350	ZNF592	Q92610	1267 aa		10.22	□□□□□ -0.77
ITFG1-205	ENST00000563350	PRKD2	Q9BZL6	878 aa		10.22	□□□□□ -0.77
ITFG1-205	ENST00000563350	CTH	P32929	405 aa		10.21	□□□□□ -0.77
ITFG1-205	ENST00000563350	CRTC2	Q53ET0	693 aa	Predicted RBP	10.21	□□□□□ -0.77
ITFG1-205	ENST00000563350	MKRN1	Q9UHC7	482 aa	Known RBP	10.21	□□□□□ -0.77
ITFG1-205	ENST00000563350	FCF1	Q9Y324	198 aa	Known RBP	10.21	□□□□□ -0.77
ITFG1-205	ENST00000563350		V9GY48	417 aa	Predicted RBP	10.21	□□□□□ -0.77
ITFG1-205	ENST00000563350	DXO	O77932	396 aa	Known RBP	10.2	□□□□□ -0.78
ITFG1-205	ENST00000563350	SLFNL1	Q499Z3	407 aa		10.2	□□□□□ -0.78
ITFG1-205	ENST00000563350	PHLDB3	Q6NSJ2	640 aa		10.2	□□□□□ -0.78
ITFG1-205	ENST00000563350	GPSM3	Q9Y4H4	160 aa		10.2	□□□□□ -0.78
ITFG1-205	ENST00000563350	NCOA4	Q13772	614 aa		10.19	□□□□□ -0.78
ITFG1-205	ENST00000563350	LARP1	Q6PKG0	1096 aa	Known RBP	10.19	□□□□□ -0.78
ITFG1-205	ENST00000563350	CEP126	Q9P2H0	1117 aa		10.19	□□□□□ -0.78
ITFG1-205	ENST00000563350	ATP5J2-PTCD1	G3V325	749 aa		10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	MCCD1	P59942	119 aa	Predicted RBP	10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	PTK2	Q05397	1052 aa		10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	PTK7	Q13308	1070 aa		10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	PLA2G2C	Q5R387	149 aa		10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	RNF135	Q8IUD6	432 aa		10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	PCDHB9	Q9Y5E1	797 aa		10.18	□□□□□ -0.78
ITFG1-205	ENST00000563350	CCNYL3	P0C7X3	344 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	RASA1	P20936	1047 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	SSFA2	P28290	1259 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	SLC19A1	P41440	591 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	PDXDC2P	Q6P474	469 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	PLPP7	Q8NBV4	271 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	ARMC2	Q8NEN0	867 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	FAM200A	Q8TCP9	573 aa		10.17	□□□□□ -0.78
ITFG1-205	ENST00000563350	LZTS3	O60299	673 aa	Predicted RBP	10.16	□□□□□ -0.78
ITFG1-205	ENST00000563350	ARID4A	P29374	1257 aa	Predicted RBP	10.16	□□□□□ -0.78
ITFG1-205	ENST00000563350	NBPF14	Q5TI25	921 aa		10.16	□□□□□ -0.78
ITFG1-205	ENST00000563350	CLP1	Q92989	425 aa	Known RBP	10.16	□□□□□ -0.78
ITFG1-205	ENST00000563350	EMID1	Q96A84	441 aa	Predicted RBP	10.16	□□□□□ -0.78
ITFG1-205	ENST00000563350	SLAIN2	Q9P270	581 aa		10.16	□□□□□ -0.78
ITFG1-205	ENST00000563350	LIAT1	Q6ZQX7	453 aa		10.15	□□□□□ -0.78
ITFG1-205	ENST00000563350	PHTF2	Q8N3S3	785 aa		10.15	□□□□□ -0.78
ITFG1-205	ENST00000563350	OCSTAMP	Q9BR26	566 aa		10.15	□□□□□ -0.78
ITFG1-205	ENST00000563350	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.15	□□□□□ -0.78
ITFG1-205	ENST00000563350	FAM69C	Q0P6D2	419 aa		10.14	□□□□□ -0.79
ITFG1-205	ENST00000563350	EML3	Q32P44	896 aa		10.14	□□□□□ -0.79
ITFG1-205	ENST00000563350	ANKMY2	Q8IV38	441 aa		10.14	□□□□□ -0.79
ITFG1-205	ENST00000563350	NUDT12	Q9BQG2	462 aa		10.14	□□□□□ -0.79
ITFG1-205	ENST00000563350	EVA1B	Q9NVM1	165 aa		10.14	□□□□□ -0.79
ITFG1-205	ENST00000563350	KCNH2	Q12809	1159 aa		10.13	□□□□□ -0.79
ITFG1-205	ENST00000563350	SPRYD7	Q5W111	196 aa		10.13	□□□□□ -0.79
ITFG1-205	ENST00000563350	CCDC24	Q8N4L8	307 aa		10.13	□□□□□ -0.79
ITFG1-205	ENST00000563350	CHIC2	Q9UKJ5	165 aa		10.13	□□□□□ -0.79
ITFG1-205	ENST00000563350	ZBTB24	O43167	697 aa	Predicted RBP	10.12	□□□□□ -0.79
ITFG1-205	ENST00000563350	ATP2B4	P23634	1241 aa		10.12	□□□□□ -0.79
ITFG1-205	ENST00000563350	RPIA	P49247	311 aa		10.12	□□□□□ -0.79
ITFG1-205	ENST00000563350	MAP7D1	Q3KQU3	841 aa		10.12	□□□□□ -0.79
ITFG1-205	ENST00000563350	SWI5	Q1ZZU3	235 aa		10.11	□□□□□ -0.79
ITFG1-205	ENST00000563350	OGFOD1	Q8N543	542 aa		10.11	□□□□□ -0.79
ITFG1-205	ENST00000563350	ADAM32	Q8TC27	787 aa		10.11	□□□□□ -0.79
ITFG1-205	ENST00000563350	SOWAHD	A6NJG2	315 aa		10.1	□□□□□ -0.79
ITFG1-205	ENST00000563350	DPYD	Q12882	1025 aa		10.1	□□□□□ -0.79
ITFG1-205	ENST00000563350	TRAF7	Q6Q0C0	670 aa		10.1	□□□□□ -0.79
ITFG1-205	ENST00000563350	ZNF598	Q86UK7	904 aa	Known RBP	10.1	□□□□□ -0.79
ITFG1-205	ENST00000563350	TRIM50	Q86XT4	487 aa		10.1	□□□□□ -0.79
ITFG1-205	ENST00000563350	ARHGAP9	Q9BRR9	750 aa		10.1	□□□□□ -0.79
ITFG1-205	ENST00000563350	RBM47	A0AV96	593 aa	Known RBP	10.09	□□□□□ -0.79
ITFG1-205	ENST00000563350	ERCC3	P19447	782 aa		10.09	□□□□□ -0.79
ITFG1-205	ENST00000563350	ATP1A2	P50993	1020 aa		10.09	□□□□□ -0.79
ITFG1-205	ENST00000563350	CLDN10	P78369	228 aa		10.09	□□□□□ -0.79
ITFG1-205	ENST00000563350	ZNF594	Q96JF6	807 aa	Predicted RBP	10.09	□□□□□ -0.79
ITFG1-205	ENST00000563350	IRX2	Q9BZI1	471 aa	Predicted RBP	10.09	□□□□□ -0.79
ITFG1-205	ENST00000563350	CD2BP2	O95400	341 aa	Known RBP	10.08	□□□□□ -0.8
ITFG1-205	ENST00000563350	SERPINB4	P48594	390 aa		10.08	□□□□□ -0.8
ITFG1-205	ENST00000563350	ZNF697	Q5TEC3	545 aa		10.08	□□□□□ -0.8
ITFG1-205	ENST00000563350	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.08	□□□□□ -0.8
ITFG1-205	ENST00000563350	DNAAF2	Q9NVR5	837 aa	Known RBP	10.08	□□□□□ -0.8
ITFG1-205	ENST00000563350	NOD1	Q9Y239	953 aa		10.08	□□□□□ -0.8
ITFG1-205	ENST00000563350	UNCX	A6NJT0	531 aa		10.07	□□□□□ -0.8
ITFG1-205	ENST00000563350	ZBTB33	Q86T24	672 aa		10.07	□□□□□ -0.8
ITFG1-205	ENST00000563350	IGSF3	O75054	1194 aa		10.06	□□□□□ -0.8
ITFG1-205	ENST00000563350	TRIM32	Q13049	653 aa		10.06	□□□□□ -0.8
ITFG1-205	ENST00000563350	SH3BP5L	Q7L8J4	393 aa		10.06	□□□□□ -0.8
ITFG1-205	ENST00000563350	DOLK	Q9UPQ8	538 aa		10.06	□□□□□ -0.8
ITFG1-205	ENST00000563350	DZIP3	Q86Y13	1208 aa	Known RBP	10.05	□□□□□ -0.8
ITFG1-205	ENST00000563350	SIX5	Q8N196	739 aa		10.05	□□□□□ -0.8
ITFG1-205	ENST00000563350	LARGE2	Q8N3Y3	721 aa		10.05	□□□□□ -0.8
ITFG1-205	ENST00000563350	C1orf216	Q8TAB5	229 aa		10.05	□□□□□ -0.8
ITFG1-205	ENST00000563350	TSGA10IP	Q3SY00	556 aa		10.04	□□□□□ -0.8
ITFG1-205	ENST00000563350	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.04	□□□□□ -0.8
ITFG1-205	ENST00000563350	UNC93B1	Q9H1C4	597 aa		10.04	□□□□□ -0.8
ITFG1-205	ENST00000563350	OXLD1	Q5BKU9	147 aa		10.03	□□□□□ -0.8
ITFG1-205	ENST00000563350	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms