RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 GLMNQ92990 594 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 TSKSQ9UJT2 592 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 PNMA3Q9UL41 463 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 ATP7AQ04656 1500 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 ZNF644Q9H582 1327 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-222ENST00000544585 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
CPSF7-222ENST00000544585 PPP1R3GB7ZBB8 358 aa9.55□□□□□ -0.88
CPSF7-222ENST00000544585 RTL5Q5HYW3 569 aaPredicted RBP9.55□□□□□ -0.88
CPSF7-222ENST00000544585 PACS2Q86VP3 889 aa9.55□□□□□ -0.88
CPSF7-222ENST00000544585 TMEM134Q9H6X4 195 aa9.55□□□□□ -0.88
CPSF7-222ENST00000544585 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
CPSF7-222ENST00000544585 SYCP2Q9BX26 1530 aa9.55□□□□□ -0.88
CPSF7-222ENST00000544585 ZNF142P52746 1687 aaPredicted RBP9.55□□□□□ -0.88
CPSF7-222ENST00000544585 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
CPSF7-222ENST00000544585 MED1Q15648 1581 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-222ENST00000544585 MTUS2Q5JR59 1369 aa9.54□□□□□ -0.88
CPSF7-222ENST00000544585 DNMT1P26358 1616 aaKnown RBP9.54□□□□□ -0.88
CPSF7-222ENST00000544585 USP17L8P0C7I0 530 aa9.54□□□□□ -0.88
CPSF7-222ENST00000544585 PTPREP23469 700 aa9.54□□□□□ -0.88
CPSF7-222ENST00000544585 PRPF38BQ5VTL8 546 aaKnown RBP9.54□□□□□ -0.88
CPSF7-222ENST00000544585 TATDN2Q93075 761 aa9.54□□□□□ -0.88
CPSF7-222ENST00000544585 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
CPSF7-222ENST00000544585 CDC42BPAQ5VT25 1732 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 MYO3AQ8NEV4 1616 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 POM121CA8CG34 1229 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 KDM4AO75164 1064 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 NPHP4O75161 1426 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-222ENST00000544585 PLXNC1O60486 1568 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 MED14O60244 1454 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 FYCO1Q9BQS8 1478 aa9.53□□□□□ -0.88
CPSF7-222ENST00000544585 FAM135AQ9P2D6 1515 aa9.52□□□□□ -0.88
CPSF7-222ENST00000544585 POTEIP0CG38 1075 aa9.52□□□□□ -0.89
CPSF7-222ENST00000544585 CABLES1Q8TDN4 633 aa9.52□□□□□ -0.89
CPSF7-222ENST00000544585 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
CPSF7-222ENST00000544585 RGS17Q9UGC6 210 aaPredicted RBP9.52□□□□□ -0.89
CPSF7-222ENST00000544585 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
CPSF7-222ENST00000544585 NLRP1Q9C000 1473 aa9.52□□□□□ -0.89
CPSF7-222ENST00000544585 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
CPSF7-222ENST00000544585 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
CPSF7-222ENST00000544585 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-222ENST00000544585 USP46P62068 366 aa9.51□□□□□ -0.89
CPSF7-222ENST00000544585 PZPP20742 1482 aa9.51□□□□□ -0.89
CPSF7-222ENST00000544585 MBD5Q9P267 1494 aa9.51□□□□□ -0.89
CPSF7-222ENST00000544585 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-222ENST00000544585 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
CPSF7-222ENST00000544585 WASHC4Q2M389 1173 aa9.49□□□□□ -0.89
CPSF7-222ENST00000544585 TXNDC2Q86VQ3 553 aa9.49□□□□□ -0.89
CPSF7-222ENST00000544585 EID1Q9Y6B2 187 aa9.49□□□□□ -0.89
CPSF7-222ENST00000544585 UGGT1Q9NYU2 1555 aa9.49□□□□□ -0.89
CPSF7-222ENST00000544585 ADGBQ8N7X0 1667 aa9.48□□□□□ -0.89
CPSF7-222ENST00000544585 FDX1P10109 184 aa9.48□□□□□ -0.89
CPSF7-222ENST00000544585 IRF5Q13568 498 aa9.48□□□□□ -0.89
CPSF7-222ENST00000544585 HDGFL1Q5TGJ6 251 aa9.48□□□□□ -0.89
CPSF7-222ENST00000544585 LRRC7Q96NW7 1537 aa9.47□□□□□ -0.89
CPSF7-222ENST00000544585 VWDEQ8N2E2 1590 aa9.47□□□□□ -0.89
CPSF7-222ENST00000544585 NEURL4Q96JN8 1562 aa9.47□□□□□ -0.89
CPSF7-222ENST00000544585 GCGRP47871 477 aa9.47□□□□□ -0.89
CPSF7-222ENST00000544585 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
CPSF7-222ENST00000544585 FAM135BQ49AJ0 1406 aa9.47□□□□□ -0.89
CPSF7-222ENST00000544585 SMAPO00193 183 aa9.46□□□□□ -0.9
CPSF7-222ENST00000544585 HOXA2O43364 376 aa9.46□□□□□ -0.9
CPSF7-222ENST00000544585 LTKP29376 864 aa9.46□□□□□ -0.9
CPSF7-222ENST00000544585 POTEAQ6S8J7 498 aa9.46□□□□□ -0.9
CPSF7-222ENST00000544585 PBXIP1Q96AQ6 731 aa9.46□□□□□ -0.9
CPSF7-222ENST00000544585 GJD4Q96KN9 370 aaPredicted RBP9.46□□□□□ -0.9
CPSF7-222ENST00000544585 GZF1Q9H116 711 aaPredicted RBP9.46□□□□□ -0.9
CPSF7-222ENST00000544585 KDM5DQ9BY66 1539 aa9.46□□□□□ -0.9
CPSF7-222ENST00000544585 DEPDC5O75140 1603 aa9.45□□□□□ -0.9
CPSF7-222ENST00000544585 PATL2C9JE40 543 aaKnown RBP9.45□□□□□ -0.9
CPSF7-222ENST00000544585 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-222ENST00000544585 CEP162Q5TB80 1403 aa9.45□□□□□ -0.9
CPSF7-222ENST00000544585 KCNA6P17658 529 aa9.44□□□□□ -0.9
CPSF7-222ENST00000544585 RFX1P22670 979 aa9.44□□□□□ -0.9
CPSF7-222ENST00000544585 CTDSPL2Q05D32 466 aa9.44□□□□□ -0.9
CPSF7-222ENST00000544585 TSC1Q92574 1164 aa9.44□□□□□ -0.9
CPSF7-222ENST00000544585 CCDC141Q6ZP82 1450 aa9.44□□□□□ -0.9
CPSF7-222ENST00000544585 POLR1AO95602 1720 aaPredicted RBP9.44□□□□□ -0.9
CPSF7-222ENST00000544585 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
CPSF7-222ENST00000544585 MTMR2Q13614 643 aa9.43□□□□□ -0.9
CPSF7-222ENST00000544585 CSB-PGBD3P0DP91 1061 aa9.42□□□□□ -0.9
CPSF7-222ENST00000544585 PROX2Q3B8N5 592 aa9.42□□□□□ -0.9
CPSF7-222ENST00000544585 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-222ENST00000544585 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
CPSF7-222ENST00000544585 VAC14Q08AM6 782 aa9.41□□□□□ -0.9
CPSF7-222ENST00000544585 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
CPSF7-222ENST00000544585 PCDHGC3Q9UN70 934 aa9.41□□□□□ -0.9
CPSF7-222ENST00000544585 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-222ENST00000544585 HDGFP51858 240 aaKnown RBP9.4□□□□□ -0.9
CPSF7-222ENST00000544585 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
CPSF7-222ENST00000544585 GRIPAP1Q4V328 841 aa9.4□□□□□ -0.9
CPSF7-222ENST00000544585 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
CPSF7-222ENST00000544585 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
CPSF7-222ENST00000544585 USTQ9Y2C2 406 aa9.4□□□□□ -0.9
CPSF7-222ENST00000544585 SCAF11Q99590 1463 aaKnown RBP9.4□□□□□ -0.91
CPSF7-222ENST00000544585 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
CPSF7-222ENST00000544585 TIAM1Q13009 1591 aa9.39□□□□□ -0.91
CPSF7-222ENST00000544585 MFAP1P55081 439 aaKnown RBP9.39□□□□□ -0.91
CPSF7-222ENST00000544585 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms