RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 MAP3K19Q56UN5 1328 aa23.63■■□□□ 1.37
HTATSF1-204ENST00000535601 PEAK1Q9H792 1746 aa23.62■■□□□ 1.37
HTATSF1-204ENST00000535601 ZBTB7CA1YPR0 619 aa23.61■■□□□ 1.37
HTATSF1-204ENST00000535601 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
HTATSF1-204ENST00000535601 NALCNQ8IZF0 1738 aa23.61■■□□□ 1.37
HTATSF1-204ENST00000535601 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
HTATSF1-204ENST00000535601 ESCO1Q5FWF5 840 aa23.6■■□□□ 1.37
HTATSF1-204ENST00000535601 LTV1Q96GA3 475 aaPredicted RBP23.6■■□□□ 1.37
HTATSF1-204ENST00000535601 SSH2Q76I76 1423 aa23.6■■□□□ 1.37
HTATSF1-204ENST00000535601 ABTB2Q8N961 1025 aa23.59■■□□□ 1.37
HTATSF1-204ENST00000535601 SMC4Q9NTJ3 1288 aa23.59■■□□□ 1.37
HTATSF1-204ENST00000535601 DLG5Q8TDM6 1919 aa23.59■■□□□ 1.37
HTATSF1-204ENST00000535601 SSH1Q8WYL5 1049 aa23.59■■□□□ 1.37
HTATSF1-204ENST00000535601 PNNQ9H307 717 aaKnown RBP23.57■■□□□ 1.36
HTATSF1-204ENST00000535601 ZNF142P52746 1687 aaPredicted RBP23.57■■□□□ 1.36
HTATSF1-204ENST00000535601 HSPA2P54652 639 aa23.57■■□□□ 1.36
HTATSF1-204ENST00000535601 ORAI2Q96SN7 254 aa23.57■■□□□ 1.36
HTATSF1-204ENST00000535601 IGHDP01880 384 aa23.56■■□□□ 1.36
HTATSF1-204ENST00000535601 AMPHP49418 695 aa23.56■■□□□ 1.36
HTATSF1-204ENST00000535601 TSPYL6Q8N831 410 aa23.56■■□□□ 1.36
HTATSF1-204ENST00000535601 PIK3C2AO00443 1686 aa23.56■■□□□ 1.36
HTATSF1-204ENST00000535601 PHF8Q9UPP1 1060 aa23.56■■□□□ 1.36
HTATSF1-204ENST00000535601 NPHP4O75161 1426 aaPredicted RBP23.55■■□□□ 1.36
HTATSF1-204ENST00000535601 FOXO3O43524 673 aa23.55■■□□□ 1.36
HTATSF1-204ENST00000535601 KDM2BQ8NHM5 1336 aa23.55■■□□□ 1.36
HTATSF1-204ENST00000535601 RGS3P49796 1198 aa23.54■■□□□ 1.36
HTATSF1-204ENST00000535601 MCM10Q7L590 875 aa23.54■■□□□ 1.36
HTATSF1-204ENST00000535601 FMN2Q9NZ56 1722 aa23.54■■□□□ 1.36
HTATSF1-204ENST00000535601 MSH5O43196 834 aa23.54■■□□□ 1.36
HTATSF1-204ENST00000535601 LMOD2Q6P5Q4 547 aa23.54■■□□□ 1.36
HTATSF1-204ENST00000535601 PIK3R4Q99570 1358 aa23.52■■□□□ 1.36
HTATSF1-204ENST00000535601 TTC21AQ8NDW8 1320 aa23.52■■□□□ 1.36
HTATSF1-204ENST00000535601 PDE3AQ14432 1141 aa23.51■■□□□ 1.35
HTATSF1-204ENST00000535601 KRT24Q2M2I5 525 aa23.51■■□□□ 1.35
HTATSF1-204ENST00000535601 MBIPQ9NS73 344 aa23.51■■□□□ 1.35
HTATSF1-204ENST00000535601 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
HTATSF1-204ENST00000535601 USP31Q70CQ4 1352 aa23.51■■□□□ 1.35
HTATSF1-204ENST00000535601 USHBP1Q8N6Y0 703 aa23.51■■□□□ 1.35
HTATSF1-204ENST00000535601 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
HTATSF1-204ENST00000535601 PSME1Q06323 249 aa23.49■■□□□ 1.35
HTATSF1-204ENST00000535601 FTSJ3Q8IY81 847 aaKnown RBP23.49■■□□□ 1.35
HTATSF1-204ENST00000535601 MIS18AQ9NYP9 233 aa23.49■■□□□ 1.35
HTATSF1-204ENST00000535601 TRIM27P14373 513 aa23.49■■□□□ 1.35
HTATSF1-204ENST00000535601 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
HTATSF1-204ENST00000535601 PCDHB15Q9Y5E8 787 aa23.48■■□□□ 1.35
HTATSF1-204ENST00000535601 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
HTATSF1-204ENST00000535601 EYA1Q99502 592 aa23.48■■□□□ 1.35
HTATSF1-204ENST00000535601 ZKSCAN2Q63HK3 967 aa23.47■■□□□ 1.35
HTATSF1-204ENST00000535601 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
HTATSF1-204ENST00000535601 C8orf58Q8NAV2 365 aa23.46■■□□□ 1.35
HTATSF1-204ENST00000535601 IL16Q14005 1332 aa23.46■■□□□ 1.35
HTATSF1-204ENST00000535601 ANKARQ7Z5J8 1434 aa23.46■■□□□ 1.35
HTATSF1-204ENST00000535601 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.34
HTATSF1-204ENST00000535601 ITPRIPQ8IWB1 547 aa23.45■■□□□ 1.34
HTATSF1-204ENST00000535601 DZIP1LQ8IYY4 767 aaKnown RBP23.45■■□□□ 1.34
HTATSF1-204ENST00000535601 PDE4AP27815 886 aa23.44■■□□□ 1.34
HTATSF1-204ENST00000535601 FLT4P35916 1363 aa23.44■■□□□ 1.34
HTATSF1-204ENST00000535601 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
HTATSF1-204ENST00000535601 MARF1Q9Y4F3 1742 aaKnown RBP23.43■■□□□ 1.34
HTATSF1-204ENST00000535601 HOXC9P31274 260 aa23.43■■□□□ 1.34
HTATSF1-204ENST00000535601 MTHFSDQ2M296 383 aaKnown RBP23.43■■□□□ 1.34
HTATSF1-204ENST00000535601 SBNO1A3KN83 1393 aa23.43■■□□□ 1.34
HTATSF1-204ENST00000535601 VAMP4O75379 141 aa23.41■■□□□ 1.34
HTATSF1-204ENST00000535601 TMEM57Q8N5G2 664 aa23.41■■□□□ 1.34
HTATSF1-204ENST00000535601 GNAI1P63096 354 aa23.41■■□□□ 1.34
HTATSF1-204ENST00000535601 MVPQ14764 893 aaKnown RBP23.41■■□□□ 1.34
HTATSF1-204ENST00000535601 ATF7IPQ6VMQ6 1270 aa23.4■■□□□ 1.34
HTATSF1-204ENST00000535601 IFT57Q9NWB7 429 aa23.39■■□□□ 1.34
HTATSF1-204ENST00000535601 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
HTATSF1-204ENST00000535601 TWISTNBQ3B726 338 aaPredicted RBP23.39■■□□□ 1.33
HTATSF1-204ENST00000535601 CFAP44Q96MT7 982 aa23.38■■□□□ 1.33
HTATSF1-204ENST00000535601 RGPD1P0DJD0 1748 aa23.37■■□□□ 1.33
HTATSF1-204ENST00000535601 LRRC59Q96AG4 307 aaKnown RBP23.36■■□□□ 1.33
HTATSF1-204ENST00000535601 BACH2Q9BYV9 841 aa23.35■■□□□ 1.33
HTATSF1-204ENST00000535601 CT47B1P0C2W7 299 aaPredicted RBP23.35■■□□□ 1.33
HTATSF1-204ENST00000535601 LMOD3Q0VAK6 560 aa23.35■■□□□ 1.33
HTATSF1-204ENST00000535601 C1orf115Q9H7X2 142 aa23.34■■□□□ 1.33
HTATSF1-204ENST00000535601 LTN1O94822 1766 aa23.34■■□□□ 1.33
HTATSF1-204ENST00000535601 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.33
HTATSF1-204ENST00000535601 CALD1Q05682 793 aaKnown RBP23.33■■□□□ 1.33
HTATSF1-204ENST00000535601 MRPL50Q8N5N7 158 aaKnown RBP23.33■■□□□ 1.32
HTATSF1-204ENST00000535601 ARHGEF10O15013 1369 aa23.32■■□□□ 1.32
HTATSF1-204ENST00000535601 TMEM94Q12767 1356 aa23.31■■□□□ 1.32
HTATSF1-204ENST00000535601 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
HTATSF1-204ENST00000535601 STRCP1A6NGW2 1772 aa23.31■■□□□ 1.32
HTATSF1-204ENST00000535601 NBPF6Q5VWK0 638 aa23.3■■□□□ 1.32
HTATSF1-204ENST00000535601 NBPF4Q96M43 638 aa23.3■■□□□ 1.32
HTATSF1-204ENST00000535601 NECTIN2Q92692 538 aa23.3■■□□□ 1.32
HTATSF1-204ENST00000535601 KRT28Q7Z3Y7 464 aa23.3■■□□□ 1.32
HTATSF1-204ENST00000535601 RTF1Q92541 710 aaKnown RBP23.3■■□□□ 1.32
HTATSF1-204ENST00000535601 KIF16BQ96L93 1317 aa23.29■■□□□ 1.32
HTATSF1-204ENST00000535601 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
HTATSF1-204ENST00000535601 ZC3H6P61129 1189 aaKnown RBP23.29■■□□□ 1.32
HTATSF1-204ENST00000535601 ALDH1L2Q3SY69 923 aa23.28■■□□□ 1.32
HTATSF1-204ENST00000535601 CABLES1Q8TDN4 633 aa23.28■■□□□ 1.32
HTATSF1-204ENST00000535601 GCP02774 474 aa23.27■■□□□ 1.32
HTATSF1-204ENST00000535601 MS4A1P11836 297 aa23.27■■□□□ 1.32
HTATSF1-204ENST00000535601 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
HTATSF1-204ENST00000535601 KDRP35968 1356 aa23.27■■□□□ 1.32
HTATSF1-204ENST00000535601 CHL1O00533 1208 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms