RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
TCF4-211ENST00000561992 OFD1O75665 1012 aa12.28□□□□□ -0.44
TCF4-211ENST00000561992 TNNT2P45379 298 aaPredicted RBP12.28□□□□□ -0.44
TCF4-211ENST00000561992 NASPP49321 788 aaPredicted RBP12.28□□□□□ -0.44
TCF4-211ENST00000561992 TRAK1Q9UPV9 953 aa12.28□□□□□ -0.44
TCF4-211ENST00000561992 PNPLA6Q8IY17 1366 aa12.28□□□□□ -0.44
TCF4-211ENST00000561992 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
TCF4-211ENST00000561992 GAS2L3Q86XJ1 694 aa12.28□□□□□ -0.44
TCF4-211ENST00000561992 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
TCF4-211ENST00000561992 CDC45O75419 566 aa12.27□□□□□ -0.45
TCF4-211ENST00000561992 RABEP1Q15276 862 aa12.27□□□□□ -0.45
TCF4-211ENST00000561992 MCM5P33992 734 aa12.26□□□□□ -0.45
TCF4-211ENST00000561992 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
TCF4-211ENST00000561992 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
TCF4-211ENST00000561992 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
TCF4-211ENST00000561992 MSNP26038 577 aaKnown RBP12.26□□□□□ -0.45
TCF4-211ENST00000561992 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
TCF4-211ENST00000561992 ZBTB7BO15156 539 aaPredicted RBP12.25□□□□□ -0.45
TCF4-211ENST00000561992 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
TCF4-211ENST00000561992 FCHSD2O94868 740 aa12.25□□□□□ -0.45
TCF4-211ENST00000561992 BAG4O95429 457 aaKnown RBP12.25□□□□□ -0.45
TCF4-211ENST00000561992 MTERF4Q7Z6M4 381 aaKnown RBP12.25□□□□□ -0.45
TCF4-211ENST00000561992 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
TCF4-211ENST00000561992 CLTCQ00610 1675 aaKnown RBP12.24□□□□□ -0.45
TCF4-211ENST00000561992 FRMPD1Q5SYB0 1578 aa12.24□□□□□ -0.45
TCF4-211ENST00000561992 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
TCF4-211ENST00000561992 NPATQ14207 1427 aa12.24□□□□□ -0.45
TCF4-211ENST00000561992 TBC1D9Q6ZT07 1266 aa12.24□□□□□ -0.45
TCF4-211ENST00000561992 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
TCF4-211ENST00000561992 ZNF500O60304 480 aaPredicted RBP12.23□□□□□ -0.45
TCF4-211ENST00000561992 IGSF3O75054 1194 aa12.23□□□□□ -0.45
TCF4-211ENST00000561992 RIPK4P57078 832 aa12.23□□□□□ -0.45
TCF4-211ENST00000561992 ZMYND15Q9H091 742 aa12.23□□□□□ -0.45
TCF4-211ENST00000561992 DDX49Q9Y6V7 483 aaKnown RBP12.23□□□□□ -0.45
TCF4-211ENST00000561992 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
TCF4-211ENST00000561992 CSPP1Q1MSJ5 1256 aa12.23□□□□□ -0.45
TCF4-211ENST00000561992 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
TCF4-211ENST00000561992 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
TCF4-211ENST00000561992 A0A1W2PP64 1363 aa12.23□□□□□ -0.45
TCF4-211ENST00000561992 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
TCF4-211ENST00000561992 CYP2E1P05181 493 aaPredicted RBP12.22□□□□□ -0.45
TCF4-211ENST00000561992 ANKRD45Q5TZF3 282 aa12.22□□□□□ -0.45
TCF4-211ENST00000561992 PDLIM2Q96JY6 352 aa12.22□□□□□ -0.45
TCF4-211ENST00000561992 ABCC3O15438 1527 aa12.22□□□□□ -0.45
TCF4-211ENST00000561992 ABCC4O15439 1325 aa12.22□□□□□ -0.45
TCF4-211ENST00000561992 NOL7Q9UMY1 257 aaKnown RBP12.22□□□□□ -0.45
TCF4-211ENST00000561992 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
TCF4-211ENST00000561992 NEXMIFQ5QGS0 1516 aa12.21□□□□□ -0.45
TCF4-211ENST00000561992 CAMSAP1Q5T5Y3 1602 aa12.21□□□□□ -0.45
TCF4-211ENST00000561992 SSFA2P28290 1259 aa12.21□□□□□ -0.45
TCF4-211ENST00000561992 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
TCF4-211ENST00000561992 MLH3Q9UHC1 1453 aa12.21□□□□□ -0.46
TCF4-211ENST00000561992 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
TCF4-211ENST00000561992 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
TCF4-211ENST00000561992 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
TCF4-211ENST00000561992 GNAI1P63096 354 aa12.19□□□□□ -0.46
TCF4-211ENST00000561992 INTS3Q68E01 1043 aaKnown RBP12.19□□□□□ -0.46
TCF4-211ENST00000561992 CASC1Q6TDU7 716 aa12.19□□□□□ -0.46
TCF4-211ENST00000561992 LRRC7Q96NW7 1537 aa12.18□□□□□ -0.46
TCF4-211ENST00000561992 VAMP4O75379 141 aa12.18□□□□□ -0.46
TCF4-211ENST00000561992 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
TCF4-211ENST00000561992 LMOD3Q0VAK6 560 aa12.18□□□□□ -0.46
TCF4-211ENST00000561992 FYB1O15117 783 aa12.18□□□□□ -0.46
TCF4-211ENST00000561992 ST18O60284 1047 aa12.18□□□□□ -0.46
TCF4-211ENST00000561992 CHGAP10645 457 aaKnown RBP12.18□□□□□ -0.46
TCF4-211ENST00000561992 ZSCAN23Q3MJ62 389 aa12.18□□□□□ -0.46
TCF4-211ENST00000561992 LMBRD1Q9NUN5 540 aa12.18□□□□□ -0.46
TCF4-211ENST00000561992 MBD3O95983 291 aa12.17□□□□□ -0.46
TCF4-211ENST00000561992 NFE2L2Q16236 605 aa12.17□□□□□ -0.46
TCF4-211ENST00000561992 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
TCF4-211ENST00000561992 HDGFL2Q7Z4V5 671 aaPredicted RBP12.17□□□□□ -0.46
TCF4-211ENST00000561992 CD163L1Q9NR16 1453 aa12.17□□□□□ -0.46
TCF4-211ENST00000561992 CHMP4AQ9BY43 222 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 DCTPP1Q9H773 170 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 CCDC39Q9UFE4 941 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 DYNC1I1O14576 645 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 ZNF853P0CG23 659 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 MCM2P49736 904 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 TTC22Q5TAA0 569 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
TCF4-211ENST00000561992 PTPRMP28827 1452 aa12.15□□□□□ -0.46
TCF4-211ENST00000561992 CPSF1Q10570 1443 aaKnown RBP12.15□□□□□ -0.46
TCF4-211ENST00000561992 POGZQ7Z3K3 1410 aa12.15□□□□□ -0.46
TCF4-211ENST00000561992 REC8O95072 547 aa12.15□□□□□ -0.47
TCF4-211ENST00000561992 MCTP1Q6DN14 999 aa12.15□□□□□ -0.47
TCF4-211ENST00000561992 PLEKHM2Q8IWE5 1019 aa12.15□□□□□ -0.47
TCF4-211ENST00000561992 SIRT2Q8IXJ6 389 aa12.15□□□□□ -0.47
TCF4-211ENST00000561992 RPAP2Q8IXW5 612 aaPredicted RBP12.15□□□□□ -0.47
TCF4-211ENST00000561992 GGNBP2Q9H3C7 697 aa12.15□□□□□ -0.47
TCF4-211ENST00000561992 ATP7BP35670 1465 aa12.14□□□□□ -0.47
TCF4-211ENST00000561992 LRSAM1Q6UWE0 723 aa12.14□□□□□ -0.47
TCF4-211ENST00000561992 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
TCF4-211ENST00000561992 SRPK2P78362 688 aaKnown RBP12.13□□□□□ -0.47
TCF4-211ENST00000561992 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
TCF4-211ENST00000561992 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
TCF4-211ENST00000561992 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
TCF4-211ENST00000561992 SLC52A1Q9NWF4 448 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms