RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 ATF7IPQ6VMQ6 1270 aa7.42□□□□□ -1.22
RDX-213ENST00000532461 DDX19BQ9UMR2 479 aa7.42□□□□□ -1.22
RDX-213ENST00000532461 NWD1Q149M9 1564 aa7.42□□□□□ -1.22
RDX-213ENST00000532461 TRIM27P14373 513 aa7.42□□□□□ -1.22
RDX-213ENST00000532461 SKAP1Q86WV1 359 aa7.42□□□□□ -1.22
RDX-213ENST00000532461 RRP7AQ9Y3A4 280 aaKnown RBP7.42□□□□□ -1.22
RDX-213ENST00000532461 ABCC4O15439 1325 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 SSH1Q8WYL5 1049 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 LTN1O94822 1766 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 MED1Q15648 1581 aaPredicted RBP7.41□□□□□ -1.22
RDX-213ENST00000532461 NCOA3Q9Y6Q9 1424 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 EXOSC9Q06265 439 aaKnown RBP7.41□□□□□ -1.22
RDX-213ENST00000532461 STK26Q9P289 416 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 CCDC61Q9Y6R9 512 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 KDRP35968 1356 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 KIAA0232Q92628 1395 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 ADAMTS7Q9UKP4 1686 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 RGS12O14924 1447 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 KDM3BQ7LBC6 1761 aa7.41□□□□□ -1.22
RDX-213ENST00000532461 TBC1D32Q96NH3 1257 aa7.4□□□□□ -1.22
RDX-213ENST00000532461 LMO7Q8WWI1 1683 aa7.4□□□□□ -1.22
RDX-213ENST00000532461 PRR36Q9H6K5 1346 aa7.4□□□□□ -1.22
RDX-213ENST00000532461 DEKP35659 375 aaKnown RBP7.4□□□□□ -1.22
RDX-213ENST00000532461 TNNT2P45379 298 aaPredicted RBP7.4□□□□□ -1.22
RDX-213ENST00000532461 ARHGEF10O15013 1369 aa7.4□□□□□ -1.22
RDX-213ENST00000532461 RIPK4P57078 832 aa7.4□□□□□ -1.23
RDX-213ENST00000532461 WAPLQ7Z5K2 1190 aa7.4□□□□□ -1.23
RDX-213ENST00000532461 NUDT16Q96DE0 195 aaKnown RBP7.4□□□□□ -1.23
RDX-213ENST00000532461 SIPA1L3O60292 1781 aaPredicted RBP7.39□□□□□ -1.23
RDX-213ENST00000532461 IPO8O15397 1037 aaKnown RBP7.39□□□□□ -1.23
RDX-213ENST00000532461 TNNQ9UQP3 1299 aa7.39□□□□□ -1.23
RDX-213ENST00000532461 CEP170BQ9Y4F5 1589 aaPredicted RBP7.39□□□□□ -1.23
RDX-213ENST00000532461 VAMP4O75379 141 aa7.39□□□□□ -1.23
RDX-213ENST00000532461 MRPL50Q8N5N7 158 aaKnown RBP7.39□□□□□ -1.23
RDX-213ENST00000532461 PDZRN3Q9UPQ7 1066 aa7.39□□□□□ -1.23
RDX-213ENST00000532461 TTC21AQ8NDW8 1320 aa7.39□□□□□ -1.23
RDX-213ENST00000532461 LMOD3Q0VAK6 560 aa7.39□□□□□ -1.23
RDX-213ENST00000532461 CHMP4BQ9H444 224 aaKnown RBP7.39□□□□□ -1.23
RDX-213ENST00000532461 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
RDX-213ENST00000532461 ADAMTSL3P82987 1691 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 CRB1P82279 1406 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 GNAI1P63096 354 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 NUCB1Q02818 461 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 TSR2Q969E8 191 aaKnown RBP7.38□□□□□ -1.23
RDX-213ENST00000532461 CFAP44Q96MT7 982 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 RTL1A6NKG5 1358 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 CRYBG1Q9Y4K1 1723 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 NOB1Q9ULX3 412 aaKnown RBP7.38□□□□□ -1.23
RDX-213ENST00000532461 TTC21BQ7Z4L5 1316 aa7.38□□□□□ -1.23
RDX-213ENST00000532461 ZBTB7BO15156 539 aaPredicted RBP7.37□□□□□ -1.23
RDX-213ENST00000532461 CANXP27824 592 aaKnown RBP7.37□□□□□ -1.23
RDX-213ENST00000532461 PHACTR3Q96KR7 559 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 MST1RQ04912 1400 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 SEC24BO95487 1268 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 PRKAR2BP31323 418 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 SAFB2Q14151 953 aaKnown RBP eCLIP7.37□□□□□ -1.23
RDX-213ENST00000532461 SMC4Q9NTJ3 1288 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 TBX22Q9Y458 520 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 NCAPD2Q15021 1401 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 TRPM3Q9HCF6 1732 aaPredicted RBP7.37□□□□□ -1.23
RDX-213ENST00000532461 NFAT5O94916 1531 aa7.37□□□□□ -1.23
RDX-213ENST00000532461 FRAT1Q92837 279 aaPredicted RBP7.37□□□□□ -1.23
RDX-213ENST00000532461 U2SURPO15042 1029 aaKnown RBP7.36□□□□□ -1.23
RDX-213ENST00000532461 NEUROD2Q15784 382 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 PXDNLA1KZ92 1463 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 ABCC6O95255 1503 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 NME9Q86XW9 330 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 TMEM57Q8N5G2 664 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 STAG3Q9UJ98 1225 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 SBNO1A3KN83 1393 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 ATP10DQ9P241 1426 aa7.36□□□□□ -1.23
RDX-213ENST00000532461 RBM25P49756 843 aaKnown RBP7.35□□□□□ -1.23
RDX-213ENST00000532461 GCC1Q96CN9 775 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 COG3Q96JB2 828 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 SOS1Q07889 1333 aaPredicted RBP7.35□□□□□ -1.23
RDX-213ENST00000532461 DDIT3P35638 169 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 RGS3P49796 1198 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 NPM2Q86SE8 214 aaKnown RBP7.35□□□□□ -1.23
RDX-213ENST00000532461 FTSJ3Q8IY81 847 aaKnown RBP7.35□□□□□ -1.23
RDX-213ENST00000532461 MBIPQ9NS73 344 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 CHL1O00533 1208 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 NFKBIBQ15653 356 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 INTS3Q68E01 1043 aaKnown RBP7.35□□□□□ -1.23
RDX-213ENST00000532461 BCL11AQ9H165 835 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 EMILIN1Q9Y6C2 1016 aa7.35□□□□□ -1.23
RDX-213ENST00000532461 LTKP29376 864 aa7.34□□□□□ -1.23
RDX-213ENST00000532461 RTL5Q5HYW3 569 aaPredicted RBP7.34□□□□□ -1.23
RDX-213ENST00000532461 SLIT3O75094 1523 aa7.34□□□□□ -1.23
RDX-213ENST00000532461 NEFMP07197 916 aa7.34□□□□□ -1.23
RDX-213ENST00000532461 BMP2KLQ5H9B9 411 aa7.34□□□□□ -1.23
RDX-213ENST00000532461 KIF1AQ12756 1690 aa7.34□□□□□ -1.23
RDX-213ENST00000532461 HTATSF1O43719 755 aaKnown RBP7.33□□□□□ -1.24
RDX-213ENST00000532461 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
RDX-213ENST00000532461 TXNDC2Q86VQ3 553 aa7.33□□□□□ -1.24
RDX-213ENST00000532461 SNX21Q969T3 373 aa7.33□□□□□ -1.24
RDX-213ENST00000532461 EIF4A2Q14240 407 aaKnown RBP7.33□□□□□ -1.24
RDX-213ENST00000532461 BECN1Q14457 450 aa7.33□□□□□ -1.24
RDX-213ENST00000532461 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
RDX-213ENST00000532461 BABAM1Q9NWV8 329 aa7.33□□□□□ -1.24
RDX-213ENST00000532461 OVOS2A0A0G2JMS6 1433 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms