RNA–Protein interactions for RNA: ENST00000561437.1

PPP1R3E-209, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-209ENST00000561437 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
PPP1R3E-209ENST00000561437 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
PPP1R3E-209ENST00000561437 ABCC9O60706 1549 aa33.19■■■□□ 2.9
PPP1R3E-209ENST00000561437 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
PPP1R3E-209ENST00000561437 DCAF1Q9Y4B6 1507 aa31.96■■■□□ 2.71
PPP1R3E-209ENST00000561437 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
PPP1R3E-209ENST00000561437 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
PPP1R3E-209ENST00000561437 DCAF8L2P0C7V8 631 aa31.62■■■□□ 2.65
PPP1R3E-209ENST00000561437 NACADO15069 1562 aa31.42■■■□□ 2.62
PPP1R3E-209ENST00000561437 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
PPP1R3E-209ENST00000561437 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
PPP1R3E-209ENST00000561437 PABPN1Q86U42 306 aaKnown RBP eCLIP30.75■■■□□ 2.516e-6■■□□□ 12.8
PPP1R3E-209ENST00000561437 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
PPP1R3E-209ENST00000561437 UNC13AQ9UPW8 1703 aa30.56■■■□□ 2.48
PPP1R3E-209ENST00000561437 BICRAQ9NZM4 1560 aa30.33■■■□□ 2.45
PPP1R3E-209ENST00000561437 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
PPP1R3E-209ENST00000561437 CC2D2AQ9P2K1 1620 aa29.95■■■□□ 2.38
PPP1R3E-209ENST00000561437 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
PPP1R3E-209ENST00000561437 DNAJC5Q9H3Z4 198 aa29.81■■■□□ 2.36
PPP1R3E-209ENST00000561437 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
PPP1R3E-209ENST00000561437 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
PPP1R3E-209ENST00000561437 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
PPP1R3E-209ENST00000561437 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
PPP1R3E-209ENST00000561437 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
PPP1R3E-209ENST00000561437 WIZO95785 1651 aa29.3■■■□□ 2.28
PPP1R3E-209ENST00000561437 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
PPP1R3E-209ENST00000561437 SMARCA2P51531 1590 aa29.21■■■□□ 2.27
PPP1R3E-209ENST00000561437 TOP2AP11388 1531 aaKnown RBP29.17■■■□□ 2.26
PPP1R3E-209ENST00000561437 ATAD2BQ9ULI0 1458 aa29.09■■■□□ 2.25
PPP1R3E-209ENST00000561437 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
PPP1R3E-209ENST00000561437 CUX2O14529 1486 aa28.95■■■□□ 2.22
PPP1R3E-209ENST00000561437 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
PPP1R3E-209ENST00000561437 HMGXB3Q12766 1538 aa28.91■■■□□ 2.22
PPP1R3E-209ENST00000561437 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
PPP1R3E-209ENST00000561437 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
PPP1R3E-209ENST00000561437 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
PPP1R3E-209ENST00000561437 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
PPP1R3E-209ENST00000561437 NESP48681 1621 aa28.26■■■□□ 2.11
PPP1R3E-209ENST00000561437 CFTRP13569 1480 aa28.23■■■□□ 2.11
PPP1R3E-209ENST00000561437 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
PPP1R3E-209ENST00000561437 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
PPP1R3E-209ENST00000561437 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
PPP1R3E-209ENST00000561437 WRNQ14191 1432 aaPredicted RBP eCLIP28.05■■■□□ 2.08
PPP1R3E-209ENST00000561437 ABCC8Q09428 1581 aa28.02■■■□□ 2.08
PPP1R3E-209ENST00000561437 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
PPP1R3E-209ENST00000561437 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
PPP1R3E-209ENST00000561437 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
PPP1R3E-209ENST00000561437 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
PPP1R3E-209ENST00000561437 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
PPP1R3E-209ENST00000561437 EEA1Q15075 1411 aa27.82■■■□□ 2.04
PPP1R3E-209ENST00000561437 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
PPP1R3E-209ENST00000561437 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
PPP1R3E-209ENST00000561437 CEP164Q9UPV0 1460 aa27.69■■■□□ 2.02
PPP1R3E-209ENST00000561437 CUX1P39880 1505 aa27.67■■■□□ 2.02
PPP1R3E-209ENST00000561437 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.02
PPP1R3E-209ENST00000561437 WDR62O43379 1518 aa27.6■■■□□ 2.01
PPP1R3E-209ENST00000561437 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
PPP1R3E-209ENST00000561437 FAM9AQ8IZU1 332 aaPredicted RBP27.53■■■□□ 2
PPP1R3E-209ENST00000561437 SOGA1O94964 1423 aa27.51■■□□□ 1.99
PPP1R3E-209ENST00000561437 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
PPP1R3E-209ENST00000561437 OSCARQ8IYS5 282 aa27.48■■□□□ 1.99
PPP1R3E-209ENST00000561437 TOPBP1Q92547 1522 aa27.47■■□□□ 1.99
PPP1R3E-209ENST00000561437 KIF27Q86VH2 1401 aa27.43■■□□□ 1.98
PPP1R3E-209ENST00000561437 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
PPP1R3E-209ENST00000561437 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.98
PPP1R3E-209ENST00000561437 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
PPP1R3E-209ENST00000561437 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
PPP1R3E-209ENST00000561437 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
PPP1R3E-209ENST00000561437 KIF21BO75037 1637 aa27.3■■□□□ 1.96
PPP1R3E-209ENST00000561437 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
PPP1R3E-209ENST00000561437 GOLGA3Q08378 1498 aa27.27■■□□□ 1.96
PPP1R3E-209ENST00000561437 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
PPP1R3E-209ENST00000561437 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
PPP1R3E-209ENST00000561437 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
PPP1R3E-209ENST00000561437 ERICH3Q5RHP9 1530 aa27.18■■□□□ 1.94
PPP1R3E-209ENST00000561437 TNIKQ9UKE5 1360 aa27.18■■□□□ 1.94
PPP1R3E-209ENST00000561437 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
PPP1R3E-209ENST00000561437 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
PPP1R3E-209ENST00000561437 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
PPP1R3E-209ENST00000561437 UBTFP17480 764 aaKnown RBP27.09■■□□□ 1.93
PPP1R3E-209ENST00000561437 IFT140Q96RY7 1462 aa27.08■■□□□ 1.93
PPP1R3E-209ENST00000561437 IGF1RP08069 1367 aa27.08■■□□□ 1.93
PPP1R3E-209ENST00000561437 ARHGEF11O15085 1522 aa27.05■■□□□ 1.92
PPP1R3E-209ENST00000561437 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
PPP1R3E-209ENST00000561437 CUL7Q14999 1698 aa27.01■■□□□ 1.92
PPP1R3E-209ENST00000561437 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
PPP1R3E-209ENST00000561437 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
PPP1R3E-209ENST00000561437 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
PPP1R3E-209ENST00000561437 EHMT2Q96KQ7 1210 aa26.99■■□□□ 1.91
PPP1R3E-209ENST00000561437 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
PPP1R3E-209ENST00000561437 CEP162Q5TB80 1403 aa26.92■■□□□ 1.9
PPP1R3E-209ENST00000561437 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
PPP1R3E-209ENST00000561437 TRHP20396 242 aaPredicted RBP26.89■■□□□ 1.9
PPP1R3E-209ENST00000561437 CYB5RLQ6IPT4 315 aa26.89■■□□□ 1.9
PPP1R3E-209ENST00000561437 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
PPP1R3E-209ENST00000561437 GRIN2BQ13224 1484 aa26.84■■□□□ 1.89
PPP1R3E-209ENST00000561437 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
PPP1R3E-209ENST00000561437 CLIP1P30622 1438 aa26.78■■□□□ 1.88
PPP1R3E-209ENST00000561437 FHAD1B1AJZ9 1412 aa26.75■■□□□ 1.87
PPP1R3E-209ENST00000561437 AEBP2Q6ZN18 517 aaPredicted RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms