RNA–Protein interactions for RNA: ENST00000560887.1

TCF12-220, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-220ENST00000560887 KIF7Q2M1P5 1343 aa9.22□□□□□ -0.93
TCF12-220ENST00000560887 PRR36Q9H6K5 1346 aa9.22□□□□□ -0.93
TCF12-220ENST00000560887 PIK3C2AO00443 1686 aa9.22□□□□□ -0.93
TCF12-220ENST00000560887 ANKRD36BQ8N2N9 1353 aa9.22□□□□□ -0.93
TCF12-220ENST00000560887 CRYBG1Q9Y4K1 1723 aa9.22□□□□□ -0.93
TCF12-220ENST00000560887 CD163L1Q9NR16 1453 aa9.21□□□□□ -0.93
TCF12-220ENST00000560887 TOM1O60784 492 aa9.21□□□□□ -0.94
TCF12-220ENST00000560887 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.94
TCF12-220ENST00000560887 MARF1Q9Y4F3 1742 aaKnown RBP9.21□□□□□ -0.94
TCF12-220ENST00000560887 BRD4O60885 1362 aaPredicted RBP9.21□□□□□ -0.94
TCF12-220ENST00000560887 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
TCF12-220ENST00000560887 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
TCF12-220ENST00000560887 MYT1Q01538 1121 aa9.2□□□□□ -0.94
TCF12-220ENST00000560887 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
TCF12-220ENST00000560887 PRKRIP1Q9H875 184 aaPredicted RBP9.2□□□□□ -0.94
TCF12-220ENST00000560887 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
TCF12-220ENST00000560887 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
TCF12-220ENST00000560887 USP6P35125 1406 aa9.2□□□□□ -0.94
TCF12-220ENST00000560887 CPSF1Q10570 1443 aaKnown RBP9.2□□□□□ -0.94
TCF12-220ENST00000560887 EDC4Q6P2E9 1401 aaKnown RBP9.2□□□□□ -0.94
TCF12-220ENST00000560887 NPHP3Q7Z494 1330 aa9.19□□□□□ -0.94
TCF12-220ENST00000560887 TNS3Q68CZ2 1445 aa9.19□□□□□ -0.94
TCF12-220ENST00000560887 UBAP1LF5GYI3 381 aa9.18□□□□□ -0.94
TCF12-220ENST00000560887 INSRP06213 1382 aa9.18□□□□□ -0.94
TCF12-220ENST00000560887 PSEN1P49768 467 aa9.18□□□□□ -0.94
TCF12-220ENST00000560887 BRINP3Q76B58 766 aa9.18□□□□□ -0.94
TCF12-220ENST00000560887 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
TCF12-220ENST00000560887 PHF8Q9UPP1 1060 aa9.18□□□□□ -0.94
TCF12-220ENST00000560887 SUPT16HQ9Y5B9 1047 aaKnown RBP9.18□□□□□ -0.94
TCF12-220ENST00000560887 SBNO1A3KN83 1393 aa9.17□□□□□ -0.94
TCF12-220ENST00000560887 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
TCF12-220ENST00000560887 C11orf95C9JLR9 678 aaPredicted RBP9.17□□□□□ -0.94
TCF12-220ENST00000560887 ESCO1Q5FWF5 840 aa9.17□□□□□ -0.94
TCF12-220ENST00000560887 TERF2IPQ9NYB0 399 aa9.17□□□□□ -0.94
TCF12-220ENST00000560887 NSD3Q9BZ95 1437 aa9.16□□□□□ -0.94
TCF12-220ENST00000560887 NSD2O96028 1365 aa9.16□□□□□ -0.94
TCF12-220ENST00000560887 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
TCF12-220ENST00000560887 SEC24BO95487 1268 aa9.16□□□□□ -0.94
TCF12-220ENST00000560887 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
TCF12-220ENST00000560887 MAMSTRQ6ZN01 415 aa9.16□□□□□ -0.94
TCF12-220ENST00000560887 HDGFL2Q7Z4V5 671 aaPredicted RBP9.16□□□□□ -0.94
TCF12-220ENST00000560887 SSH2Q76I76 1423 aa9.15□□□□□ -0.94
TCF12-220ENST00000560887 ARHGEF10O15013 1369 aa9.15□□□□□ -0.94
TCF12-220ENST00000560887 LTN1O94822 1766 aa9.15□□□□□ -0.94
TCF12-220ENST00000560887 ACEP12821 1306 aa9.15□□□□□ -0.94
TCF12-220ENST00000560887 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
TCF12-220ENST00000560887 TMC1Q8TDI8 760 aa9.15□□□□□ -0.94
TCF12-220ENST00000560887 POLR3GLQ9BT43 218 aa9.15□□□□□ -0.94
TCF12-220ENST00000560887 SLIT3O75094 1523 aa9.15□□□□□ -0.95
TCF12-220ENST00000560887 ABCC6O95255 1503 aa9.15□□□□□ -0.95
TCF12-220ENST00000560887 TTC21AQ8NDW8 1320 aa9.14□□□□□ -0.95
TCF12-220ENST00000560887 ERICH6Q7L0X2 663 aa9.14□□□□□ -0.95
TCF12-220ENST00000560887 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
TCF12-220ENST00000560887 NGDNQ8NEJ9 315 aaKnown RBP9.14□□□□□ -0.95
TCF12-220ENST00000560887 OCEL1Q9H607 264 aa9.14□□□□□ -0.95
TCF12-220ENST00000560887 CABP1Q9NZU7 370 aa9.14□□□□□ -0.95
TCF12-220ENST00000560887 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
TCF12-220ENST00000560887 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
TCF12-220ENST00000560887 SOS2Q07890 1332 aaPredicted RBP9.13□□□□□ -0.95
TCF12-220ENST00000560887 ZBED9Q6R2W3 1325 aa9.13□□□□□ -0.95
TCF12-220ENST00000560887 RALBP1Q15311 655 aa9.13□□□□□ -0.95
TCF12-220ENST00000560887 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
TCF12-220ENST00000560887 ORAI2Q96SN7 254 aa9.13□□□□□ -0.95
TCF12-220ENST00000560887 NPC1L1Q9UHC9 1359 aa9.12□□□□□ -0.95
TCF12-220ENST00000560887 CGNL1Q0VF96 1302 aa9.12□□□□□ -0.95
TCF12-220ENST00000560887 PIP4K2BP78356 416 aa9.12□□□□□ -0.95
TCF12-220ENST00000560887 PSME1Q06323 249 aa9.12□□□□□ -0.95
TCF12-220ENST00000560887 PMFBP1Q8TBY8 1022 aa9.12□□□□□ -0.95
TCF12-220ENST00000560887 SLC12A5Q9H2X9 1139 aa9.12□□□□□ -0.95
TCF12-220ENST00000560887 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
TCF12-220ENST00000560887 NFAT5O94916 1531 aa9.11□□□□□ -0.95
TCF12-220ENST00000560887 PLCH1Q4KWH8 1693 aa9.11□□□□□ -0.95
TCF12-220ENST00000560887 FOXO3O43524 673 aa9.11□□□□□ -0.95
TCF12-220ENST00000560887 NWD2Q9ULI1 1742 aa9.11□□□□□ -0.95
TCF12-220ENST00000560887 COL14A1Q05707 1796 aaKnown RBP9.1□□□□□ -0.95
TCF12-220ENST00000560887 NEFLP07196 543 aa9.1□□□□□ -0.95
TCF12-220ENST00000560887 PLCG2P16885 1265 aa9.1□□□□□ -0.95
TCF12-220ENST00000560887 PDCD7Q8N8D1 485 aaKnown RBP9.1□□□□□ -0.95
TCF12-220ENST00000560887 FBXO41Q8TF61 875 aa9.1□□□□□ -0.95
TCF12-220ENST00000560887 USP31Q70CQ4 1352 aa9.1□□□□□ -0.95
TCF12-220ENST00000560887 PNPLA6Q8IY17 1366 aa9.1□□□□□ -0.95
TCF12-220ENST00000560887 JCADQ9P266 1359 aa9.1□□□□□ -0.95
TCF12-220ENST00000560887 SPATA31A3Q5VYP0 1347 aa9.09□□□□□ -0.95
TCF12-220ENST00000560887 TTC21BQ7Z4L5 1316 aa9.09□□□□□ -0.95
TCF12-220ENST00000560887 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.09□□□□□ -0.95
TCF12-220ENST00000560887 KRT28Q7Z3Y7 464 aa9.09□□□□□ -0.95
TCF12-220ENST00000560887 PANK3Q9H999 370 aa9.09□□□□□ -0.95
TCF12-220ENST00000560887 SCUBE2Q9NQ36 999 aa9.09□□□□□ -0.95
TCF12-220ENST00000560887 MAP2P11137 1827 aaKnown RBP9.09□□□□□ -0.95
TCF12-220ENST00000560887 USP19O94966 1318 aa9.08□□□□□ -0.96
TCF12-220ENST00000560887 LMO7Q8WWI1 1683 aa9.08□□□□□ -0.96
TCF12-220ENST00000560887 XPCQ01831 940 aaPredicted RBP9.08□□□□□ -0.96
TCF12-220ENST00000560887 KNSTRNQ9Y448 316 aa9.08□□□□□ -0.96
TCF12-220ENST00000560887 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
TCF12-220ENST00000560887 SMG6Q86US8 1419 aaKnown RBP9.07□□□□□ -0.96
TCF12-220ENST00000560887 DDX17Q92841 729 aaKnown RBP9.07□□□□□ -0.96
TCF12-220ENST00000560887 LRRC59Q96AG4 307 aaKnown RBP9.07□□□□□ -0.96
TCF12-220ENST00000560887 WNK3Q9BYP7 1800 aa9.07□□□□□ -0.96
TCF12-220ENST00000560887 PEAK1Q9H792 1746 aa9.06□□□□□ -0.96
TCF12-220ENST00000560887 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms