RNA–Protein interactions for RNA: ENST00000561437.1

PPP1R3E-209, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-209ENST00000561437 ERICH6BQ5W0A0 696 aa22.25■■□□□ 1.15
PPP1R3E-209ENST00000561437 SALL2Q9Y467 1007 aaPredicted RBP22.25■■□□□ 1.15
PPP1R3E-209ENST00000561437 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
PPP1R3E-209ENST00000561437 COL16A1Q07092 1604 aaPredicted RBP22.24■■□□□ 1.15
PPP1R3E-209ENST00000561437 PLEKHF1Q96S99 279 aa22.23■■□□□ 1.15
PPP1R3E-209ENST00000561437 SPATA31A6Q5VVP1 1343 aa22.23■■□□□ 1.15
PPP1R3E-209ENST00000561437 LRP6O75581 1613 aa22.23■■□□□ 1.15
PPP1R3E-209ENST00000561437 TRPM3Q9HCF6 1732 aaPredicted RBP22.23■■□□□ 1.15
PPP1R3E-209ENST00000561437 CALD1Q05682 793 aaKnown RBP22.21■■□□□ 1.15
PPP1R3E-209ENST00000561437 LMOD3Q0VAK6 560 aa22.21■■□□□ 1.15
PPP1R3E-209ENST00000561437 ARHGEF10O15013 1369 aa22.21■■□□□ 1.15
PPP1R3E-209ENST00000561437 WWC1Q8IX03 1113 aa22.2■■□□□ 1.14
PPP1R3E-209ENST00000561437 RSPH6AQ9H0K4 717 aa22.2■■□□□ 1.14
PPP1R3E-209ENST00000561437 SLIT3O75094 1523 aa22.2■■□□□ 1.14
PPP1R3E-209ENST00000561437 FBLN1P23142 703 aa22.19■■□□□ 1.14
PPP1R3E-209ENST00000561437 SLFN5Q08AF3 891 aa22.19■■□□□ 1.14
PPP1R3E-209ENST00000561437 EIF4A2Q14240 407 aaKnown RBP22.19■■□□□ 1.14
PPP1R3E-209ENST00000561437 SUPT16HQ9Y5B9 1047 aaKnown RBP22.19■■□□□ 1.14
PPP1R3E-209ENST00000561437 USP19O94966 1318 aa22.19■■□□□ 1.14
PPP1R3E-209ENST00000561437 PHRF1Q9P1Y6 1649 aaKnown RBP22.19■■□□□ 1.14
PPP1R3E-209ENST00000561437 MARF1Q9Y4F3 1742 aaKnown RBP22.19■■□□□ 1.14
PPP1R3E-209ENST00000561437 RXRBP28702 533 aa22.18■■□□□ 1.14
PPP1R3E-209ENST00000561437 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
PPP1R3E-209ENST00000561437 IL16Q14005 1332 aa22.17■■□□□ 1.14
PPP1R3E-209ENST00000561437 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
PPP1R3E-209ENST00000561437 IP6K1Q92551 441 aa22.17■■□□□ 1.14
PPP1R3E-209ENST00000561437 MYH16Q9H6N6 1097 aa22.17■■□□□ 1.14
PPP1R3E-209ENST00000561437 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
PPP1R3E-209ENST00000561437 TNS3Q68CZ2 1445 aa22.16■■□□□ 1.14
PPP1R3E-209ENST00000561437 HOXC9P31274 260 aa22.16■■□□□ 1.14
PPP1R3E-209ENST00000561437 TRMT2AQ8IZ69 625 aaKnown RBP22.16■■□□□ 1.14
PPP1R3E-209ENST00000561437 NFAT5O94916 1531 aa22.16■■□□□ 1.14
PPP1R3E-209ENST00000561437 PEAK1Q9H792 1746 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 SOX12O15370 315 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 GCP02774 474 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 HSP90AB2PQ58FF8 381 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 NUTM2GQ5VZR2 741 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 LMOD2Q6P5Q4 547 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 BRINP3Q76B58 766 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 RCAN3Q9UKA8 241 aa22.15■■□□□ 1.14
PPP1R3E-209ENST00000561437 NFE2L2Q16236 605 aa22.14■■□□□ 1.13
PPP1R3E-209ENST00000561437 RIPK4P57078 832 aa22.13■■□□□ 1.13
PPP1R3E-209ENST00000561437 DUSP27Q5VZP5 1158 aa22.13■■□□□ 1.13
PPP1R3E-209ENST00000561437 PXDNQ92626 1479 aa22.13■■□□□ 1.13
PPP1R3E-209ENST00000561437 SPATA31A3Q5VYP0 1347 aa22.12■■□□□ 1.13
PPP1R3E-209ENST00000561437 RNF123Q5XPI4 1314 aa22.12■■□□□ 1.13
PPP1R3E-209ENST00000561437 NEUROD2Q15784 382 aa22.12■■□□□ 1.13
PPP1R3E-209ENST00000561437 CDCA7LQ96GN5 454 aa22.12■■□□□ 1.13
PPP1R3E-209ENST00000561437 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
PPP1R3E-209ENST00000561437 ABCC6O95255 1503 aa22.11■■□□□ 1.13
PPP1R3E-209ENST00000561437 IGSF1Q8N6C5 1336 aa22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 LTN1O94822 1766 aa22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 HMOX1P09601 288 aa22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 CT47B1P0C2W7 299 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 XPCQ01831 940 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 FKBP8Q14318 412 aa22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 SULT6B1Q6IMI4 303 aa22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 ARHGEF25Q86VW2 580 aa22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 KDRP35968 1356 aa22.1■■□□□ 1.13
PPP1R3E-209ENST00000561437 AHDC1Q5TGY3 1603 aaPredicted RBP22.09■■□□□ 1.13
PPP1R3E-209ENST00000561437 SOS2Q07890 1332 aaPredicted RBP22.09■■□□□ 1.13
PPP1R3E-209ENST00000561437 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
PPP1R3E-209ENST00000561437 RRP7AQ9Y3A4 280 aaKnown RBP22.08■■□□□ 1.13
PPP1R3E-209ENST00000561437 SRCAPQ6ZRS2 3230 aa22.07■■□□□ 1.12
PPP1R3E-209ENST00000561437 GAS2L2Q8NHY3 880 aa22.06■■□□□ 1.12
PPP1R3E-209ENST00000561437 NUTM2BA6NNL0 878 aaPredicted RBP22.05■■□□□ 1.12
PPP1R3E-209ENST00000561437 NUTM2EB1AL46 878 aaPredicted RBP22.05■■□□□ 1.12
PPP1R3E-209ENST00000561437 NUTM2AQ8IVF1 878 aaPredicted RBP22.05■■□□□ 1.12
PPP1R3E-209ENST00000561437 HTATSF1O43719 755 aaKnown RBP22.04■■□□□ 1.12
PPP1R3E-209ENST00000561437 EYA1Q99502 592 aa22.04■■□□□ 1.12
PPP1R3E-209ENST00000561437 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
PPP1R3E-209ENST00000561437 AFF2P51816 1311 aa22.04■■□□□ 1.12
PPP1R3E-209ENST00000561437 NHSL1Q5SYE7 1610 aa22.03■■□□□ 1.12
PPP1R3E-209ENST00000561437 CPDO75976 1380 aa22.02■■□□□ 1.12
PPP1R3E-209ENST00000561437 PLEKHG2Q9H7P9 1386 aa22.02■■□□□ 1.12
PPP1R3E-209ENST00000561437 RRP1P56182 461 aaKnown RBP22.01■■□□□ 1.11
PPP1R3E-209ENST00000561437 GNAI1P63096 354 aa22.01■■□□□ 1.11
PPP1R3E-209ENST00000561437 PHACTR3Q96KR7 559 aa22.01■■□□□ 1.11
PPP1R3E-209ENST00000561437 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
PPP1R3E-209ENST00000561437 RGS12O14924 1447 aa21.99■■□□□ 1.11
PPP1R3E-209ENST00000561437 HAP1P54257 671 aaPredicted RBP21.99■■□□□ 1.11
PPP1R3E-209ENST00000561437 RTF1Q92541 710 aaKnown RBP21.99■■□□□ 1.11
PPP1R3E-209ENST00000561437 ZNF428Q96B54 188 aa21.99■■□□□ 1.11
PPP1R3E-209ENST00000561437 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
PPP1R3E-209ENST00000561437 LRRC59Q96AG4 307 aaKnown RBP21.98■■□□□ 1.11
PPP1R3E-209ENST00000561437 ZBTB7CA1YPR0 619 aa21.97■■□□□ 1.11
PPP1R3E-209ENST00000561437 AEBP1Q8IUX7 1158 aa21.97■■□□□ 1.11
PPP1R3E-209ENST00000561437 RBM6P78332 1123 aaKnown RBP21.96■■□□□ 1.11
PPP1R3E-209ENST00000561437 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
PPP1R3E-209ENST00000561437 ANKRD24Q8TF21 1146 aa21.96■■□□□ 1.11
PPP1R3E-209ENST00000561437 DDX17Q92841 729 aaKnown RBP21.96■■□□□ 1.11
PPP1R3E-209ENST00000561437 LTV1Q96GA3 475 aaPredicted RBP21.96■■□□□ 1.11
PPP1R3E-209ENST00000561437 SPINK5Q9NQ38 1064 aaPredicted RBP21.96■■□□□ 1.11
PPP1R3E-209ENST00000561437 FAM208AQ9UK61 1670 aaKnown RBP21.95■■□□□ 1.1
PPP1R3E-209ENST00000561437 NCAPD2Q15021 1401 aa21.95■■□□□ 1.1
PPP1R3E-209ENST00000561437 CRYBG1Q9Y4K1 1723 aa21.94■■□□□ 1.1
PPP1R3E-209ENST00000561437 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
PPP1R3E-209ENST00000561437 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
PPP1R3E-209ENST00000561437 ZC3H6P61129 1189 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms