RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 PIK3C2AO00443 1686 aa24.58■■□□□ 1.53
UBXN1-210ENST00000529640 PTGER2P43116 358 aa24.57■■□□□ 1.52
UBXN1-210ENST00000529640 SRPK2P78362 688 aaKnown RBP24.57■■□□□ 1.52
UBXN1-210ENST00000529640 TOM1L2Q6ZVM7 507 aa24.57■■□□□ 1.52
UBXN1-210ENST00000529640 PROM2Q8N271 834 aa24.57■■□□□ 1.52
UBXN1-210ENST00000529640 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
UBXN1-210ENST00000529640 ZBTB7CA1YPR0 619 aa24.56■■□□□ 1.52
UBXN1-210ENST00000529640 ZBTB7AO95365 584 aa24.56■■□□□ 1.52
UBXN1-210ENST00000529640 RGPD5Q99666 1765 aa24.55■■□□□ 1.52
UBXN1-210ENST00000529640 NLRP6P59044 892 aa24.55■■□□□ 1.52
UBXN1-210ENST00000529640 MARCH10Q8NA82 808 aaPredicted RBP24.55■■□□□ 1.52
UBXN1-210ENST00000529640 ZNF784Q8NCA9 323 aaPredicted RBP24.55■■□□□ 1.52
UBXN1-210ENST00000529640 CDCA7Q9BWT1 371 aaPredicted RBP24.55■■□□□ 1.52
UBXN1-210ENST00000529640 WDR17Q8IZU2 1322 aa24.55■■□□□ 1.52
UBXN1-210ENST00000529640 CABP2Q9NPB3 220 aa24.53■■□□□ 1.52
UBXN1-210ENST00000529640 CENPJQ9HC77 1338 aaPredicted RBP24.53■■□□□ 1.52
UBXN1-210ENST00000529640 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.52
UBXN1-210ENST00000529640 NBPF1Q3BBV0 1214 aa24.51■■□□□ 1.51
UBXN1-210ENST00000529640 STK32BQ9NY57 414 aa24.51■■□□□ 1.51
UBXN1-210ENST00000529640 TXNRD1Q16881 649 aa24.5■■□□□ 1.51
UBXN1-210ENST00000529640 ATF5Q9Y2D1 282 aaPredicted RBP24.5■■□□□ 1.51
UBXN1-210ENST00000529640 AXIN2Q9Y2T1 843 aa24.5■■□□□ 1.51
UBXN1-210ENST00000529640 CABP1Q9NZU7 370 aa24.49■■□□□ 1.51
UBXN1-210ENST00000529640 SLC15A2Q16348 729 aa24.48■■□□□ 1.51
UBXN1-210ENST00000529640 NHSQ6T4R5 1651 aa24.48■■□□□ 1.51
UBXN1-210ENST00000529640 SYT17Q9BSW7 474 aa24.48■■□□□ 1.51
UBXN1-210ENST00000529640 FHDC1Q9C0D6 1143 aaPredicted RBP24.48■■□□□ 1.51
UBXN1-210ENST00000529640 UTRNP46939 3433 aa24.48■■□□□ 1.51
UBXN1-210ENST00000529640 TRPM1Q7Z4N2 1603 aa24.47■■□□□ 1.51
UBXN1-210ENST00000529640 SGIP1Q9BQI5 828 aa24.46■■□□□ 1.51
UBXN1-210ENST00000529640 CARD10Q9BWT7 1032 aa24.46■■□□□ 1.51
UBXN1-210ENST00000529640 MTFR1LQ9H019 292 aa24.46■■□□□ 1.51
UBXN1-210ENST00000529640 ARHGEF25Q86VW2 580 aa24.45■■□□□ 1.5
UBXN1-210ENST00000529640 PAPPAQ13219 1627 aa24.45■■□□□ 1.5
UBXN1-210ENST00000529640 TNS2Q63HR2 1409 aa24.44■■□□□ 1.5
UBXN1-210ENST00000529640 ABCC6O95255 1503 aa24.44■■□□□ 1.5
UBXN1-210ENST00000529640 CCDC7Q96M83 1385 aa24.42■■□□□ 1.5
UBXN1-210ENST00000529640 NFAT5O94916 1531 aa24.42■■□□□ 1.5
UBXN1-210ENST00000529640 KCNH5Q8NCM2 988 aa24.42■■□□□ 1.5
UBXN1-210ENST00000529640 EXOC5O00471 708 aa24.41■■□□□ 1.5
UBXN1-210ENST00000529640 CSB-PGBD3P0DP91 1061 aa24.41■■□□□ 1.5
UBXN1-210ENST00000529640 MAP3K5Q99683 1374 aa24.41■■□□□ 1.5
UBXN1-210ENST00000529640 TTC21BQ7Z4L5 1316 aa24.38■■□□□ 1.49
UBXN1-210ENST00000529640 BTAF1O14981 1849 aa24.38■■□□□ 1.49
UBXN1-210ENST00000529640 SENP3-EIF4A1A0A087X0R7 540 aa24.38■■□□□ 1.49
UBXN1-210ENST00000529640 C1QTNF8P60827 252 aa24.37■■□□□ 1.49
UBXN1-210ENST00000529640 ARXQ96QS3 562 aa24.37■■□□□ 1.49
UBXN1-210ENST00000529640 EVC2Q86UK5 1308 aa24.36■■□□□ 1.49
UBXN1-210ENST00000529640 TTC21AQ8NDW8 1320 aa24.36■■□□□ 1.49
UBXN1-210ENST00000529640 ZNF692Q9BU19 519 aaPredicted RBP24.36■■□□□ 1.49
UBXN1-210ENST00000529640 SOX12O15370 315 aa24.34■■□□□ 1.49
UBXN1-210ENST00000529640 QSER1Q2KHR3 1735 aa24.34■■□□□ 1.49
UBXN1-210ENST00000529640 KAT6BQ8WYB5 2073 aa24.33■■□□□ 1.49
UBXN1-210ENST00000529640 USP54Q70EL1 1684 aa24.33■■□□□ 1.49
UBXN1-210ENST00000529640 MON2Q7Z3U7 1717 aa24.32■■□□□ 1.48
UBXN1-210ENST00000529640 COL24A1Q17RW2 1714 aa24.32■■□□□ 1.48
UBXN1-210ENST00000529640 ACSBG1Q96GR2 724 aa24.31■■□□□ 1.48
UBXN1-210ENST00000529640 LTN1O94822 1766 aa24.31■■□□□ 1.48
UBXN1-210ENST00000529640 ZNF827Q17R98 1081 aa24.28■■□□□ 1.48
UBXN1-210ENST00000529640 ERBB3P21860 1342 aa24.28■■□□□ 1.48
UBXN1-210ENST00000529640 KTN1Q86UP2 1357 aaKnown RBP24.27■■□□□ 1.48
UBXN1-210ENST00000529640 IL2RBP14784 551 aa24.25■■□□□ 1.47
UBXN1-210ENST00000529640 GPR162Q16538 588 aa24.25■■□□□ 1.47
UBXN1-210ENST00000529640 LRRC4BQ9NT99 713 aa24.25■■□□□ 1.47
UBXN1-210ENST00000529640 TUBGCP6Q96RT7 1819 aa24.25■■□□□ 1.47
UBXN1-210ENST00000529640 NLRP2Q9NX02 1062 aa24.24■■□□□ 1.47
UBXN1-210ENST00000529640 USP31Q70CQ4 1352 aa24.24■■□□□ 1.47
UBXN1-210ENST00000529640 SLC16A10Q8TF71 515 aa24.23■■□□□ 1.47
UBXN1-210ENST00000529640 AKT1S1Q96B36 256 aa24.22■■□□□ 1.47
UBXN1-210ENST00000529640 SHANK3Q9BYB0 1731 aa24.21■■□□□ 1.47
UBXN1-210ENST00000529640 GIGYF1O75420 1035 aaPredicted RBP24.21■■□□□ 1.47
UBXN1-210ENST00000529640 FAM208AQ9UK61 1670 aaKnown RBP24.19■■□□□ 1.46
UBXN1-210ENST00000529640 POLD1P28340 1107 aa24.19■■□□□ 1.46
UBXN1-210ENST00000529640 SLC27A3Q5K4L6 730 aa24.19■■□□□ 1.46
UBXN1-210ENST00000529640 LY75O60449 1722 aa24.18■■□□□ 1.46
UBXN1-210ENST00000529640 PNPLA7Q6ZV29 1317 aa24.17■■□□□ 1.46
UBXN1-210ENST00000529640 KLHL34Q8N239 644 aa24.17■■□□□ 1.46
UBXN1-210ENST00000529640 ANKRD24Q8TF21 1146 aa24.17■■□□□ 1.46
UBXN1-210ENST00000529640 L3MBTL2Q969R5 705 aa24.17■■□□□ 1.46
UBXN1-210ENST00000529640 ROCK2O75116 1388 aaKnown RBP24.16■■□□□ 1.46
UBXN1-210ENST00000529640 GOLGB1Q14789 3259 aaKnown RBP24.16■■□□□ 1.46
UBXN1-210ENST00000529640 CD163L1Q9NR16 1453 aa24.16■■□□□ 1.46
UBXN1-210ENST00000529640 IFFO2Q5TF58 517 aa24.16■■□□□ 1.46
UBXN1-210ENST00000529640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.16■■□□□ 1.46
UBXN1-210ENST00000529640 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
UBXN1-210ENST00000529640 NME9Q86XW9 330 aa24.14■■□□□ 1.45
UBXN1-210ENST00000529640 DOT1LQ8TEK3 1739 aa24.14■■□□□ 1.45
UBXN1-210ENST00000529640 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
UBXN1-210ENST00000529640 NLGN2Q8NFZ4 835 aa24.12■■□□□ 1.45
UBXN1-210ENST00000529640 CEP350Q5VT06 3117 aa24.11■■□□□ 1.45
UBXN1-210ENST00000529640 TFCP2L1Q9NZI6 479 aa24.11■■□□□ 1.45
UBXN1-210ENST00000529640 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
UBXN1-210ENST00000529640 ANKRD36BQ8N2N9 1353 aa24.08■■□□□ 1.45
UBXN1-210ENST00000529640 DDX54Q8TDD1 881 aaKnown RBP24.08■■□□□ 1.45
UBXN1-210ENST00000529640 NSD2O96028 1365 aa24.06■■□□□ 1.44
UBXN1-210ENST00000529640 GRIN3BO60391 1043 aa24.06■■□□□ 1.44
UBXN1-210ENST00000529640 KCNQ4P56696 695 aa24.06■■□□□ 1.44
UBXN1-210ENST00000529640 YBX3P16989 372 aaKnown RBP eCLIP24.05■■□□□ 1.44
UBXN1-210ENST00000529640 HDGFL2Q7Z4V5 671 aaPredicted RBP24.05■■□□□ 1.44
UBXN1-210ENST00000529640 IP6K1Q92551 441 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms