RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 CCDC91Q7Z6B0 441 aa13.13□□□□□ -0.31
ERBB2-204ENST00000541774 MYCBPQ99417 103 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-204ENST00000541774 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
ERBB2-204ENST00000541774 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
ERBB2-204ENST00000541774 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
ERBB2-204ENST00000541774 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
ERBB2-204ENST00000541774 PAXBP1Q9Y5B6 917 aa13.13□□□□□ -0.31
ERBB2-204ENST00000541774 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
ERBB2-204ENST00000541774 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
ERBB2-204ENST00000541774 IGHDP01880 384 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 ZBTB9Q96C00 473 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 KIAA1107Q9UPP5 1409 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 ZBTB22O15209 634 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-204ENST00000541774 HMMRO75330 724 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 RBSNQ9H1K0 784 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 CTTNBP2Q8WZ74 1663 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-204ENST00000541774 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 RUFY1Q96T51 708 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
ERBB2-204ENST00000541774 MAP3K1Q13233 1512 aa13.11□□□□□ -0.31
ERBB2-204ENST00000541774 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
ERBB2-204ENST00000541774 FBXO31Q5XUX0 539 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-204ENST00000541774 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
ERBB2-204ENST00000541774 H3BQV1 296 aa13.11□□□□□ -0.31
ERBB2-204ENST00000541774 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
ERBB2-204ENST00000541774 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
ERBB2-204ENST00000541774 PLEKHH2Q8IVE3 1493 aa13.11□□□□□ -0.31
ERBB2-204ENST00000541774 SSR1P43307 286 aaKnown RBP13.11□□□□□ -0.31
ERBB2-204ENST00000541774 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-204ENST00000541774 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
ERBB2-204ENST00000541774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.1□□□□□ -0.31
ERBB2-204ENST00000541774 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
ERBB2-204ENST00000541774 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
ERBB2-204ENST00000541774 CABP2Q9NPB3 220 aa13.1□□□□□ -0.31
ERBB2-204ENST00000541774 A0A1B0GUL7 405 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 KIF2AO00139 706 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-204ENST00000541774 RAPGEF6Q8TEU7 1601 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 ERLIN1O75477 346 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 HCLS1P14317 486 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-204ENST00000541774 MCM2P49736 904 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 KRBA2Q6ZNG9 492 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 C17orf53Q8N3J3 647 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-204ENST00000541774 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
ERBB2-204ENST00000541774 WDR33Q9C0J8 1336 aaKnown RBP13.09□□□□□ -0.31
ERBB2-204ENST00000541774 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 RAB3GAP1Q15042 981 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
ERBB2-204ENST00000541774 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
ERBB2-204ENST00000541774 CCP110O43303 1012 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 SMC2O95347 1197 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 CT47B1P0C2W7 299 aaPredicted RBP13.08□□□□□ -0.32
ERBB2-204ENST00000541774 CEBPAP49715 358 aaPredicted RBP13.08□□□□□ -0.32
ERBB2-204ENST00000541774 ANKRD20A12PQ8NF67 263 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 UGGT2Q9NYU1 1516 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 PBRM1Q86U86 1689 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 CCDC141Q6ZP82 1450 aa13.08□□□□□ -0.32
ERBB2-204ENST00000541774 CCDC183Q5T5S1 534 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 TNMDQ9H2S6 317 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 IVLP07476 585 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 TPM1P09493 284 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 GDPD2Q9HCC8 539 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 NUP160Q12769 1436 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
ERBB2-204ENST00000541774 URI1O94763 535 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-204ENST00000541774 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-204ENST00000541774 SECISBP2LQ93073 1101 aaKnown RBP13.07□□□□□ -0.32
ERBB2-204ENST00000541774 CCDC73Q6ZRK6 1079 aa13.06□□□□□ -0.32
ERBB2-204ENST00000541774 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
ERBB2-204ENST00000541774 CEP170Q5SW79 1584 aa13.06□□□□□ -0.32
ERBB2-204ENST00000541774 SARNPP82979 210 aaKnown RBP13.06□□□□□ -0.32
ERBB2-204ENST00000541774 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
ERBB2-204ENST00000541774 TEX2Q8IWB9 1127 aa13.06□□□□□ -0.32
ERBB2-204ENST00000541774 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
ERBB2-204ENST00000541774 NAT10Q9H0A0 1025 aaKnown RBP13.06□□□□□ -0.32
ERBB2-204ENST00000541774 ADGRL1O94910 1474 aa13.05□□□□□ -0.32
ERBB2-204ENST00000541774 PDILTQ8N807 584 aa13.05□□□□□ -0.32
ERBB2-204ENST00000541774 SLC12A5Q9H2X9 1139 aa13.05□□□□□ -0.32
ERBB2-204ENST00000541774 MAGI3Q5TCQ9 1506 aa13.05□□□□□ -0.32
ERBB2-204ENST00000541774 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.05□□□□□ -0.32
ERBB2-204ENST00000541774 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
ERBB2-204ENST00000541774 KIF14Q15058 1648 aa13.05□□□□□ -0.32
ERBB2-204ENST00000541774 SMTNL1A8MU46 457 aa13.05□□□□□ -0.32
ERBB2-204ENST00000541774 LTV1Q96GA3 475 aaPredicted RBP13.05□□□□□ -0.32
ERBB2-204ENST00000541774 SDF4Q9BRK5 362 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 CNPY4Q8N129 248 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 CAPN2P17655 700 aa13.04□□□□□ -0.32
ERBB2-204ENST00000541774 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms