RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CENPJQ9HC77 1338 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-212ENST00000539975 NRXN3Q9Y4C0 1643 aa9.07□□□□□ -0.96
SNHG1-212ENST00000539975 E2F4Q16254 413 aa9.07□□□□□ -0.96
SNHG1-212ENST00000539975 MARVELD3Q96A59 401 aa9.07□□□□□ -0.96
SNHG1-212ENST00000539975 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
SNHG1-212ENST00000539975 PCDH10Q9P2E7 1040 aa9.07□□□□□ -0.96
SNHG1-212ENST00000539975 NWD1Q149M9 1564 aa9.07□□□□□ -0.96
SNHG1-212ENST00000539975 TECPR2O15040 1411 aa9.06□□□□□ -0.96
SNHG1-212ENST00000539975 ERBB3P21860 1342 aa9.05□□□□□ -0.96
SNHG1-212ENST00000539975 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-212ENST00000539975 PSDA5PKW4 1024 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-212ENST00000539975 ZNF316A6NFI3 1004 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-212ENST00000539975 SRPK2P78362 688 aaKnown RBP9.05□□□□□ -0.96
SNHG1-212ENST00000539975 MAP3K9P80192 1104 aa9.05□□□□□ -0.96
SNHG1-212ENST00000539975 UPF1Q92900 1129 aaKnown RBP eCLIP9.05□□□□□ -0.961e-26■□□□□ 8.6
SNHG1-212ENST00000539975 HIRIP3Q9BW71 556 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-212ENST00000539975 ADGRL3Q9HAR2 1447 aa9.05□□□□□ -0.96
SNHG1-212ENST00000539975 CHD2O14647 1828 aaKnown RBP9.04□□□□□ -0.96
SNHG1-212ENST00000539975 NUDT7P0C024 238 aa9.04□□□□□ -0.96
SNHG1-212ENST00000539975 EIF4G2P78344 907 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNHG1-212ENST00000539975 CDCA8Q53HL2 280 aa9.04□□□□□ -0.96
SNHG1-212ENST00000539975 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
SNHG1-212ENST00000539975 KHSRPQ92945 711 aaKnown RBP eCLIP9.04□□□□□ -0.962e-12■■■□□ 16.9
SNHG1-212ENST00000539975 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
SNHG1-212ENST00000539975 ARIH1Q9Y4X5 557 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-212ENST00000539975 DCCP43146 1447 aa9.04□□□□□ -0.96
SNHG1-212ENST00000539975 EVC2Q86UK5 1308 aa9.04□□□□□ -0.96
SNHG1-212ENST00000539975 RALGAPBQ86X10 1494 aa9.03□□□□□ -0.96
SNHG1-212ENST00000539975 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
SNHG1-212ENST00000539975 WASLO00401 505 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-212ENST00000539975 DLC1Q96QB1 1528 aa9.03□□□□□ -0.96
SNHG1-212ENST00000539975 ADGRB1O14514 1584 aa9.03□□□□□ -0.96
SNHG1-212ENST00000539975 KIAA1210Q9ULL0 1709 aa9.02□□□□□ -0.96
SNHG1-212ENST00000539975 GPRASP1Q5JY77 1395 aa9.02□□□□□ -0.97
SNHG1-212ENST00000539975 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.97
SNHG1-212ENST00000539975 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
SNHG1-212ENST00000539975 TMF1P82094 1093 aa9.02□□□□□ -0.97
SNHG1-212ENST00000539975 CDK19Q9BWU1 502 aa9.02□□□□□ -0.97
SNHG1-212ENST00000539975 ANO8Q9HCE9 1232 aaPredicted RBP9.02□□□□□ -0.97
SNHG1-212ENST00000539975 XRN1Q8IZH2 1706 aaKnown RBP9.02□□□□□ -0.97
SNHG1-212ENST00000539975 ST20-MTHFSA0A0A6YYL1 179 aa9.01□□□□□ -0.97
SNHG1-212ENST00000539975 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
SNHG1-212ENST00000539975 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
SNHG1-212ENST00000539975 ASXL1Q8IXJ9 1541 aa9□□□□□ -0.97
SNHG1-212ENST00000539975 USP47Q96K76 1375 aa9□□□□□ -0.97
SNHG1-212ENST00000539975 EVI5O60447 810 aa9□□□□□ -0.97
SNHG1-212ENST00000539975 PSME1Q06323 249 aa9□□□□□ -0.97
SNHG1-212ENST00000539975 NGDNQ8NEJ9 315 aaKnown RBP9□□□□□ -0.97
SNHG1-212ENST00000539975 LHX6Q9UPM6 363 aa9□□□□□ -0.97
SNHG1-212ENST00000539975 TRPM1Q7Z4N2 1603 aa8.99□□□□□ -0.97
SNHG1-212ENST00000539975 SPDYE16A6NNV3 312 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-212ENST00000539975 VARS2Q5ST30 1063 aaKnown RBP8.99□□□□□ -0.97
SNHG1-212ENST00000539975 NUDT16Q96DE0 195 aaKnown RBP8.99□□□□□ -0.97
SNHG1-212ENST00000539975 SETD1AO15047 1707 aaKnown RBP8.99□□□□□ -0.97
SNHG1-212ENST00000539975 NPHP3Q7Z494 1330 aa8.99□□□□□ -0.97
SNHG1-212ENST00000539975 STRCP1A6NGW2 1772 aa8.99□□□□□ -0.97
SNHG1-212ENST00000539975 BRINP3Q76B58 766 aa8.98□□□□□ -0.97
SNHG1-212ENST00000539975 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
SNHG1-212ENST00000539975 ORAI2Q96SN7 254 aa8.98□□□□□ -0.97
SNHG1-212ENST00000539975 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
SNHG1-212ENST00000539975 KNDC1Q76NI1 1749 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 C1orf167Q5SNV9 1468 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 DPYSL4O14531 572 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 FOXO3O43524 673 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 CDAN1Q8IWY9 1227 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 PMFBP1Q8TBY8 1022 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
SNHG1-212ENST00000539975 LRRC59Q96AG4 307 aaKnown RBP8.97□□□□□ -0.97
SNHG1-212ENST00000539975 ATAD2Q6PL18 1390 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 MST1RQ04912 1400 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 ANKARQ7Z5J8 1434 aa8.97□□□□□ -0.97
SNHG1-212ENST00000539975 CDC42BPGQ6DT37 1551 aa8.96□□□□□ -0.97
SNHG1-212ENST00000539975 HSPA5P11021 654 aaKnown RBP8.96□□□□□ -0.98
SNHG1-212ENST00000539975 LMOD2Q6P5Q4 547 aa8.96□□□□□ -0.98
SNHG1-212ENST00000539975 ZNF687Q8N1G0 1237 aa8.96□□□□□ -0.98
SNHG1-212ENST00000539975 PUS7Q96PZ0 661 aaKnown RBP8.96□□□□□ -0.98
SNHG1-212ENST00000539975 TERF2IPQ9NYB0 399 aa8.96□□□□□ -0.98
SNHG1-212ENST00000539975 SBNO2Q9Y2G9 1366 aa8.96□□□□□ -0.98
SNHG1-212ENST00000539975 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-212ENST00000539975 POTEB3A0JP26 581 aa8.95□□□□□ -0.98
SNHG1-212ENST00000539975 HSPA1LP34931 641 aa8.95□□□□□ -0.98
SNHG1-212ENST00000539975 POTEBQ6S5H4 581 aa8.95□□□□□ -0.98
SNHG1-212ENST00000539975 KRT28Q7Z3Y7 464 aa8.95□□□□□ -0.98
SNHG1-212ENST00000539975 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-212ENST00000539975 CABP1Q9NZU7 370 aa8.95□□□□□ -0.98
SNHG1-212ENST00000539975 PTGER2P43116 358 aa8.94□□□□□ -0.98
SNHG1-212ENST00000539975 PDIA6Q15084 440 aa8.94□□□□□ -0.98
SNHG1-212ENST00000539975 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
SNHG1-212ENST00000539975 PLEKHG3A1L390 1219 aa8.93□□□□□ -0.98
SNHG1-212ENST00000539975 PBX2P40425 430 aa8.93□□□□□ -0.98
SNHG1-212ENST00000539975 TESK2Q96S53 571 aa8.93□□□□□ -0.98
SNHG1-212ENST00000539975 ACEP12821 1306 aa8.93□□□□□ -0.98
SNHG1-212ENST00000539975 TULP4Q9NRJ4 1543 aa8.93□□□□□ -0.98
SNHG1-212ENST00000539975 NALCNQ8IZF0 1738 aa8.93□□□□□ -0.98
SNHG1-212ENST00000539975 ARHGEF28Q8N1W1 1705 aaKnown RBP8.92□□□□□ -0.98
SNHG1-212ENST00000539975 ADGRB2O60241 1585 aa8.92□□□□□ -0.98
SNHG1-212ENST00000539975 PPIP5K1Q6PFW1 1433 aa8.92□□□□□ -0.98
SNHG1-212ENST00000539975 NINLQ9Y2I6 1382 aa8.92□□□□□ -0.98
SNHG1-212ENST00000539975 FOSBP53539 338 aa8.92□□□□□ -0.98
SNHG1-212ENST00000539975 XPCQ01831 940 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms